FFCP PHASE1:Hg19::chr1:163038669..163038763,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10000 | |||
|TSSclassifier=strong | |||
|UniProt=A7XA58,P49798 | |||
|association_with_transcript=0bp_to_ENST00000527393,NM_005613,uc009wuy.2_5end | |||
|cluster_id=chr1:163038669..163038763,+ | |||
|coexpression_cluster_id=C3897 | |||
|description=CAGE_peak_2_at_RGS4_5end | |||
|id=chr1:163038669..163038763,+ | |||
|ontology_enrichment_celltype=CL:0000359!5.31e-21!32;CL:0000192!5.50e-16!42;CL:0000514!5.50e-16!42;CL:0000680!4.04e-13!57;CL:0000056!4.04e-13!57;CL:0000355!4.04e-13!57;CL:0000183!7.86e-13!59;CL:0000187!9.13e-13!54;CL:0000055!1.02e-12!180;CL:0000393!6.97e-11!60;CL:0000211!6.97e-11!60;CL:0002539!3.10e-07!10;CL:0000057!3.83e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.98e-24;32!CL:0000192;1.38e-13;43!CL:0002539;1.01e-10;10!CL:1000306;6.22e-08;4!CL:0002547;6.22e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.72e-26,32;CL:0000192,1.91e-17,43;CL:0000514,1.91e-17,43;CL:0000680,2.35e-12,58;CL:0000056,2.35e-12,58;CL:0000355,2.35e-12,58;CL:0000187,3.33e-12,55;CL:0002539,1.02e-10,10;CL:0000393,2.17e-10,61;CL:0000211,2.17e-10,61;CL:1000306,4.90e-08,4;CL:0002547,4.90e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;1.38e-13;43 | |||
|ontology_enrichment_disease=DOID:2394!1.61e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.17e-14;14!DOID:193;2.77e-08;29!DOID:120;1.15e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.63e-14,14;DOID:193,2.40e-08,29;DOID:120,9.97e-08,27 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.17e-21!42;UBERON:0003509!1.17e-21!42;UBERON:0004572!1.17e-21!42;UBERON:0004573!1.27e-18!33;UBERON:0004571!1.27e-18!33;UBERON:0002616!2.21e-18!59;UBERON:0000025!6.93e-18!194;UBERON:0000955!9.66e-17!69;UBERON:0006238!9.66e-17!69;UBERON:0000073!1.93e-16!94;UBERON:0001016!1.93e-16!94;UBERON:0001049!3.01e-16!57;UBERON:0005068!3.01e-16!57;UBERON:0006241!3.01e-16!57;UBERON:0007135!3.01e-16!57;UBERON:0001981!5.55e-16!60;UBERON:0007500!5.55e-16!60;UBERON:0004537!5.55e-16!60;UBERON:0006965!5.55e-16!60;UBERON:0005743!6.49e-16!86;UBERON:0003075!1.52e-15!86;UBERON:0007284!1.52e-15!86;UBERON:0001017!2.23e-15!82;UBERON:0002049!5.99e-15!79;UBERON:0007798!5.99e-15!79;UBERON:0002780!3.61e-14!41;UBERON:0001890!3.61e-14!41;UBERON:0006240!3.61e-14!41;UBERON:0002346!4.65e-14!90;UBERON:0001869!5.12e-14!32;UBERON:0001893!1.16e-13!34;UBERON:0002619!1.32e-13!22;UBERON:0003080!1.43e-13!42;UBERON:0000055!1.52e-13!69;UBERON:0004872!1.59e-13!84;UBERON:0002020!1.66e-13!34;UBERON:0003528!1.66e-13!34;UBERON:0002791!8.11e-13!33;UBERON:0000119!1.04e-12!312;UBERON:0004111!1.20e-12!241;UBERON:0001950!2.55e-12!20;UBERON:0000483!3.32e-12!309;UBERON:0001134!2.08e-11!61;UBERON:0002036!2.08e-11!61;UBERON:0003082!2.08e-11!61;UBERON:0002385!2.17e-11!63;UBERON:0001015!2.17e-11!63;UBERON:0000383!2.17e-11!63;UBERON:0003056!3.46e-11!61;UBERON:0000033!3.47e-11!123;UBERON:0000956!3.84e-11!25;UBERON:0000203!3.84e-11!25;UBERON:0004535!6.76e-11!110;UBERON:0000477!8.31e-11!286;UBERON:0000475!9.57e-11!365;UBERON:0000947!1.04e