FFCP PHASE1:Hg19::chr17:79633710..79633726,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27901 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-85bp_to_uc002kbb.2_5end | |||
|cluster_id=chr17:79633710..79633726,- | |||
|coexpression_cluster_id=C3019 | |||
|description=CAGE_peak_2_at_C17orf90_5end | |||
|id=chr17:79633710..79633726,- | |||
|ontology_enrichment_celltype=CL:0000084!2.13e-14!25;CL:0000827!2.13e-14!25;CL:0000791!2.06e-12!18;CL:0000789!2.06e-12!18;CL:0002420!2.06e-12!18;CL:0002419!2.06e-12!18;CL:0000790!2.06e-12!18;CL:0000542!1.00e-11!53;CL:0000051!1.00e-11!53;CL:0000838!1.08e-11!52;CL:0000625!2.34e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;9.86e-30;25!CL:0000791;1.21e-28;18!CL:0000789;1.21e-28;18!CL:0002419;1.21e-28;18!CL:0000625;6.72e-20;11!CL:0000624;2.25e-12;6!CL:0000542;5.39e-10;53!CL:0000898;3.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.54e-30,25;CL:0000827,3.54e-30,25;CL:0000791,3.34e-29,18;CL:0000789,3.34e-29,18;CL:0002420,3.34e-29,18;CL:0002419,3.34e-29,18;CL:0000790,3.34e-29,18;CL:0000625,2.00e-20,11;CL:0000838,1.95e-18,52;CL:0000542,6.13e-18,53;CL:0000051,6.13e-18,53;CL:0000624,1.95e-12,6;CL:0000898,3.24e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-28;18!CL:0000051;5.39e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;3.87e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.15e-07,15;UBERON:0000179,8.15e-07,15;UBERON:0000463,8.15e-07,15 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0.245733936501509,2.09340350391728,0.218441372130172,0.263766978228454,0.247532705920093,0.331397375727916,1.34465029290355,0,0,0.487932798790507,0.246242116153576,0.408001382488506,0.940364164434263,0,0.410623275218653,0,0.305653622991805,0.164201178899891,0.0787107813136792,0.393364276848904,1.91914699048606,0.309632246632152,0.919421224478927,1.204823675113,1.10926203050036,0.154934401160603,0.568676929949686,0.293600439334847,0.553995408531877,0.802177789880567,0.217010870715852,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0.850417199860174,0.419317291016752,0,0.150176892841506,0,0.285012743741249,0,0.547992461293902,3.51992488922645,0.546138611262131,0,0,1.60158394814405,0,0,0,0,0.587237189370939,0.764546456250458,0,0,1.05353633910031,2.55722701147983,3.93010762749165,3.90642848099067,2.67498392625085,2.93330039970231,4.2610302516126,5.84480185223734,4.56782873229212,5.00830042707223,5.09527957542329,2.16643091012012,4.86747014957566,4.1618991219161,4.1109476150919,2.21080014228679,4.34704628602579,5.93146252648242,6.68852070224283,9.40819714244791,4.41906436520508,7.2811893784365,12.3705880373747,3.79529538029254,6.05274287215784,8.46408490013344,1.90090408889675,2.71035214339991,3.07167866770604,4.99722906209383,5.20909954496837,5.74789597844733,1.41124720257313,1.60464117470104,1.30341963494519,0,0,0,0,0.50133791063589,0.579386075843295,0,0,0.189069634328136,0,0.175669571386252,0.392937226493138,0.728590576585084,1.11235332835329,1.29818957461873,0,0.398873881556595,1.43094374583205,2.28797964312051,0,0.198762407366705,0,0,1.13061588384802,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.450445921933289,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.397227542439656,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.468642863667593,1.5608003841516,0.570471821544449,0.298897361103602,0.587172493218824,0.485618833104395,0.140450806702248,0.61246251376468,0.245668634623536,0.516628905878827,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0,0.37223371266318,0,0.292311015483596,0.252433774244115,0.184099797284599,0.646584227275248,0,0.302256294682921,0,0.193260853163297,0,0.573609190778008,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,0,0.721879481669586,1.18306800039844,1.01150814046861,2.89213235860178,1.43382164552112,0.435758888184812,1.66089433377768,0.539325232640658,1.17732879075208,0.769494313892781,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,3.97316789473185,0.368965315629341,0.686271241194102,0.439001141634502,0,0.402115889646523,0.277765335475589,0.651616610620649,4.15973914111831,0,0,0,0,0,0.380508304469197,0,0.858486162