FFCP PHASE1:Hg19::chr16:87866311..87866331,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11063 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-201bp_to_BC114608_5end | |||
|cluster_id=chr16:87866311..87866331,- | |||
|coexpression_cluster_id=C570 | |||
|description=CAGE_peak_4_at_SLC7A5_5end | |||
|id=chr16:87866311..87866331,- | |||
|ontology_enrichment_celltype=CL:0000066!1.50e-23!254;CL:0000063!7.72e-11!578;CL:0002076!3.79e-10!43;CL:0000223!1.53e-09!59;CL:0000548!3.83e-08!679;CL:0000004!3.83e-08!679;CL:0000255!3.83e-08!679;CL:0000012!5.15e-08!682;CL:0002077!1.50e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.79e-12;42!CL:0002251;4.91e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.09e-21,253;CL:0002076,7.79e-15,42;CL:0000223,4.78e-11,58;CL:0002251,6.12e-08,20;CL:0002077,5.02e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.34e-11!143;DOID:305!4.09e-11!106;DOID:162!4.89e-09!235;DOID:14566!3.36e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.38e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.48e-07!169;UBERON:0000925!2.48e-07!169;UBERON:0006595!2.48e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;4.23e-11;13!UBERON:0001737;3.63e-10;9!UBERON:0001557;3.63e-10;9!UBERON:0000486;3.54e-08;12!UBERON:0000344;8.32e-08;20!UBERON:0003343;1.33e-07;4!UBERON:0004785;1.33e-07;4!UBERON:0000065;5.20e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,7.43e-11,13;UBERON:0001737,2.55e-10,9;UBERON:0001004,5.63e-09,74;UBERON:0004119,8.66e-09,160;UBERON:0000925,8.66e-09,160;UBERON:0006595,8.66e-09,160;UBERON:0000344,1.24e-07,20;UBERON:0003343,3.15e-07,4;UBERON:0004785,3.15e-07,4 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0.446961094427288,0,0,0,0,0.737201809504527,2.09340350391728,0.873765488520689,0.263766978228454,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0.393364276848904,0.383829398097213,0,0.919421224478927,1.204823675113,2.21852406100073,0.232401601740905,0.142169232487422,0,0,0.802177789880567,0,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,1.23882548358041,0.863077176966451,1.2808035326455,0,0.689491361473237,0.645484683583826,2.70852973188684,0.188242339542605,0.272906150057846,0.449446968890169,5.81559395504715,0.641858054152187,2.55734850319616,0,0,0.426224750532694,3.19230162491442,1.13477044938228,1.24564449799115,0,1.0429658368404,0.434377689410233,1.81619850790011,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,1.33720097891754,0,0,0,0.12786256184353,0.361439152384566,0,1.01392563272577,0,0.486634870302636,0,0.886917589850256,0.087834785693126,0.130979075497713,3.27865759463288,4.44941331341315,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0,0,0,0.183201743930407,1.31780417436063,0,3.05265836499774,0,0.379891534993739,0,0.573673241497627,0.354668382198357,0,1.06748995729705,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.597794722207204,0.117434498643765,0,0,0,0,0.309977343527296,1.18800285728205,1.23633464639278,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.453728732640084,0.538168907066586,0,0,0.600182192168805,0.103052529238439,0,0.37223371266318,0,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0.403008392910561,0,2.31913023795956,1.36373060295417,1.14721838155602,0.243947412259191,0,0.232387885739037,0.10366105501537,0.252320850875628,0.72995471815166,0,3.85944562915731,0,0,0,1.30137480043828,1.18009283054671,1.44606617930089,1.32352767278873,2.61455332910887,0.474541238222193,1.21348177344148,1.17732879075208,1.53898862778556,0.738155454624648,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0,3.62175941848464,4.49607013030478,0.904760751704678,1.66659201285353,0.651616610620649,0,2.88662684050547,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0.93733833986777,0.503946384596579,0.567100388969546,1.79117045405697,1.74380363108377,1.53353071666084,0,0.264145302039678,0,0,0,0.571481048629521,2.29193055334967,1.17217447210047,5.13217338068116,1.64523988325318,0.901029173531752,1.14330573052231,0,0.43596006883328,0,0.517086863031111,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,0,0.414415513436035,0,0,0.271265023699736,0,2.3195768543631,0.315404830067869,0.35142424497814,0,2.27407504055985,1.03473071292505,0.664225598535437,0.368738337083406,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0.213455115606889,3.33440328590885,3.32870879020994,1.20956117331872,0.248107807818777,0.153461973288062,1.40330047216537,0.512556597022804,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0,0,0,0.966875596732978,7.81975234182811,17.2191449310126,0.918515585316854,0.546273504020151,0.917870904715969,0.451199612907412,0.385076685522074,0,1.46139224653261,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,1.09629938322967,1.0457418040996,1.02580050046556,0.328014645699706,0.325378394664303,0.206082023295445,0.0915694648183434,0.247528499761764,1.14853107599234,14.3013254128035,0,2.03008508413456,0.308097234229289,0,0.275673144969061,0.107420244868274,0,0,0.623224249527161,12.8922233981563,5.38132188622297,0.638063562472921,5.76599350876635,0.464845549297286,0.94443704049192,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0.855877976067841,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.545999645631943,1.1312434556297,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,2.32218398827431,0.658589785919804,0,0.349934720244983,1.34710957815717,0,3.26672