FFCP PHASE1:Hg19::chr6:33754853..33754857,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221496 | |EntrezGene=221496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21244 | |HGNC=21244 | ||
|TSSclassifier=strong | |||
|UniProt=D6R958 | |UniProt=D6R958 | ||
|association_with_transcript=16bp_to_ENST00000513701_5end | |association_with_transcript=16bp_to_ENST00000513701_5end | ||
|cluster_id=chr6:33754853..33754857,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_9_at_LEMD2_5end | |description=CAGE_peak_9_at_LEMD2_5end | ||
|id=chr6:33754853..33754857,- | |id=chr6:33754853..33754857,- | ||
|ontology_enrichment_celltype=CL:0000039!1.05e-27!7;CL:0000586!1.05e-27!7;CL:0002127!5.38e-13!1;CL:0000914!5.38e-13!1;CL:0000911!5.38e-13!1;CL:0000814!5.38e-13!1;CL:0002042!5.38e-13!1;CL:0002039!5.38e-13!1;CL:0002040!5.38e-13!1;CL:0002041!5.38e-13!1;CL:0002322!1.95e-10!5;CL:0000893!3.93e-07!2;CL:0002489!3.93e-07!2;CL:0000809!3.93e-07!2;CL:0000808!3.93e-07!2;CL:0000894!3.93e-07!2;CL:0000806!3.93e-07!2;CL:0000807!3.93e-07!2;CL:0000805!3.93e-07!2;CL:0002425!3.93e-07!2 | |ontology_enrichment_celltype=CL:0000039!1.05e-27!7;CL:0000586!1.05e-27!7;CL:0002127!5.38e-13!1;CL:0000914!5.38e-13!1;CL:0000911!5.38e-13!1;CL:0000814!5.38e-13!1;CL:0002042!5.38e-13!1;CL:0002039!5.38e-13!1;CL:0002040!5.38e-13!1;CL:0002041!5.38e-13!1;CL:0002322!1.95e-10!5;CL:0000893!3.93e-07!2;CL:0002489!3.93e-07!2;CL:0000809!3.93e-07!2;CL:0000808!3.93e-07!2;CL:0000894!3.93e-07!2;CL:0000806!3.93e-07!2;CL:0000807!3.93e-07!2;CL:0000805!3.93e-07!2;CL:0002425!3.93e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.78e-29;7!CL:0000586;1.78e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.78e-29,7;CL:0000586,1.78e-29,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |||
|ontology_enrichment_disease=DOID:3095!1.63e-13!22;DOID:2994!1.63e-13!22 | |ontology_enrichment_disease=DOID:3095!1.63e-13!22;DOID:2994!1.63e-13!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.73e-24!8;UBERON:0003101!4.75e-19!22;UBERON:0000079!4.75e-19!22;UBERON:0003135!9.32e-18!11;UBERON:0000991!2.05e-09!21;UBERON:0009196!2.05e-09!21;UBERON:0009117!2.05e-09!21;UBERON:0005564!2.05e-09!21;UBERON:0004176!5.38e-09!22;UBERON:0005156!7.11e-07!59;UBERON:0000990!7.11e-07!59 | |ontology_enrichment_uberon=UBERON:0000473!2.73e-24!8;UBERON:0003101!4.75e-19!22;UBERON:0000079!4.75e-19!22;UBERON:0003135!9.32e-18!11;UBERON:0000991!2.05e-09!21;UBERON:0009196!2.05e-09!21;UBERON:0009117!2.05e-09!21;UBERON:0005564!2.05e-09!21;UBERON:0004176!5.38e-09!22;UBERON:0005156!7.11e-07!59;UBERON:0000990!7.11e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.22e-26;8!UBERON:0003135;2.25e-19;11!UBERON:0000991;6.74e-11;21!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.22e-26,8;UBERON:0003135,2.25e-19,11;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22 | |||
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|short_description=p9@LEMD2 | |short_description=p9@LEMD2 | ||
}} | }} |
Latest revision as of 08:13, 18 September 2015
Short description: | p9@LEMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LEMD2_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 16bp_to_ENST00000513701_5end |
EntrezGene: | LEMD2 |
HGNC: | 21244 |
UniProt: | D6R958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.78e-29 | 7 |
germ cell | 1.78e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.22e-26 | 8 |
male reproductive organ | 2.25e-19 | 11 |
gonad | 6.74e-11 | 21 |
indifferent external genitalia | 6.74e-11 | 21 |
indifferent gonad | 6.74e-11 | 21 |
gonad primordium | 6.74e-11 | 21 |
external genitalia | 1.80e-10 | 22 |
male organism | 1.80e-10 | 22 |
male reproductive system | 1.80e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |