FFCP PHASE1:Hg19::chr2:176972047..176972063,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3237 | |EntrezGene=3237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5134 | |HGNC=5134 | ||
|TSSclassifier=strong | |||
|UniProt=P31277 | |UniProt=P31277 | ||
|association_with_transcript=-20bp_to_NM_021192,uc002uki.2_5end | |association_with_transcript=-20bp_to_NM_021192,uc002uki.2_5end | ||
|cluster_id=chr2:176972047..176972063,+ | |||
|coexpression_cluster_id=C1885 | |||
|description=CAGE_peak_7_at_HOXD11_5end | |description=CAGE_peak_7_at_HOXD11_5end | ||
|id=chr2:176972047..176972063,+ | |id=chr2:176972047..176972063,+ | ||
|ontology_enrichment_celltype=CL:1000497!2.89e-08!18;CL:0002518!2.89e-08!18;CL:0002620!1.90e-07!23;CL:1000507!5.41e-07!12;CL:1000494!5.41e-07!12 | |ontology_enrichment_celltype=CL:1000497!2.89e-08!18;CL:0002518!2.89e-08!18;CL:0002620!1.90e-07!23;CL:1000507!5.41e-07!12;CL:1000494!5.41e-07!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.55e-16!143;DOID:305!1.58e-12!106;DOID:14566!1.96e-09!239;DOID:162!8.20e-09!235;DOID:1749!3.61e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:171;3.44e-10;10!DOID:17;2.60e-07;5!DOID:450;2.60e-07;5!DOID:66;2.60e-07;5!DOID:423;2.60e-07;5!DOID:0080000;2.60e-07;5!DOID:11722;2.60e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.39e-10,10;DOID:0050687,4.59e-09,143;DOID:17,2.73e-07,5;DOID:450,2.73e-07,5;DOID:66,2.73e-07,5;DOID:423,2.73e-07,5;DOID:0080000,2.73e-07,5;DOID:11722,2.73e-07,5;DOID:14566,5.80e-07,239;DOID:305,9.81e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.55e-13!9;UBERON:0000489!2.80e-11!32;UBERON:0006554!3.90e-11!44;UBERON:0001008!9.52e-11!45;UBERON:0002113!1.23e-09!27;UBERON:0003918!1.23e-09!27;UBERON:0005095!1.23e-09!27;UBERON:0007687!1.23e-09!27;UBERON:0003064!1.04e-07!37;UBERON:0004876!3.21e-07!20;UBERON:0009773!5.41e-07!12;UBERON:0001231!5.41e-07!12;UBERON:0004810!5.41e-07!12 | |ontology_enrichment_uberon=UBERON:0001737!3.55e-13!9;UBERON:0000489!2.80e-11!32;UBERON:0006554!3.90e-11!44;UBERON:0001008!9.52e-11!45;UBERON:0002113!1.23e-09!27;UBERON:0003918!1.23e-09!27;UBERON:0005095!1.23e-09!27;UBERON:0007687!1.23e-09!27;UBERON:0003064!1.04e-07!37;UBERON:0004876!3.21e-07!20;UBERON:0009773!5.41e-07!12;UBERON:0001231!5.41e-07!12;UBERON:0004810!5.41e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.18e-10;4!UBERON:0000923;4.18e-10;4!UBERON:0010316;4.18e-10;4!UBERON:0005291;4.18e-10;4!UBERON:0000489;1.95e-09;29!UBERON:0002113;3.03e-09;24!UBERON:0011143;3.03e-09;24!UBERON:0006554;4.54e-09;30!UBERON:0001008;4.54e-09;30!UBERON:0002050;3.70e-08;5!UBERON:0005423;3.70e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,9.63e-09,31;UBERON:0002113,1.82e-08,26;UBERON:0003918,1.82e-08,26;UBERON:0011143,1.82e-08,26;UBERON:0005095,1.82e-08,26;UBERON:0007687,1.82e-08,26 | |||
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| ||
|short_description=p7@HOXD11 | |short_description=p7@HOXD11 | ||
}} | }} |
Latest revision as of 08:48, 18 September 2015
Short description: | p7@HOXD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HOXD11_5end |
Coexpression cluster: | C1885_neuroectodermal_nonsmall_small_neuroblastoma_embryonic_merkel_hairy |
Association with transcript: | -20bp_to_NM_021192, uc002uki.2_5end |
EntrezGene: | HOXD11 |
HGNC: | 5134 |
UniProt: | P31277 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 9.63e-09 | 31 |
kidney | 1.82e-08 | 26 |
kidney mesenchyme | 1.82e-08 | 26 |
upper urinary tract | 1.82e-08 | 26 |
kidney rudiment | 1.82e-08 | 26 |
kidney field | 1.82e-08 | 26 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.39e-10 | 10 |
cell type cancer | 4.59e-09 | 143 |
musculoskeletal system disease | 2.73e-07 | 5 |
myotonic disease | 2.73e-07 | 5 |
muscle tissue disease | 2.73e-07 | 5 |
myopathy | 2.73e-07 | 5 |
muscular disease | 2.73e-07 | 5 |
myotonic dystrophy | 2.73e-07 | 5 |
disease of cellular proliferation | 5.80e-07 | 239 |
carcinoma | 9.81e-07 | 106 |