-10!21;UBERON:0010191!1.04e-10!21;UBERON:0000153!2.77e-10!129;UBERON:0007811!2.77e-10!129;UBERON:0001009!3.77e-10!113;UBERON:0004290!1.21e-09!70;UBERON:0000914!1.46e-09!83;UBERON:0002329!1.46e-09!83;UBERON:0003077!1.46e-09!83;UBERON:0003059!1.46e-09!83;UBERON:0007282!1.46e-09!83;UBERON:0009618!1.46e-09!83;UBERON:0007285!1.46e-09!83;UBERON:0007023!4.13e-09!115;UBERON:0004121!2.72e-08!169;UBERON:0000481!7.35e-08!347;UBERON:0003914!1.06e-07!118;UBERON:0000924!1.15e-07!173;UBERON:0006601!1.15e-07!173;UBERON:0004237!3.10e-07!10;UBERON:0004695!3.10e-07!10;UBERON:0002111!3.10e-07!10;UBERON:0004178!3.10e-07!10;UBERON:0000200!3.80e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.19e-24;22!UBERON:0001950;1.43e-24;20!UBERON:0001869;1.34e-21;32!UBERON:0004573;1.62e-21;33!UBERON:0004571;1.62e-21;33!UBERON:0000956;3.72e-21;25!UBERON:0000203;3.72e-21;25!UBERON:0001893;5.64e-20;34!UBERON:0001637;3.00e-19;42!UBERON:0003509;3.00e-19;42!UBERON:0004572;3.00e-19;42!UBERON:0002791;3.87e-19;32!UBERON:0003528;1.43e-17;34!UBERON:0002020;1.43e-17;34!UBERON:0002780;3.71e-16;41!UBERON:0001890;3.71e-16;41!UBERON:0000200;1.85e-12;6!UBERON:0000073;8.78e-11;53!UBERON:0002616;8.78e-11;53!UBERON:0004237;1.01e-10;10!UBERON:0004695;1.01e-10;10!UBERON:0002111;1.01e-10;10!UBERON:0004178;1.01e-10;10!UBERON:0000947;3.59e-10;21!UBERON:0010191;3.59e-10;21!UBERON:0007500;1.93e-09;56!UBERON:0001981;1.93e-09;56!UBERON:0004537;1.93e-09;56!UBERON:0000955;3.01e-09;68!UBERON:0001017;1.02e-08;75!UBERON:0004797;6.22e-08;4!UBERON:0000415;6.22e-08;4!UBERON:0007240;6.22e-08;4!UBERON:0005742;6.22e-08;4!UBERON:0005734;6.22e-08;4!UBERON:0004664;6.22e-08;4!UBERON:0004663;6.22e-08;4!UBERON:0001871;2.57e-07;6!UBERON:0001870;3.89e-07;3!UBERON:0001872;5.82e-07;5!UBERON:0000349;9.67e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.75e-28,42;UBERON:0003509,2.75e-28,42;UBERON:0004572,2.75e-28,42;UBERON:0002619,1.26e-24,22;UBERON:0001950,1.56e-24,20;UBERON:0004573,1.68e-24,33;UBERON:0004571,1.68e-24,33;UBERON:0001869,4.97e-24,32;UBERON:0002780,7.58e-23,41;UBERON:0001890,7.58e-23,41;UBERON:0003080,7.58e-23,41;UBERON:0006240,7.58e-23,41;UBERON:0001893,2.93e-22,34;UBERON:0002791,1.67e-21,32;UBERON:0000956,3.90e-21,25;UBERON:0000203,3.90e-21,25;UBERON:0003528,6.66e-20,34;UBERON:0002020,6.66e-20,34;UBERON:0000073,5.07e-19,53;UBERON:0002616,5.07e-19,53;UBERON:0000025,1.16e-18,192;UBERON:0000955,6.07e-18,68;UBERON:0006238,6.07e-18,68;UBERON:0007500,1.12e-17,59;UBERON:0001981,1.12e-17,59;UBERON:0004537,1.12e-17,59;UBERON:0006965,1.12e-17,59;UBERON:0001049,1.36e-17,56;UBERON:0005068,1.36e-17,56;UBERON:0006241,1.36e-17,56;UBERON:0007135,1.36e-17,56;UBERON:0001017,5.50e-15,81;UBERON:0004872,1.80e-14,83;UBERON:0000055,2.88e-14,68;UBERON:0003056,3.08e-14,61;UBERON:0001016,1.03e-13,89;UBERON:0002049,2.03e-13,78;UBERON:0007798,2.03e-13,78;UBERON:0003075,1.39e-12,82;UBERON:0007284,1.39e-12,82;UBERON:0000200,1.86e-12,6;UBERON:0004111,2.04e-12,240;UBERON:0002346,1.26e-11,86;UBERON:0001134,3.89e-11,62;UBERON:0002036,3.89e-11,62;UBERON:0003082,3.89e-11,62;UBERON:0004237,1.02e-10,10;UBERON:0004695,1.02e-10,10;UBERON:0002111,1.02e-10,10;UBERON:0004178,1.02e-10,10;UBERON:0002385,1.38e-10,64;UBERON:0001015,1.38e-10,64;UBERON:0000383,1.38e-10,64;UBERON:0004535,1.82e-10,109;UBERON:0010314,2.77e-10,132;UBERON:0000947,3.20e-10,21;UBERON:0010191,3.20e-10,21;UBERON:0001009,5.96e-10,112;UBERON:0003077,1.03e-09,72;UBERON:0007285,1.03e-09,72;UBERON:0003498,1.14e-09,5;UBERON:0005985,1.14e-09,5;UBERON:0007524,1.73e-09,73;UBERON:0002329,6.33e-09,71;UBERON:0003059,6.33e-09,71;UBERON:0007282,6.33e-09,71;UBERON:0004290,6.33e-09,71;UBERON:0009618,6.33e-09,71;UBERON:0010371,2.74e-08,104;UBERON:0000415,4.90e-08,4;UBERON:0007240,4.90e-08,4;UBERON:0005742,4.90e-08,4;UBERON:0005734,4.90e-08,4;UBERON:0004664,4.90e-08,4;UBERON:0004663,4.90e-08,4;UBERON:0000119,7.45e-08,309;UBERON:0003914,7.91e-08,117;UBERON:0000483,1.23e-07,306;UBERON:0007503,1.38e-07,78;UBERON:0001871,2.58e-07,6;UBERON:0007023,2.85e-07,114;UBERON:0001870,3.98e-07,3;UBERON:0001872,5.75e-07,5;UBERON:0000486,8.82e-07,83 | |||
|phase1_expression=1.63510541343501,0,1.55049844505568,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,2.01697543935533,3.01347264011988,4.38186054232424,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.087834785693126,2.88153966094968,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,7.97772223486853,13.1085089005087,2.0078563452417,1.77334191099179,0,0,0,0,0.404132016209064,1.14423332179421,1.21085942115945,1.15235184896,0,0,0.570471821544449,0.298897361103602,0,0,0,1.02077085627447,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,3.51639767796065,0,0,0.423863802319124,0.900273288253207,0.206105058476878,0,0.558350568994769,0.337552664482532,0.194874010322397,0,0.184099797284599,0.323292113637624,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0.579652024875384,0.352226082707465,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00917975910825,0,0.95339771567235,2.32689088364,0,0,1.59562869950922,0,0,0,0,0.142977993658148,0,0,0,0,0,16.2777263612176,40.9620725542138,29.1921134251607,0,0,0,9.34536936417172,0,0,1.30303176000821,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.45579603071565,0.535286966391485,0,1.28855556491985,0.601892199455438,0,1.03473071292505,0.664225598535437,1.10621501125022,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.992431231275107,0.306923946576125,0,0.768834895534206,2.04682899626681,1.12597744800525,1.48418066444991,0.154209693802656,0.355123450626254,0.492762936082855,1.03850885836724,0.116210378459959,0.241718899183244,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,2.32422774648643,1.5740617341532,1.3940745403212,11.7052760466914,10.6461206063404,0.869932992075073,7.4129687641568,7.44249411058354,0.744316738719335,0.316379424718726,0.190630193923825,0,0,1.59101623962968,7.8494864019923,0.179872457583315,0,0.117812402345686,6.67202189191943,14.2659289055707,2.10629228119491,0,15.8413768260335,0,0,0,2.26016233240486,2.2054613741845,4.64407282668854,6.57676327880644,0,0,17.6532027957552,3.40805847909725,0.281695602532241,0.430234056612155,0.491245205065606,