FFCP PHASE1:Hg19::chr4:69917078..69917101,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7364 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12554 | |||
|TSSclassifier=strong | |||
|UniProt=D6RH08 | |||
|association_with_transcript=0bp_to_ENST00000502942_5end | |||
|cluster_id=chr4:69917078..69917101,+ | |||
|description=CAGE_peak_5_at_UGT2B7_5end | |||
|id=chr4:69917078..69917101,+ | |||
|ontology_enrichment_celltype=CL:1000497!3.16e-12!18;CL:0002518!3.16e-12!18;CL:1000507!1.56e-09!12;CL:1000494!1.56e-09!12;CL:1000449!6.81e-09!16;CL:0002681!1.52e-08!13;CL:0002584!1.52e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.99e-16;10!CL:1000494;3.99e-16;10!CL:1001319;1.37e-11;1!CL:1000600;1.37e-11;1!CL:1000449;7.88e-11;15!CL:1000497;1.41e-09;17!CL:0002518;1.41e-09;17!CL:0000182;6.04e-08;12!CL:0002681;6.04e-08;12!CL:0002584;6.04e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.00e-16,10;CL:1000494,4.00e-16,10;CL:1001319,1.78e-11,1;CL:1000600,1.78e-11,1;CL:1000449,7.89e-11,15;CL:1000497,1.41e-09,17;CL:0002518,1.41e-09,17;CL:0000182,6.27e-08,12;CL:0002681,6.42e-08,12;CL:0002584,6.42e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.52e-14;11!UBERON:0009497;2.40e-12;13!UBERON:0006242;3.45e-11;1!UBERON:0003104;2.21e-07;31 | |||
|ontology_enrichment_disease=DOID:120!3.21e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.19e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.25e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0000489!2.25e-16!32;UBERON:0002113!2.40e-15!27;UBERON:0003918!2.40e-15!27;UBERON:0005095!2.40e-15!27;UBERON:0007687!2.40e-15!27;UBERON:0006554!9.00e-14!44;UBERON:0005172!2.07e-13!55;UBERON:0005173!2.07e-13!55;UBERON:0001008!2.33e-13!45;UBERON:0000080!3.32e-12!18;UBERON:0002120!3.32e-12!18;UBERON:0004875!3.32e-12!18;UBERON:0005721!3.32e-12!18;UBERON:0005754!3.32e-12!18;UBERON:0007297!3.32e-12!18;UBERON:0005177!8.39e-12!107;UBERON:0002417!1.48e-11!61;UBERON:0000916!1.48e-11!61;UBERON:0000058!2.47e-11!26;UBERON:0000466!3.29e-11!126;UBERON:0004876!9.35e-11!20;UBERON:0006555!1.28e-10!17;UBERON:0005103!1.28e-10!17;UBERON:0000083!1.28e-10!17;UBERON:0009201!1.28e-10!17;UBERON:0004819!1.28e-10!17;UBERON:0006553!1.28e-10!17;UBERON:0003074!1.28e-10!17;UBERON:0003060!1.28e-10!17;UBERON:0003887!3.90e-10!21;UBERON:0002553!7.40e-10!70;UBERON:0003064!7.67e-10!37;UBERON:0000464!8.60e-10!104;UBERON:0009773!1.56e-09!12;UBERON:0001231!1.56e-09!12;UBERON:0004810!1.56e-09!12;UBERON:0003886!4.58e-09!63;UBERON:0009569!5.69e-09!113;UBERON:0004211!6.81e-09!16;UBERON:0001285!6.81e-09!16;UBERON:0007684!6.81e-09!16;UBERON:0003220!6.81e-09!16;UBERON:0004208!6.81e-09!16;UBERON:0001851!9.09e-09!16;UBERON:0001225!1.52e-08!13;UBERON:0008987!1.52e-08!13;UBERON:0006947!1.54e-08!3;UBERON:0004054!1.54e-08!3;UBERON:0003103!2.87e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.99e-16;10!UBERON:0009773;3.99e-16;10!UBERON:0001231;3.99e-16;10!UBERON:0004810;3.99e-16;10!UBERON:0006947;2.42e-14;3!UBERON:0004054;2.42e-14;3!UBERON:0000489;4.47e-12;29!UBERON:0006554;1.17e-11;30!UBERON:0001008;1.17e-11;30!UBERON:0001301;1.37e-11;1!UBERON:0004645;1.37e-11;1!UBERON:0001256;1.37e-11;1!UBERON:0001259;1.37e-11;1!UBERON:0001000;3.45e-11;1!UBERON:0005352;3.45e-11;1!UBERON:0005904;5.44e-11;4!UBERON:0006555;7.88e-11;15!UBERON:0004819;7.88e-11;15!UBERON:0001285;7.88e-11;15!UBERON:0007684;7.88e-11;15!UBERON:0002113;2.41e-10;24!UBERON:0011143;2.41e-10;24!UBERON:0005172;5.71e-09;52!UBERON:0005173;5.71e-09;52!UBERON:0004175;5.84e-08;21!UBERON:0001225;6.04e-08;12!UBERON:0008987;6.04e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.05e-17,54;UBERON:0005173,6.05e-17,54;UBERON:0004810,4.00e-16,10;UBERON:0006555,1.67e-15,16;UBERON:0004819,1.67e-15,16;UBERON:0000489,3.35e-15,31;UBERON:0002417,4.12e-15,60;UBERON:0000916,4.12e-15,60;UBERON:0006947,2.42e-14,3;UBERON:0004054,2.42e-14,3;UBERON:0002113,1.63e-13,26;UBERON:0003918,1.63e-13,26;UBERON:0011143