FFCP PHASE1:Hg19::chr13:99868111..99868115,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:99868111..99868115,- to FFCP PHASE1:Hg19::chr13:99868111..99868115,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=38013 | |HGNC=38013 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-99bp_to_ENST00000394213_5end | |||
|cluster_id=chr13:99868111..99868115,- | |||
|description=CAGE_peak_1_at_H2AFZP3_5end | |||
|id=chr13:99868111..99868115,- | |||
|ontology_enrichment_celltype=CL:0000012!5.28e-11!682;CL:0000548!5.40e-11!679;CL:0000004!5.40e-11!679;CL:0000255!5.40e-11!679;CL:0000003!3.40e-10!722 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.03e-33;6!CL:0000404;2.03e-33;6!CL:0002553;2.44e-09;1!CL:0002601;2.44e-09;1!CL:0002319;2.55e-07;25!CL:0002552;2.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.80e-34,6;CL:0000031,3.80e-34,6;CL:0000404,3.80e-34,6;CL:0000047,1.33e-25,8;CL:0002553,1.43e-09,1;CL:0002601,1.99e-09,1;CL:0002319,1.81e-07,25;CL:0000393,1.90e-07,61;CL:0000211,1.90e-07,61;CL:0002552,3.45e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;2.03e-33;6 | |||
|ontology_enrichment_disease=DOID:162!5.92e-12!235;DOID:14566!7.61e-11!239;DOID:2531!9.77e-10!51;DOID:0060083!9.77e-10!51;DOID:0050686!1.09e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.24e-07,51;DOID:0060083,8.24e-07,51;DOID:1240,9.31e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0.37129905888014,0,0,0.602694528023977,0,0,0.369363174230364,0,0.313454721478088,0.286235987131057,0.821246550437305,0.502170558379211,0.382067028739756,0.738905305049512,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0,0,0.697204805222715,0.710846162437108,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0,0.641858054152187,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0.949387162322653,0,0.637812899895131,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.384273959177026,0.780356085359269,0.328875809207352,0,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,1.64225599384209,0,0,0.144824403882799,0,0,0.639312809217652,0.361439152384566,0.50133791063589,0,0,0,0.661743720148475,0.886917589850256,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0.522389211897802,0.398873881556595,0,0.571994910780128,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0,0.625098097988558,0.22452937262617,0.563057402416611,1.53316637465883,0,0.549605231791222,0,0,0,0,0.633152558322899,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.323745888736263,0.280901613404497,0.204154171254893,1.22834317311768,0,1.18800285728205,0,0,0,0.841680569770331,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.680593098960126,0,0,0,0,0,0,0,0.506328996723799,0,0,0,0,0,0.10075209822764,0.169560592310488,0.57978255948989,0.545492241181669,0,0.365921118388786,0.530119073285941,0.116193942869518,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0.354920400119532,0.505754070234305,0.482022059766964,0.661763836394364,0.653638332277218,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,1.7658523976586,0,0.514703430895577,0,0,0.301586917234893,0.277765335475589,0,1.03993478527958,0,0.579652024875384,0.234817388471643,0,0.462985512576611,0.380508304469197,0,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0.352193736052904,0.207328115540772,0.288239906833923,0,0.63497894292169,0,0,0,1.43958489784653,0.901029173531752,0.285826432630578,0.224262168690721,0,0.5867062865676,0.258543431515556,0,0.845302752556,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0.358121926479791,0.784596007954691,0.197030760201927,0,0,0,0,1.54657762555539,0.670065061337395,2.55175500661265,0.749007023947182,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0.553107505625109,0.260650843404249,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0.160853921143607,0,0.462629081407967,0,0.246381468041427,0,0,0.362578348774867,0.40101294060657,0,0.459257792658427,0.728364672026868,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0.647747748306418,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0,0.732555718546747,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.689182862422653,0.322260734604821,0.145016693914229,0.767039646744908,0.0890320356467374,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0.143124886741991,1.116475108079,0,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0.899362287916574,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0.405820753925408,0,0.281695602532241,1.29070216983646,0.196498082026242,0,1.41904425628239,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0.735120647943095,0.929015875628594,0.865615277858669,0.426851060090485,0.478278818186467,0.199579371432817,0.383010740264733,0,0.649243880549111,0.280797178113459,0.456469358066384,1.09675927041116,0,0,0.802940375518498,0.403599414382095,0,0,1.22896305723383,0,0.500547425135725,0.19538809540204,0.278406173895242,1.23087398947712,1.35227839237992,0.33307196799782,0,0,0,0.485442086998054,0.334330152832435,0,0,0.593929361665277,0,0,0.140669416410513,0.222617410045812,0.659215496907038,0.211125408127993,0,0,0.251932747854276,0.20453736500431,0.492339221844278,0,0,0.179021174675609,1.02314474045374,0,0,0,0,0,0,0.520855522170466,0.524759999977174,0,0.341380344856499,0.508507300585533,0.236387681767936,0.344743373241465,0.291604613383254,0.694499979733169,0,0.1205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| ||
|short_description=p1@H2AFZP3 | |||
}} | }} |
Latest revision as of 08:19, 18 September 2015
Short description: | p1@H2AFZP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_H2AFZP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_ENST00000394213_5end |
EntrezGene: | NA |
HGNC: | 38013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.80e-34 | 6 |
neuroblast | 3.80e-34 | 6 |
electrically signaling cell | 3.80e-34 | 6 |
neuronal stem cell | 1.33e-25 | 8 |
lung fibroblast | 1.43e-09 | 1 |
uterine smooth muscle cell | 1.99e-09 | 1 |
neural cell | 1.81e-07 | 25 |
electrically responsive cell | 1.90e-07 | 61 |
electrically active cell | 1.90e-07 | 61 |
fibroblast of gingiva | 3.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.24e-07 | 51 |
immune system cancer | 8.24e-07 | 51 |
leukemia | 9.31e-07 | 39 |