954583968,0.282431402330337,2.58303223602738,3.36942951335251,2.21715076768338,0.689170200620878,0,0,0,0,0,0.648473311192717,0,0,0,0.962479855263359,0.490080431962063,1.30062222588003,0.144269212976445,0.284567373393656,0.956557636372934,0.199579371432817,0,0.423347165447766,0,0,0,0.783399478865116,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0.568272293612826,0.23874448473769,0.296964680832639,0,0,0.422008249231538,0.779160935160341,0.494411622680279,0,0,0,0,0.511343412510774,0.123084805461069,0.933118762985422,0.359473404589307,3.75944466818779,0,0.0986434056369336,0,0,1.93866549219044,0.278304294485554,1.99613798001194,1.04171104434093,0,0,2.04828206913899,0,1.41832609060762,1.03423011972439,0,0.694499979733169,0,0,0,0.331737779793674,0,0,1.74301541630384,2.23077990845765,0,0.683652335082007,0,2.51321404347362,0.869178975376065,0.31900115973192,0.274792780205587,0,2.04386596391473,0.156980256395025,0,0,0.19606253431774,0.335643173951685,0.569261198172555,0.317873157960757,3.79796516150449,0.816164040795739,0.565412285735763,0,0,0,0,0.593042257361244,0.494255755786011,0.417687798021821,0.067401132980677,0,0,0,0.782658475728359,1.21390189767046,0,0,0,0,0.751617097072463,0.103688191397247,0,0.330991955875499,0.627865836814451,0,0,3.74421617135474,3.12407529003236,0.783939179315021,1.30588809870604,0.17472666824203,1.37588825977293,0.580537987734511,0.950161122120412,0.656923656425674,0.290967049465258,0,0,0.685209623233754,0,0,0.782205530939212,0.240476460754601,0.213452994739353,1.39866726707491,0.432271251462318,0.343609788497747,0.514784993585894,2.88109595976299,0,1.88555227693436,0,0.104602846312333,0.407992870545287,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0,0.720599767084807,0,0.472699093843342,0.0824158583811665,0.0674035438541849,0.688992370603241,0,0.795229689809303,0,2.25054407851027,0.687697182986169,2.9080823662043,0.2249738915515,0,0.0607495566580247,1.34173875039706,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0.129282956361551,0,1.19760786519031,0,0,0,0,0,0.395223263795889,0.121792598380896,0.638341257770182,0,0,0,0,0.471162288750703,0,0.244052529803926,0.250381861413,0.573409195690071,0.332787154610557,0.0620964029413835,0.138348634936231,0.124980407962107,1.66814029295813,4.28198000317451,1.41159491818903,0,0,0.298509605773748,0.701139929541673,0,0.189403005275089,0,0.889811221596536,0.686520205190771,0.151230923763239,0,0.147855149989634,0,0.899606224327209,0,0,0.265841714557995,0,0,0,0,0,0.859284456339908,0,0,0.800055529326307,0,0.673498977531838,0,0,0,0.521988583930423,0.453411851024545,0.694567422971502,1.22368352253234,0.358177682162975,0.308801447160972,1.31570429747224,0.353378291891762,0.964570191354574,0,0.512483037175893,0.690860683462397,0,0,0,0.132864840313363,0,4.25892803500336,0.491545817507439,0.422624246717254,0.39997479170986,0.640150378164845,1.20550485762571,0,0,0.839277046316667,1.86623178009892,0.255788742607303,0,0.786329709279482,0,0.169732529954025,0,1.23935764259002,0.558644917973244,0.318004350653419,0.394308725006267,0,0.705351887381368,1.2249819094128,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,8.73514694659128,1.1796972334774,4.21885776599862,1.03973099535304,1.52552838186867,0,0,0.0752103283492573,0,0,0.523813388962845,1.47394725759087,0.591424344868181,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0.351742488719241,0.894336993477167,0,0,0,0,0,0.230467975111559,0,0.135939465953663,0.197318320688547,0.945550727071746,0.111231401892069,0.156986185701028,0,1.12108865325516,0,0.647782773655864,2.38875843943525,0.214429632529969,0,0.116241425368125,0,0,0.828864656652147,0.3414369541879,0,0,0,0.0852134047591577,0.423387050190929,0.4582137370881,0,0,2.12525320415805,0.490751168076215,0,0,0.205325613712494,0,0,0.233939463462106,0.198950775161368,0.118920090777569,1.1294608203896,0.219881033490858,0.150962843566674,0.0771741581079447,0,1.41095188908457,0,0.471353094203252,0.196308467114945,0,0.4226557275834,0.169927114687817,0.0939839179798536,0,0.199882311849858,4.99951028095841,0.705789743431384,0.641930933513346,0,0,0.573358332605805,0.157771562193185,0,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0.509944148709909,0,0.0918948995348449,0.250707539292375,0.909344378618873,0,0,0.103432995861895,0,0,0.0645889098360061,0,0.224263725161227,0,0,0.653150243690884,0.342233301085281,0,0,0,0.569822880276821,1.06727345877715,0,0.269475606319761,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p4@SLC7A5 | |||
}} |
Latest revision as of 08:18, 18 September 2015
Short description: | p4@SLC7A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC7A5_5end |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | -201bp_to_BC114608_5end |
EntrezGene: | SLC7A5 |
HGNC: | 11063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.09e-21 | 253 |
endo-epithelial cell | 7.79e-15 | 42 |
endodermal cell | 4.78e-11 | 58 |
epithelial cell of alimentary canal | 6.12e-08 | 20 |
ecto-epithelial cell | 5.02e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 7.43e-11 | 13 |
larynx | 2.55e-10 | 9 |
respiratory system | 5.63e-09 | 74 |
endoderm-derived structure | 8.66e-09 | 160 |
endoderm | 8.66e-09 | 160 |
presumptive endoderm | 8.66e-09 | 160 |
mucosa | 1.24e-07 | 20 |
mucosa of oral region | 3.15e-07 | 4 |
respiratory system mucosa | 3.15e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.38e-07 | 143 |