094873,0,0,0.148631162288728,0.93733833986777,0.16798212819886,0.141775097242386,1.07470227243418,1.16253575405585,0.383382679165211,0,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0.763976851116555,0,1.71072446022705,0.102827492703324,0.600686115687835,0,0.224262168690721,0,0.07333828582095,0.129271715757778,7.15312891703765,1.690605505112,0.26593811658487,0,1.02882949704857,0,1.0656887160644,0,0.542621605391443,0,0.325736184293735,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0.358121926479791,0.672510863961164,2.36436912242313,2.37190332345469,1.15508732651774,0,0,0,0.837581326671744,0.637938751653163,0,0,0,0.12269149171914,0,0.542530047399471,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,2.0694614258501,0,0.184369168541703,0,0.391602314925481,0,0.82707210449155,1.07857100409308,1.70764092485511,1.5156378572313,0,0,0.744323423456331,0.153461973288062,0,0.256278298511402,0.511707249066704,0,1.48418066444991,0.308419387605311,0.177561725313127,0.328508624055237,0,0.464841513839837,0.120859449591622,0.40101294060657,0.920809889358963,0.229628896329213,0.728364672026868,0.131124414959424,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0.877039506583738,0.261435451024901,0,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0.495056999523528,0,0,0,0.290012154876366,0.770243085573222,0.767518373630648,0.275673144969061,0.429680979473094,0.145016693914229,0.511359764496605,0.178064071293475,0.330569830721956,0.192190067365106,0,0.708104465988849,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0.636406495851874,0,0.179872457583315,0,0.353437207037059,0.606547444719948,0,0.421258456238981,0,0.243713489631284,0,0,0.282810863907425,0,0,0.66343897524122,1.31535265576129,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0,0,1.41904425628239,0.422215270595328,0,0,0,0.384888450902048,0,0,0.282431402330337,0.43050537267123,0,0,0,0,1.52927441428475,2.84823593587081,0.714695326373367,2.05681136543097,2.59389324477087,0.540031437238115,3.96562588147135,0.427296284509893,0,0,0.371606350251437,0.28853842595289,0.213425530045242,1.75368900001705,0.199579371432817,1.1490322207942,0.211673582723883,1.62310970137278,0.842391534340376,1.14117339516596,0.783399478865116,0,0.338583555603207,0.481764225311099,0.80719882876419,0,0.343505344755765,0.921722292925374,0,0,3.12620952643264,1.11362469558097,0,0.270455678475983,0,0,0.37428108081644,0.146508179271894,0,0.557216921387392,0.284136146806413,0.71623345421307,0.296964680832639,0.307160702099232,0,0.281338832821026,0,1.15362711958732,0,0,1.38141957765574,0,0.102268682502155,0.369254416383208,0,0.359473404589307,0.716084698702437,0,0.295930216910801,0,1.11136990144637,0,0,0,0.260427761085233,0.174919999992391,0,0.796554137998498,0.254253650292766,0.472775363535873,0,0,0.347249989866585,0.885741385813839,0.120596438625408,0,0,0,0,1.0893846351899,0.278847488557207,0.384751292518985,0,0.922255617552241,0.359030577639089,0.108647371922008,0,0.0915975934018623,0.533034776018635,13.2851287654457,0.31396051279005,0,0.225595660617181,0.588187602953219,0.335643173951685,0.948768663620925,0,0,0.326465616318295,0,0.432777279484182,0,0.265372693510018,0,0.889563386041866,0.617819694732514,1.8795950910982,0.134802265961354,0,0.234264445725339,0.729819156862664,0.782658475728359,1.69946265673865,0,0,0,0,1.50323419414493,1.03688191397247,0,0,0,0,0.853828638089378,0.693373365065693,0.520679215005393,0.195984794828755,0.609414446062818,0.698906672968121,0.171986032471617,0.19351266257817,0.146178634172371,0.410577285266046,0.290967049465258,0,0.225980740780532,0.274083849293502,0.794858446811959,0.189932387867636,0.391102765469606,0.320635281006135,0,0.39961921916426,0.288180834308212,0.916292769327325,0.171594997861965,0.432164393964449,0.248505071130865,0.707082103850386,0.67952103036807,0.104602846312333,0.101998217636322,0,0,0.136905378891993,1.27746588066972,0,1.05154941711726,0,0.458320848023367,0,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0.236349546921671,0.247247575143499,0.0674035438541849,0.295282444544246,0.423366660328922,0,0,0.482259445395058,0.275078873194468,