FFCP PHASE1:Hg19::chr9:95736758..95736771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89846 | |EntrezGene=89846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16027 | |HGNC=16027 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSP0 | |UniProt=Q5JSP0 | ||
|association_with_transcript=0bp_to_ENST00000337352_5end | |association_with_transcript=0bp_to_ENST00000337352_5end | ||
|cluster_id=chr9:95736758..95736771,+ | |||
|coexpression_cluster_id=C296 | |||
|description=CAGE_peak_7_at_FGD3_5end | |description=CAGE_peak_7_at_FGD3_5end | ||
|id=chr9:95736758..95736771,+ | |id=chr9:95736758..95736771,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.26e-11!254;CL:0000223!5.01e-10!59;CL:0002076!2.61e-09!43 | |ontology_enrichment_celltype=CL:0000066!7.26e-11!254;CL:0000223!5.01e-10!59;CL:0002076!2.61e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.43e-10;4!CL:0002076;8.89e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.27e-10,4;CL:0000223,2.03e-09,58;CL:0000066,3.77e-08,253;CL:0002076,1.02e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.33e-19!106;DOID:0050687!4.36e-16!143;DOID:299!1.07e-14!25;DOID:1749!1.22e-11!14;DOID:162!2.93e-08!235;DOID:14566!6.22e-08!239;DOID:7!4.94e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:170;4.04e-07;6!DOID:1749;9.50e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.84e-11,106;DOID:0050687,8.85e-11,143;DOID:170,3.92e-07,6;DOID:1749,9.23e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.96e-13!12;UBERON:0004119!2.22e-08!169;UBERON:0000925!2.22e-08!169;UBERON:0006595!2.22e-08!169;UBERON:0003343!2.93e-08!4;UBERON:0004785!2.93e-08!4;UBERON:0000060!2.04e-07!12;UBERON:0005911!2.29e-07!82;UBERON:0003350!3.04e-07!5;UBERON:0001007!3.51e-07!155;UBERON:0001555!3.51e-07!155;UBERON:0007026!3.51e-07!155;UBERON:0000077!8.03e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.43e-10;4!UBERON:0001242;1.43e-10;4!UBERON:0001262;1.43e-10;4!UBERON:0004786;1.43e-10;4!UBERON:0004808;1.43e-10;4!UBERON:0001277;1.43e-10;4!UBERON:0004907;1.25e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.27e-10,4;UBERON:0001262,1.27e-10,4;UBERON:0004786,1.27e-10,4;UBERON:0004808,1.27e-10,4;UBERON:0001277,1.27e-10,4;UBERON:0001052,1.40e-10,4;UBERON:0005911,3.99e-10,82;UBERON:0004907,1.22e-08,5;UBERON:0003929,6.77e-08,54;UBERON:0001007,1.72e-07,145;UBERON:0001555,1.72e-07,145;UBERON:0007026,1.72e-07,145 | |||
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| ||
|short_description=p7@FGD3 | |short_description=p7@FGD3 | ||
}} | }} |
Latest revision as of 08:02, 18 September 2015
Short description: | p7@FGD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FGD3_5end |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | 0bp_to_ENST00000337352_5end |
EntrezGene: | FGD3 |
HGNC: | 16027 |
UniProt: | Q5JSP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.27e-10 | 4 |
endodermal cell | 2.03e-09 | 58 |
epithelial cell | 3.77e-08 | 253 |
endo-epithelial cell | 1.02e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.27e-10 | 4 |
wall of intestine | 1.27e-10 | 4 |
gastrointestinal system mucosa | 1.27e-10 | 4 |
gastrointestinal system epithelium | 1.27e-10 | 4 |
intestinal epithelium | 1.27e-10 | 4 |
rectum | 1.40e-10 | 4 |
endo-epithelium | 3.99e-10 | 82 |
lower digestive tract | 1.22e-08 | 5 |
gut epithelium | 6.77e-08 | 54 |
digestive system | 1.72e-07 | 145 |
digestive tract | 1.72e-07 | 145 |
primitive gut | 1.72e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.84e-11 | 106 |
cell type cancer | 8.85e-11 | 143 |
endocrine gland cancer | 3.92e-07 | 6 |
squamous cell carcinoma | 9.23e-07 | 14 |