FFCP PHASE1:Hg19::chr12:4409178..4409221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=894 | |EntrezGene=894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=1583 | |HGNC=1583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_BX647508_5end | |association_with_transcript=-44bp_to_BX647508_5end | ||
|cluster_id=chr12:4409178..4409221,+ | |||
|coexpression_cluster_id=C539 | |||
|description=CAGE_peak_5_at_CCND2_5end | |description=CAGE_peak_5_at_CCND2_5end | ||
|id=chr12:4409178..4409221,+ | |id=chr12:4409178..4409221,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002251;8.92e-08;20!CL:0002159;3.03e-07;14!CL:0002621;4.77e-07;3!CL:0002577;8.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,7.94e-08,20;CL:0002159,2.12e-07,14;CL:0002621,4.71e-07,3;CL:0002577,6.20e-07,3;CL:0002144,8.61e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.70e-07!115;UBERON:0002020!8.53e-07!34;UBERON:0003528!8.53e-07!34;UBERON:0002780!9.32e-07!41;UBERON:0001890!9.32e-07!41;UBERON:0006240!9.32e-07!41;UBERON:0004121!9.42e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.77e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.71e-07,3;UBERON:0004121,8.06e-07,171;UBERON:0000924,8.06e-07,171;UBERON:0006601,8.06e-07,171;UBERON:0010523,8.61e-07,3;UBERON:0001915,8.61e-07,3;UBERON:0001982,8.61e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,1.89515962028049,1.04474251279935,1.72013755551056,0,1.09220686065086,2.37390280405608,0,0,0,0,0,0.975865597581014,0.123121058076788,0,0,0.85870796139317,0.684372125364421,1.12988375635323,2.13957536094264,1.06730766284929,1.02324015707783,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0,0.344745680736619,0.645484683583826,1.35426486594342,0.564727018627814,1.63743690034707,0,0,0.641858054152187,0,0,0,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0.736555271975129,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0.196709770113833,1.17903228824749,1.43921049299656,0.83593247695339,0,0.946895611469467,0,0.779873198196215,0.294605907474837,0.221533894583621,0.270803863765016,1.40900451698243,1.95089021339817,1.31550323682941,0.552700035571697,0.579606171470105,0.14828656316206,0.535081656179426,0,0.453237370790265,0,0,0.506039384039006,0.318565414324097,0,0.950452044448374,0.301150238155546,0.511946444617674,1.24930726552346,0.710331756132051,0,0.403213486449465,0.534880391567015,0.579297615531196,0,0,0.511450247374121,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.261958150995425,2.18577172975525,1.48313777113772,0.649094787309367,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.417989933073621,0.775250277507987,0,1.00416183829401,2.41697590265488,1.52054421143703,3.41686880567437,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,3.05265836499774,0,0.12663051166458,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0.485618833104395,0.842704840213491,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,3.27295344709002,2.58124135850103,0.487894824518382,0.132529768321485,0.69716365721711,0.932949495138334,1.26160425437814,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,3.40225884766739,1.1240175325762,0.904760751704678,3.05541869023148,0,0,0,0.115930404975077,0.352226082707465,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0,0.234004265139238,0.297262324577456,0,1.34385702559088,2.1266264586358,1.25381931783988,0.581267877027924,1.15014803749563,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.129271715757778,0,1.690605505112,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.41151501647669,1.74306691720059,3.09916272664377,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,1.00876629594175,0.591092280605782,0.862510299438069,0.641715181398742,1.52456774533478,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0.426910231213777,1.5156378572313,3.32870879020994,4.83824469327489,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0.241718899183244,5.81468763879526,0.920809889358963,0,0,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0,0,1.72279661398852,1.95018073810956,0,0.676695028044854,0.154048617114644,0.15350367472613,0.275673144969061,0.322260734604821,0,0.340906509664404,0.267096106940212,1.15699440752685,1.53752053892085,0,0.910420027699949,0.464845549297286,0.31481234683064,0,0,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0,0,0.511795582622668,0.855877976067841,0,0,0.359744915166629,1.37268514868027,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0.424216295861138,0,0,0,0.438450885253763,1.73632660280006,0,0.405820753925408,0.30982349809975,0,0.143411352204052,0.0982490410131212,1.426684205925,0.354761064070598,0.211107635297664,0,0,0.349934720244983,1.05844323998063,0.670302275535787,0,0.188287601553558,1.29151611801369,0,0.886860307073351,1.1486170010348,0,0,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0.961416640147258,0,0,0,0,0,0,0,0,1.2700414963433,0.649243880549111,0,0,1.09675927041116,2.50634477090067,0.50787533340481,0,0,0,0.687010689511529,0,0,0,0.390776190804081,0,0,0.270455678475983,0.66614393599564,0,0.561421621224659,0.146508179271894,0,1.11443384277478,0,1.43246690842614,0.593929361665277,1.22864280839693,0,0.844016498463076,0,0,0,0.597743964753209,0.276283915531148,0,0,1.6001024709939,0.622079175323615,0,0,0,0.986434056369336,0,0,1.93866549219044,0.556608588971108,0,0,0,0,0.682760689712998,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,1.31631238292384,0,0.41827123283581,0.0769502585037971,0,0,0,0,0.638002319463839,0.457987967009312,0,0,0.941881538370149,0.166211681900156,0,0.19606253431774,0.167821586975843,0.37950746544837,0,0,0,0,1.08194319871046,0,0.353830258013357,0,3.85477467284809,4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| ||
|short_description=p5@CCND2 | |short_description=p5@CCND2 | ||
}} | }} |
Latest revision as of 08:39, 18 September 2015
Short description: | p5@CCND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCND2_5end |
Coexpression cluster: | C539_teratocarcinoma_diffuse_Gingival_Placental_lymphangiectasia_mycosis_Sebocyte |
Association with transcript: | -44bp_to_BX647508_5end |
EntrezGene: | CCND2 |
HGNC: | 1583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 7.94e-08 | 20 |
general ecto-epithelial cell | 2.12e-07 | 14 |
gingival epithelial cell | 4.71e-07 | 3 |
placental epithelial cell | 6.20e-07 | 3 |
capillary endothelial cell | 8.61e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.71e-07 | 3 |
ectoderm-derived structure | 8.06e-07 | 171 |
ectoderm | 8.06e-07 | 171 |
presumptive ectoderm | 8.06e-07 | 171 |
microcirculatory vessel | 8.61e-07 | 3 |
endothelium of capillary | 8.61e-07 | 3 |
capillary | 8.61e-07 | 3 |