0.415440338029185,0.2249738915515,0,0,1.67717343799633,0.236417121897595,0.209818352539992,0.211200673038813,0,0.575745591958336,0,0,1.017074150619,1.08599920350743,0.864221491201268,0.326587360109409,0,0.164185041498678,0.511164065356265,0.113312091520126,0,0,0.258565912723101,0,0.342173675768659,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0.365377795142688,0.638341257770182,0.544017803369474,0,0.612691153526923,0,0.471162288750703,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0.124192805882767,0,0.74988244777264,0.758245587708239,0.570930667089935,0,0,0.579684114443301,0.298509605773748,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0.73927574994817,0.159296767163702,0,0.155262956876259,0,0,0,0.601030435988874,0.380805212168795,0.406870733204662,0,0.322231671127465,0,0,0,0.686791410365586,0.336749488765919,0,0,0,1.04397716786085,0.680117776536817,0.694567422971502,0.734210113519403,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0.337884881306145,0.76872455576384,1.0362910251936,0.607719912354764,0,0.389720617678777,0.265729680626726,0.163565394255844,0,0.245772908753719,0.633936370075881,0.79994958341972,0.426766918776564,0.516644938982447,1.13503190713367,0.736423801007363,0.979156554036111,0.622077260032973,0.511577485214607,0.862598491173454,0.943595651135378,0.327628914576042,1.3578602396322,1.06287460050841,0.743614585554013,1.11728983594649,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.207471757392654,0.322951291263702,0,0.294443155503077,0.589848616738702,0.733714394086716,0.346576998451015,0,0.690359926060101,0.198916222116275,0.0752103283492573,0.40341013740704,0,0,0.655087670040387,0.147856086217045,0.337687923091973,0.781078098613847,0,0.126831620387814,0,0,0,1.23109871051734,0.383287282918786,0,0,0,0,0.266107110487916,0.460935950223117,0.171488009437418,0.475788130837822,0.328863867814245,0.354581522651905,0.111231401892069,0.078493092850514,0.628462359664008,0.280272163313789,0,0.215927591218621,0.47775168788705,0.285906176706625,0.158013611732727,0.464965701472501,0.347716544605159,0,0,0,0,0.430227358820278,0.236664001461131,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0.671132590786754,0.490751168076215,0.609589624911347,0,0,0,0.485710993059139,0.701818390386317,0,0.356760272332706,0.22589216407792,0.109940516745429,0,0,0.437119121007915,0,0,0.235676547101626,0,0,0.4226557275834,0.169927114687817,0.281951753939561,0.257831551894309,0.499705779624645,0.71421575442263,1.05868461514708,0.160482733378337,0,0,0.143339583151451,0.788857810965923,0.271965960763659,0,0,0,0,0.432626562123789,0,0.437062287854782,0.253397002022874,0.917899467677836,0,0.275684698604535,0,0.909344378618873,1.07185652062471,0.829169439458779,0.103432995861895,0.213233981900981,0,2.38978966393223,1.11734485732544,0.33639558774184,0.0636471582781649,0.202117188958219,0.435433495793923,0,0.80822463617505,0.0717222053926763,0.665320713092027,0.0814032686109745,0.106727345877715,0,0.179650404213174,0,0.122241444182866,0,0.665756774185513,0.402547587182052,0.641136984606466 | |||
|short_description=p2@C17orf90 | |||
}} |
Latest revision as of 07:57, 18 September 2015
Short description: | p2@C17orf90 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C17orf90_5end |
Coexpression cluster: | C3019_chronic_CD4_CD8_Natural_Hodgkin_thymus_Whole |
Association with transcript: | -85bp_to_uc002kbb.2_5end |
EntrezGene: | C17orf90 |
HGNC: | 27901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.54e-30 | 25 |
pro-T cell | 3.54e-30 | 25 |
mature alpha-beta T cell | 3.34e-29 | 18 |
alpha-beta T cell | 3.34e-29 | 18 |
immature T cell | 3.34e-29 | 18 |
mature T cell | 3.34e-29 | 18 |
immature alpha-beta T cell | 3.34e-29 | 18 |
CD8-positive, alpha-beta T cell | 2.00e-20 | 11 |
lymphoid lineage restricted progenitor cell | 1.95e-18 | 52 |
lymphocyte | 6.13e-18 | 53 |
common lymphoid progenitor | 6.13e-18 | 53 |
CD4-positive, alpha-beta T cell | 1.95e-12 | 6 |
naive T cell | 3.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 8.15e-07 | 15 |
haemolymphatic fluid | 8.15e-07 | 15 |
organism substance | 8.15e-07 | 15 |