FFCP PHASE1:Hg19::chr12:43946001..43946016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80070 | |EntrezGene=80070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17178 | |HGNC=17178 | ||
|TSSclassifier=strong | |||
|UniProt=P59510,G3V1X8 | |UniProt=P59510,G3V1X8 | ||
|association_with_transcript=-277bp_to_ENST00000389417,ENST00000389420,ENST00000553158,NM_025003,uc010skx.1_5end | |association_with_transcript=-277bp_to_ENST00000389417,ENST00000389420,ENST00000553158,NM_025003,uc010skx.1_5end | ||
|cluster_id=chr12:43946001..43946016,- | |||
|coexpression_cluster_id=C255 | |coexpression_cluster_id=C255 | ||
|description=CAGE_peak_1_at_ADAMTS20_5end | |description=CAGE_peak_1_at_ADAMTS20_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!7.74e-13!5;CL:0000039!9.43e-09!7;CL:0000586!9.43e-09!7;CL:0000064!2.27e-07!3;CL:0005012!2.27e-07!3;CL:0000067!2.27e-07!3;CL:0002304!2.27e-07!3;CL:0000133!5.98e-07!59 | |ontology_enrichment_celltype=CL:0002322!7.74e-13!5;CL:0000039!9.43e-09!7;CL:0000586!9.43e-09!7;CL:0000064!2.27e-07!3;CL:0005012!2.27e-07!3;CL:0000067!2.27e-07!3;CL:0002304!2.27e-07!3;CL:0000133!5.98e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.98e-36;5!CL:0002321;6.89e-30;15!CL:0000333;9.19e-14;5!CL:0000540;1.40e-11;6!CL:0000404;1.40e-11;6!CL:0000039;6.16e-10;7!CL:0000586;6.16e-10;7!CL:0000148;3.93e-07;10 | |ontology_enrichment_celltype_v019=CL:0002322;3.98e-36;5!CL:0002321;6.89e-30;15!CL:0000333;9.19e-14;5!CL:0000540;1.40e-11;6!CL:0000404;1.40e-11;6!CL:0000039;6.16e-10;7!CL:0000586;6.16e-10;7!CL:0000148;3.93e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.33e-36,5;CL:0000540,1.17e-11,6;CL:0000031,1.17e-11,6;CL:0000404,1.17e-11,6;CL:0000133,2.62e-10,59;CL:0000221,5.67e-10,72;CL:0000039,5.89e-10,7;CL:0000586,5.89e-10,7;CL:0000047,7.30e-09,8;CL:0000333,1.65e-07,41;CL:0000148,4.02e-07,10;CL:0000541,4.02e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000031;1.40e-11;6!UBERON:0003918;1.47e-11;10!UBERON:0007687;1.47e-11;10!UBERON:0000358;2.29e-08;1 | |ontology_enrichment_development_v019=CL:0000031;1.40e-11;6!UBERON:0003918;1.47e-11;10!UBERON:0007687;1.47e-11;10!UBERON:0000358;2.29e-08;1 | ||
|ontology_enrichment_disease=DOID:3095!4.02e-13!22;DOID:2994!4.02e-13!22;DOID:169!7.29e-07!6 | |ontology_enrichment_disease=DOID:3095!4.02e-13!22;DOID:2994!4.02e-13!22;DOID:169!7.29e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.68e-15;22!DOID:2994;2.68e-15;22!DOID:169;1.48e-11;6!DOID:171;4.06e-07;10 | |ontology_enrichment_disease_v019=DOID:3095;2.68e-15;22!DOID:2994;2.68e-15;22!DOID:169;1.48e-11;6!DOID:171;4.06e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.56e-15,22;DOID:2994,2.56e-15,22;DOID:169,1.30e-11,6;DOID:171,3.77e-07,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000013;9.19e-14;5!UBERON:0002410;9.19e-14;5!UBERON:0000010;7.33e-08;8!UBERON:0000922;4.50e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000013;9.19e-14;5!UBERON:0002410;9.19e-14;5!UBERON:0000010;7.33e-08;8!UBERON:0000922;4.50e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.90e-14,5;UBERON:0002410,7.90e-14,5;UBERON:0000010,6.75e-08,8 | |||
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| ||
|short_description=p1@ADAMTS20 | |short_description=p1@ADAMTS20 | ||
}} | }} |
Latest revision as of 08:39, 18 September 2015
Short description: | p1@ADAMTS20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTS20_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | -277bp_to_ENST00000389417, ENST00000389420, ENST00000553158, NM_025003, uc010skx.1_5end |
EntrezGene: | ADAMTS20 |
HGNC: | 17178 |
UniProt: | P59510G3V1X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.33e-36 | 5 |
neuron | 1.17e-11 | 6 |
neuroblast | 1.17e-11 | 6 |
electrically signaling cell | 1.17e-11 | 6 |
neurectodermal cell | 2.62e-10 | 59 |
ectodermal cell | 5.67e-10 | 72 |
germ line cell | 5.89e-10 | 7 |
germ cell | 5.89e-10 | 7 |
neuronal stem cell | 7.30e-09 | 8 |
migratory neural crest cell | 1.65e-07 | 41 |
melanocyte | 4.02e-07 | 10 |
melanoblast | 4.02e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.90e-14 | 5 |
autonomic nervous system | 7.90e-14 | 5 |
peripheral nervous system | 6.75e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.56e-15 | 22 |
germ cell cancer | 2.56e-15 | 22 |
neuroendocrine tumor | 1.30e-11 | 6 |
neuroectodermal tumor | 3.77e-07 | 10 |