FFCP PHASE1:Hg19::chr3:45067642..45067645,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7123 | |EntrezGene=7123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11891 | |HGNC=11891 | ||
|TSSclassifier=strong | |||
|UniProt=P05452 | |UniProt=P05452 | ||
|association_with_transcript=-29bp_to_ENST00000296130_5end | |association_with_transcript=-29bp_to_ENST00000296130_5end | ||
|cluster_id=chr3:45067642..45067645,+ | |||
|coexpression_cluster_id=C193 | |coexpression_cluster_id=C193 | ||
|description=CAGE_peak_7_at_CLEC3B_5end | |description=CAGE_peak_7_at_CLEC3B_5end | ||
|id=chr3:45067642..45067645,+ | |id=chr3:45067642..45067645,+ | ||
|ontology_enrichment_celltype=CL:0000153!1.51e-07!9;CL:0000447!1.51e-07!9 | |ontology_enrichment_celltype=CL:0000153!1.51e-07!9;CL:0000447!1.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002598;2.53e-11;2!CL:0002602;2.53e-11;2!CL:0000153;1.97e-09;9!CL:0000447;1.97e-09;9!CL:0000135;2.48e-08;3!CL:0000388;2.48e-08;3!CL:0000214;3.80e-08;3!CL:0002541;6.20e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,1.42e-11,2;CL:0002598,3.46e-11,2;CL:0000153,2.68e-09,9;CL:0000447,2.68e-09,9;CL:0000135,2.58e-08,3;CL:0000388,2.58e-08,3;CL:0000214,3.55e-08,3;CL:0002541,8.48e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-18!115 | |ontology_enrichment_uberon=UBERON:0007023!2.03e-18!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0006444;2.53e-11;2!UBERON:0001995;2.53e-11;2!UBERON:0004715;2.53e-11;2!UBERON:0004905;9.37e-11;8!UBERON:0000982;9.37e-11;8!UBERON:0004770;9.37e-11;8!UBERON:0005631;8.39e-09;10!UBERON:0000158;8.39e-09;10!UBERON:0007846;2.48e-08;3!UBERON:0000043;2.48e-08;3!UBERON:0007845;2.48e-08;3!UBERON:0006915;3.80e-08;3!UBERON:0007616;3.80e-08;3!UBERON:0002217;3.80e-08;3!UBERON:0002018;3.80e-08;3!UBERON:0002106;4.86e-08;3!UBERON:0003124;6.20e-08;3!UBERON:0000920;6.20e-08;3!UBERON:0002418;7.90e-08;3!UBERON:0004755;7.90e-08;3!UBERON:0007195;9.39e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,1.42e-11,2;UBERON:0001995,1.42e-11,2;UBERON:0004715,1.42e-11,2;UBERON:0004905,6.74e-11,8;UBERON:0000982,6.74e-11,8;UBERON:0004770,6.74e-11,8;UBERON:0007846,2.58e-08,3;UBERON:0000043,2.58e-08,3;UBERON:0007845,2.58e-08,3;UBERON:0006915,3.55e-08,3;UBERON:0007616,3.55e-08,3;UBERON:0002217,3.55e-08,3;UBERON:0002018,3.55e-08,3;UBERON:0002106,5.41e-08,3;UBERON:0002418,5.41e-08,3;UBERON:0004755,5.41e-08,3;UBERON:0004854,5.41e-08,3;UBERON:0009034,5.41e-08,3;UBERON:0002095,5.41e-08,3;UBERON:0004782,5.41e-08,3;UBERON:0003281,5.41e-08,3;UBERON:0009664,5.41e-08,3;UBERON:0002296,5.41e-08,3;UBERON:0005602,5.41e-08,3;UBERON:0001179,5.41e-08,3;UBERON:0006293,5.41e-08,3;UBERON:0000920,8.48e-08,3;UBERON:0004457,2.77e-07,12;UBERON:0000042,2.77e-07,12;UBERON:0007195,9.67e-07,1 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0,0,1.89515962028049,0.783556884599516,0,0,0,0,1.98026164736075,2.98257638155124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,1.00267582127178,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0.163461903113459,0.908144565869588,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,1.2813443329114,0.423863802319124,0,0.618315175430633,0,0,0.168776332241266,0,0,2.20919756741518,0.80823028409406,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,46.4953379607447,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0,0,0.415941723061614,1.07057393278297,0.473107245101804,1.40569697991256,8.72743689210385,0,0,0,0,0.173767228936166,1.17480694477644,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.859361958946189,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58189712359363,0,1.02359116524534,2.99557291623744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0.354761064070598,2.32218398827431,6.58589785919804,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,9.31103490476991,0.296964680832639,7.98617825458003,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.789147245095469,0,3.33410970433911,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,6.06102203490647,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.13223260174269,0,0,0.213574825135389,0.628817220398664,1.24271716604159,0,0,0,0,1.63205341010842,2.0055191521816,1.22538230705385,0.327872630709804,0,0.886068179966986,0,0,1.14681839138014,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,9.7879234375619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,1.48863353516788,0,0,0,0.336283722218824,0,0,0.709618961301111,0,0,0.203909198930495,0,0,0,0.235479278551542,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0.971421986118279,0,0,0,0,0,0,0.231522474323834,0,0,0.980593287015622,0,0.196308467114945,0,0,0,2.06764619555678,2.19156819110162,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0,0.743990036333503,9.24351257262837,6.48939843185684,0,0,0,0,0,0,0,0.303114792872958,0.803892390468535,0,0,0.639701945702943,0.476128862927481,0,0.124149428591716,0,0,0.202117188958219,0,0.684466602170562,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,0.665756774185513,0.603821380773079,0 | |phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0,0,1.89515962028049,0.783556884599516,0,0,0,0,1.98026164736075,2.98257638155124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,1.00267582127178,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0.163461903113459,0.908144565869588,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,1.2813443329114,0.423863802319124,0,0.618315175430633,0,0,0.168776332241266,0,0,2.20919756741518,0.80823028409406,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,46.4953379607447,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0,0,0.415941723061614,1.07057393278297,0.473107245101804,1.40569697991256,8.72743689210385,0,0,0,0,0.173767228936166,1.17480694477644,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.859361958946189,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58189712359363,0,1.02359116524534,2.99557291623744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0.354761064070598,2.32218398827431,6.58589785919804,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,9.31103490476991,0.296964680832639,7.98617825458003,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.789147245095469,0,3.33410970433911,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,6.06102203490647,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.13223260174269,0,0,0.213574825135389,0.628817220398664,1.24271716604159,0,0,0,0,1.63205341010842,2.0055191521816,1.22538230705385,0.327872630709804,0,0.886068179966986,0,0,1.14681839138014,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,9.7879234375619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,1.48863353516788,0,0,0,0.336283722218824,0,0,0.709618961301111,0,0,0.203909198930495,0,0,0,0.235479278551542,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0.971421986118279,0,0,0,0,0,0,0.231522474323834,0,0,0.980593287015622,0,0.196308467114945,0,0,0,2.06764619555678,2.19156819110162,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0,0.743990036333503,9.24351257262837,6.48939843185684,0,0,0,0,0,0,0,0.303114792872958,0.803892390468535,0,0,0.639701945702943,0.476128862927481,0,0.124149428591716,0,0,0.202117188958219,0,0.684466602170562,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,0.665756774185513,0.603821380773079,0 | ||
|short_description=p7@CLEC3B | |short_description=p7@CLEC3B | ||
}} | }} |
Latest revision as of 08:29, 18 September 2015
Short description: | p7@CLEC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CLEC3B_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | -29bp_to_ENST00000296130_5end |
EntrezGene: | CLEC3B |
HGNC: | 11891 |
UniProt: | P05452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 1.42e-11 | 2 |
bronchial smooth muscle cell | 3.46e-11 | 2 |
GAG secreting cell | 2.68e-09 | 9 |
carbohydrate secreting cell | 2.68e-09 | 9 |
fibrocyte | 2.58e-08 | 3 |
tendon cell | 2.58e-08 | 3 |
synovial cell | 3.55e-08 | 3 |
chorionic membrane mesenchymal stem cell | 8.48e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 1.42e-11 | 2 |
fibrocartilage | 1.42e-11 | 2 |
annulus fibrosus disci intervertebralis | 1.42e-11 | 2 |
articulation | 6.74e-11 | 8 |
skeletal joint | 6.74e-11 | 8 |
articular system | 6.74e-11 | 8 |
dense regular connective tissue | 2.58e-08 | 3 |
tendon | 2.58e-08 | 3 |
regular connective tissue | 2.58e-08 | 3 |
stratified squamous epithelium | 3.55e-08 | 3 |
layer of synovial tissue | 3.55e-08 | 3 |
synovial joint | 3.55e-08 | 3 |
synovial membrane of synovial joint | 3.55e-08 | 3 |
spleen | 5.41e-08 | 3 |
cartilage tissue | 5.41e-08 | 3 |
skeletal tissue | 5.41e-08 | 3 |
gastrointestinal system mesentery | 5.41e-08 | 3 |
stomach region | 5.41e-08 | 3 |
mesentery | 5.41e-08 | 3 |
gastrointestinal system serosa | 5.41e-08 | 3 |
mesentery of stomach | 5.41e-08 | 3 |
gut mesentery | 5.41e-08 | 3 |
dorsal mesentery | 5.41e-08 | 3 |
dorsal mesogastrium | 5.41e-08 | 3 |
peritoneal cavity | 5.41e-08 | 3 |
spleen primordium | 5.41e-08 | 3 |
egg chorion | 8.48e-08 | 3 |
cavity lining | 2.77e-07 | 12 |
serous membrane | 2.77e-07 | 12 |
stroma of bone marrow | 9.67e-07 | 1 |