,1.63e-13,26;UBERON:0005095,1.63e-13,26;UBERON:0007687,1.63e-13,26;UBERON:0005177,2.45e-12,101;UBERON:0001301,1.45e-11,1;UBERON:0004645,1.78e-11,1;UBERON:0001256,1.78e-11,1;UBERON:0001259,1.78e-11,1;UBERON:0001000,3.28e-11,1;UBERON:0005352,3.28e-11,1;UBERON:0005904,5.44e-11,4;UBERON:0004211,7.89e-11,15;UBERON:0009773,7.89e-11,15;UBERON:0001231,7.89e-11,15;UBERON:0001285,7.89e-11,15;UBERON:0007684,7.89e-11,15;UBERON:0004208,7.89e-11,15;UBERON:0006554,8.57e-10,47;UBERON:0001008,1.42e-09,48;UBERON:0009569,4.38e-09,112;UBERON:0003103,1.71e-08,68;UBERON:0001225,6.42e-08,12;UBERON:0008987,6.42e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.492603536699674,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0.308482478109971,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,1.77135275340154,0,0,2.74434235121477,0,0,0,0,1.08378575017541,0.501689773854853,1.01950509218015,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,1.26598838716816,2.28525931422807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10296455230113,0.741742725430498,1.01105315781277,1.96854963029498,0,0,0,0,0,0,0,0,0,0,3.78267395036151,0.944182586429966,0,0,0,0,0,0,0,0,3.26587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0,0.521745061811734,0,0,0.406870733204662,0,1.28892668450986,0,0,0.400027764663154,0,0,0,0.770479321629213,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0.863710364874486,0.9555033757741,0.142953088353313,0,0,0,0,0.62164849248911,0,0,0.860454717640555,0.709992004383392,0.766920642832419,0.423387050190929,0,2.17144469965024,0.955538938977433,0.223710863595585,0,2.43835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.852935927603924,0,0.0645889098360061,0.31037357147929,0,0,0,0,0,0.471464371102113,1.64961072403156,0.332660356546013,2.11648498388534,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p5@UGT2B7 | |||
}} |
Latest revision as of 08:13, 18 September 2015
Short description: | p5@UGT2B7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UGT2B7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000502942_5end |
EntrezGene: | UGT2B7 |
HGNC: | 12554 |
UniProt: | D6RH08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.00e-16 | 10 |
nephron tubule epithelial cell | 4.00e-16 | 10 |
bladder cell | 1.78e-11 | 1 |
lower urinary tract cell | 1.78e-11 | 1 |
epithelial cell of nephron | 7.89e-11 | 15 |
kidney cell | 1.41e-09 | 17 |
kidney epithelial cell | 1.41e-09 | 17 |
hepatocyte | 6.27e-08 | 12 |
kidney cortical cell | 6.42e-08 | 12 |
renal cortical epithelial cell | 6.42e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 6.05e-17 | 54 |
abdominal segment element | 6.05e-17 | 54 |
nephron tubule epithelium | 4.00e-16 | 10 |
excretory tube | 1.67e-15 | 16 |
kidney epithelium | 1.67e-15 | 16 |
cavitated compound organ | 3.35e-15 | 31 |
abdominal segment of trunk | 4.12e-15 | 60 |
abdomen | 4.12e-15 | 60 |
male genital duct | 2.42e-14 | 3 |
internal male genitalia | 2.42e-14 | 3 |
kidney | 1.63e-13 | 26 |
kidney mesenchyme | 1.63e-13 | 26 |
upper urinary tract | 1.63e-13 | 26 |
kidney rudiment | 1.63e-13 | 26 |
kidney field | 1.63e-13 | 26 |
trunk region element | 2.45e-12 | 101 |
epididymis | 1.45e-11 | 1 |
urinary bladder urothelium | 1.78e-11 | 1 |
wall of urinary bladder | 1.78e-11 | 1 |
mucosa of urinary bladder | 1.78e-11 | 1 |
vas deferens | 3.28e-11 | 1 |
spermatic cord | 3.28e-11 | 1 |
duct of male reproductive system | 5.44e-11 | 4 |
nephron epithelium | 7.89e-11 | 15 |
renal tubule | 7.89e-11 | 15 |
nephron tubule | 7.89e-11 | 15 |
nephron | 7.89e-11 | 15 |
uriniferous tubule | 7.89e-11 | 15 |
nephrogenic mesenchyme | 7.89e-11 | 15 |
urinary system structure | 8.57e-10 | 47 |
renal system | 1.42e-09 | 48 |
subdivision of trunk | 4.38e-09 | 112 |
compound organ | 1.71e-08 | 68 |
cortex of kidney | 6.42e-08 | 12 |
renal parenchyma | 6.42e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.25e-21 | 2 |