FFCP PHASE1:Hg19::chr12:43946001..43946016,-: Difference between revisions
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|id=chr12:43946001..43946016,-
|short_description=p1@ADAMTS20
|description=CAGE_peak_1_at_ADAMTS20_5end
|association_with_transcript=-277bp_to_ENST00000389417,ENST0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80070 | |EntrezGene=80070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17178 | |HGNC=17178 | ||
|TSSclassifier=strong | |||
|UniProt=P59510,G3V1X8 | |UniProt=P59510,G3V1X8 | ||
|association_with_transcript=-277bp_to_ENST00000389417,ENST00000389420,ENST00000553158,NM_025003,uc010skx.1_5end | |||
|cluster_id=chr12:43946001..43946016,- | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_1_at_ADAMTS20_5end | |||
|id=chr12:43946001..43946016,- | |||
|ontology_enrichment_celltype=CL:0002322!7.74e-13!5;CL:0000039!9.43e-09!7;CL:0000586!9.43e-09!7;CL:0000064!2.27e-07!3;CL:0005012!2.27e-07!3;CL:0000067!2.27e-07!3;CL:0002304!2.27e-07!3;CL:0000133!5.98e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.98e-36;5!CL:0002321;6.89e-30;15!CL:0000333;9.19e-14;5!CL:0000540;1.40e-11;6!CL:0000404;1.40e-11;6!CL:0000039;6.16e-10;7!CL:0000586;6.16e-10;7!CL:0000148;3.93e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.33e-36,5;CL:0000540,1.17e-11,6;CL:0000031,1.17e-11,6;CL:0000404,1.17e-11,6;CL:0000133,2.62e-10,59;CL:0000221,5.67e-10,72;CL:0000039,5.89e-10,7;CL:0000586,5.89e-10,7;CL:0000047,7.30e-09,8;CL:0000333,1.65e-07,41;CL:0000148,4.02e-07,10;CL:0000541,4.02e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000031;1.40e-11;6!UBERON:0003918;1.47e-11;10!UBERON:0007687;1.47e-11;10!UBERON:0000358;2.29e-08;1 | |||
|ontology_enrichment_disease=DOID:3095!4.02e-13!22;DOID:2994!4.02e-13!22;DOID:169!7.29e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.68e-15;22!DOID:2994;2.68e-15;22!DOID:169;1.48e-11;6!DOID:171;4.06e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.56e-15,22;DOID:2994,2.56e-15,22;DOID:169,1.30e-11,6;DOID:171,3.77e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.09e-17!94;UBERON:0001016!1.09e-17!94;UBERON:0005743!9.98e-15!86;UBERON:0003075!1.92e-13!86;UBERON:0007284!1.92e-13!86;UBERON:0001049!1.09e-12!57;UBERON:0005068!1.09e-12!57;UBERON:0006241!1.09e-12!57;UBERON:0007135!1.09e-12!57;UBERON:0002346!1.64e-12!90;UBERON:0001017!3.38e-12!82;UBERON:0004121!9.34e-12!169;UBERON:0000924!3.03e-11!173;UBERON:0006601!3.03e-11!173;UBERON:0002616!9.36e-11!59;UBERON:0003056!2.24e-10!61;UBERON:0000955!2.32e-10!69;UBERON:0006238!2.32e-10!69;UBERON:0000033!2.50e-10!123;UBERON:0000153!3.21e-10!129;UBERON:0007811!3.21e-10!129;UBERON:0002020!1.50e-09!34;UBERON:0003528!1.50e-09!34;UBERON:0001950!1.55e-09!20;UBERON:0001893!2.05e-09!34;UBERON:0001869!8.22e-09!32;UBERON:0002619!1.65e-08!22;UBERON:0002791!1.85e-08!33;UBERON:0002780!1.86e-08!41;UBERON:0001890!1.86e-08!41;UBERON:0006240!1.86e-08!41;UBERON:0000013!2.86e-08!5;UBERON:0002410!2.86e-08!5;UBERON:0003080!3.54e-08!42;UBERON:0001778!2.27e-07!3;UBERON:0001775!2.27e-07!3;UBERON:0000956!2.87e-07!25;UBERON:0000203!2.87e-07!25;UBERON:0000988!3.67e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.19e-14;5!UBERON:0002410;9.19e-14;5!UBERON:0000010;7.33e-08;8!UBERON:0000922;4.50e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.90e-14,5;UBERON:0002410,7.90e-14,5;UBERON:0000010,6.75e-08,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.43917392846563,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17131635936948,3.04818467139416,6.27447291495399,3.21349270547648,4.28945446488568,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02367830757947,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,100.097904947389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,2.41320361269025,0.874813840149763,0.694499979733169,0,0,0,0,0,0,0,0,0,0,14.2949620720597,0,0.54323685961004,0,0,0,0,4.23846692266567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,2.25485129121739,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,3.85807556316046,6.32681408347275,4.56984371832104,0,0,0.0607495566580247,0,0,0.262272940674991,0,0,0,0,0,1.27134268827375,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.248385611765534,3.45871587340577,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7078526999199,1.72519698234691,0.314531883711793,7.53546503524896,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0.951576261675644,0.197318320688547,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,3.62803705259916,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,1.09265571963696,0.380095503034311,1.32585478664576,0.534434810531121,0,5.51556586443225,0,0,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | ||
|short_description=p1@ADAMTS20 | |||
}} | }} |
Latest revision as of 08:39, 18 September 2015
Short description: | p1@ADAMTS20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTS20_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | -277bp_to_ENST00000389417, ENST00000389420, ENST00000553158, NM_025003, uc010skx.1_5end |
EntrezGene: | ADAMTS20 |
HGNC: | 17178 |
UniProt: | P59510G3V1X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.33e-36 | 5 |
neuron | 1.17e-11 | 6 |
neuroblast | 1.17e-11 | 6 |
electrically signaling cell | 1.17e-11 | 6 |
neurectodermal cell | 2.62e-10 | 59 |
ectodermal cell | 5.67e-10 | 72 |
germ line cell | 5.89e-10 | 7 |
germ cell | 5.89e-10 | 7 |
neuronal stem cell | 7.30e-09 | 8 |
migratory neural crest cell | 1.65e-07 | 41 |
melanocyte | 4.02e-07 | 10 |
melanoblast | 4.02e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.90e-14 | 5 |
autonomic nervous system | 7.90e-14 | 5 |
peripheral nervous system | 6.75e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.56e-15 | 22 |
germ cell cancer | 2.56e-15 | 22 |
neuroendocrine tumor | 1.30e-11 | 6 |
neuroectodermal tumor | 3.77e-07 | 10 |