18.9035657285063,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0.71623345421307,0.296964680832639,0.921482106297696,28.8302817852226,4.22008249231538,0.222617410045812,0,1.68900326502395,0.597743964753209,0.276283915531148,24.6894092897191,0,0,0,0,0,0,0.0986434056369336,0,0,8.72399471485697,12.4309251536881,0,0,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,1.68835014075571,0,0.221158519862449,0.295547618953547,13.6018946235463,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.641183153813036,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,2.34264445725339,0,0,12.1390189767046,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,20.8292518694841,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0.136905378891993,0,5.15718529703949,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.0984274815147488,0,0.795229689809303,2.31545790389679,0,0.137539436597234,0,0,0,16.5846289676407,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,4.3439968140297,7.77799342081141,1.63293680054705,0,0,0,0,0,0,0.904980694530854,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,10.6328181596038,10.7383113113728,8.01221956521599,0.573409195690071,0.554645257684261,1.1177352529449,0,0,0,0,0,0,0,0.149254802886874,0,1.10961172300523,1.7046270474758,0.50313580350515,0.889811221596536,5.03448150473232,13.4595522149283,0.310874401165561,1.62640664988597,4.46030948058367,0.899606224327209,1.39736661188633,9.12353657249882,13.0262440133417,1.5652351854352,4.95850109690821,21.3250918814525,11.7992512629352,0.909243296012797,2.04080058380728,1.85613503951397,6.76763010787647,0,1.03018711554838,0.673498977531838,0,0,0,0,0,0.694567422971502,0,0.179088841081487,0,0,0.706756583783524,0,0,0.256241518587947,0,0,5.3920790099175,0,0,0,0,0,0,0,0,0,1.13503190713367,0.184105950251841,0,0,0,5.82253981542082,0.314531883711793,0,0,0,0,0,0.318004350653419,0,0.80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| |||
|short_description=p2@RGS4 | |||
}} |
Latest revision as of 07:52, 18 September 2015
Short description: | p2@RGS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGS4_5end |
Coexpression cluster: | C3897_Mesothelial_Multipotent_mesenchymal_Fibroblast_argyrophil_medial_leiomyoma |
Association with transcript: | 0bp_to_ENST00000527393, NM_005613, uc009wuy.2_5end |
EntrezGene: | RGS4 |
HGNC: | 10000 |
UniProt: | A7XA58P49798 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.72e-26 | 32 |
smooth muscle cell | 1.91e-17 | 43 |
smooth muscle myoblast | 1.91e-17 | 43 |
muscle precursor cell | 2.35e-12 | 58 |
myoblast | 2.35e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.35e-12 | 58 |
muscle cell | 3.33e-12 | 55 |
aortic smooth muscle cell | 1.02e-10 | 10 |
electrically responsive cell | 2.17e-10 | 61 |
electrically active cell | 2.17e-10 | 61 |
fibroblast of tunica adventitia of artery | 4.90e-08 | 4 |
fibroblast of the aortic adventitia | 4.90e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.63e-14 | 14 |
reproductive organ cancer | 2.40e-08 | 29 |
female reproductive organ cancer | 9.97e-08 | 27 |