FFCP PHASE1:Hg19::chr1:45966050..45966062,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:45966050..45966062,+
|short_description=p3@MMACHC
|description=CAGE_peak_3_at_MMACHC_5end
|association_with_transcript=194bp_to_uc001cny.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25974 | |EntrezGene=25974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24525 | |HGNC=24525 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=194bp_to_uc001cny.2_5end | |||
|cluster_id=chr1:45966050..45966062,+ | |||
|description=CAGE_peak_3_at_MMACHC_5end | |||
|id=chr1:45966050..45966062,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.10e-13!254;CL:0000223!1.75e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.83e-10;7!CL:0000586;9.83e-10;7!CL:0000167;1.17e-08;1!CL:0000164;1.17e-08;1!CL:0000502;1.17e-08;1!CL:0000172;1.17e-08;1!CL:0000173;1.17e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.36e-09,7;CL:0000586,1.36e-09,7;CL:0000167,1.22e-08,1;CL:0000164,1.22e-08,1;CL:0000502,1.22e-08,1;CL:0000172,1.22e-08,1;CL:0000173,1.22e-08,1;CL:0002351,1.22e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.17e-08;1!UBERON:0010227;3.56e-08;1!UBERON:0003104;8.79e-08;31!UBERON:0009117;7.71e-07;10!UBERON:0005564;7.71e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.20e-15!143;DOID:305!5.26e-15!106;DOID:162!3.68e-14!235;DOID:14566!5.66e-14!239;DOID:3095!2.29e-09!22;DOID:2994!2.29e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.17e-08;1!DOID:1799;3.56e-08;1!DOID:10165;3.56e-08;1!DOID:3111;3.56e-08;1!DOID:1798;3.56e-08;1!DOID:3603;3.56e-08;1!DOID:3095;6.85e-08;22!DOID:2994;6.85e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.22e-08,1;DOID:1799,3.57e-08,1;DOID:10165,3.57e-08,1;DOID:1798,3.57e-08,1;DOID:3111,6.24e-08,1;DOID:3603,6.24e-08,1;DOID:3095,7.91e-08,22;DOID:2994,7.91e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.51e-07!169;UBERON:0000925!3.51e-07!169;UBERON:0006595!3.51e-07!169;UBERON:0001041!8.16e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.51e-08;4!UBERON:0002079;3.56e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.89e-08,1;UBERON:0001052,3.70e-08,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.655324116390517,0.791300934685361,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0,0,0.229240217243854,0.246301768349837,0,0,0,0,0,0.30120591877825,0.369754010166788,1.93668001450754,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.196468613246569,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0.570471821544449,0,0.117434498643765,0,0,0.204154171254893,0,0.413303124703062,0,0,0.910161361938026,0,0.505008341862199,0,0.277064115484183,0,0,0,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0,0.731842236777572,1.19276791489337,0.813357600086629,0.621966330092223,0.756962552626885,0.72995471815166,0,0,0,0,0,0.118306800039844,0.674338760312407,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.491953754172454,0.343135620597051,0.439001141634502,0,0.100528972411631,0,0.325808305310325,0,1.44331342025273,0.34779121492523,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,0.112131084345361,0,0.1466765716419,0,3.57656445851882,0,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0,0,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0.846016147141356,0,0.736647911487171,0.114814448164607,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0.290012154876366,0,0.307007349452259,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0.576570202095319,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,1.08890984861323,0,0.43050537267123,1.68471475667626,0,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0.245040215981032,0.743212700502875,0,0.213425530045242,0,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0.935702702041099,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0.762760950878299,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0.219385397153973,1.30726156222788,0,0,0,0.23056390438806,2.06442582142476,0.434589487688032,0,0.0915975934018623,0,0,0,0.332423363800313,0.225595660617181,0.784250137270958,0,0.189753732724185,0.158936578980379,0,1.14262965711403,0.282706142867882,3.02944095638928,0,0,0,0,0,0,0,0.802577647298789,0,0.182454789215666,0.782658475728359,0.728341138602278,0.394584402849391,0,0,0.063186579628488,1.05226393590145,0.207376382794494,0,0,0,1.19472429772959,0,0.277349346026277,0.173559738335131,0.293977192243133,0.0870592065804026,0,0,0,0.219267951258557,0.410577285266046,0,0,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0,0,0.39961921916426,0.864542502924636,0.458146384663663,0.343189995723929,0.14405479798815,0,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0.268733889946905,0,3.49487848582361,0.393915911536118,0.329663433524666,0.26961417541674,0.0984274815147488,0.338693328263138,0,0,0.803765742325096,0.687697182986169,1.66176135211674,0,0.77380195455795,0,0.335434687599266,0.0788057072991982,0.157363764404994,0.528001682597033,0.179287339332845,0.767660789277781,1.42939065274673,0,0.5085370753095,0,0,0,0,0.328370082997356,0.170388021785422,0,0.58620893471233,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0.1217925983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| |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.655324116390517,0.791300934685361,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0,0,0.229240217243854,0.246301768349837,0,0,0,0,0,0.30120591877825,0.369754010166788,1.93668001450754,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.196468613246569,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0.570471821544449,0,0.117434498643765,0,0,0.204154171254893,0,0.413303124703062,0,0,0.910161361938026,0,0.505008341862199,0,0.277064115484183,0,0,0,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0,0.731842236777572,1.19276791489337,0.813357600086629,0.621966330092223,0.756962552626885,0.72995471815166,0,0,0,0,0,0.118306800039844,0.674338760312407,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.491953754172454,0.343135620597051,0.439001141634502,0,0.100528972411631,0,0.325808305310325,0,1.44331342025273,0.34779121492523,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,0.112131084345361,0,0.1466765716419,0,3.57656445851882,0,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0,0,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0.846016147141356,0,0.736647911487171,0.114814448164607,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0.290012154876366,0,0.307007349452259,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0.576570202095319,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,1.08890984861323,0,0.43050537267123,1.68471475667626,0,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0.245040215981032,0.743212700502875,0,0.213425530045242,0,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0.935702702041099,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0.762760950878299,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0.219385397153973,1.30726156222788,0,0,0,0.23056390438806,2.06442582142476,0.434589487688032,0,0.0915975934018623,0,0,0,0.332423363800313,0.225595660617181,0.784250137270958,0,0.189753732724185,0.158936578980379,0,1.14262965711403,0.282706142867882,3.02944095638928,0,0,0,0,0,0,0,0.802577647298789,0,0.182454789215666,0.782658475728359,0.728341138602278,0.394584402849391,0,0,0.063186579628488,1.05226393590145,0.207376382794494,0,0,0,1.19472429772959,0,0.277349346026277,0.173559738335131,0.293977192243133,0.0870592065804026,0,0,0,0.219267951258557,0.410577285266046,0,0,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0,0,0.39961921916426,0.864542502924636,0.458146384663663,0.343189995723929,0.14405479798815,0,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0.268733889946905,0,3.49487848582361,0.393915911536118,0.329663433524666,0.26961417541674,0.0984274815147488,0.338693328263138,0,0,0.803765742325096,0.687697182986169,1.66176135211674,0,0.77380195455795,0,0.335434687599266,0.0788057072991982,0.157363764404994,0.528001682597033,0.179287339332845,0.767660789277781,1.42939065274673,0,0.5085370753095,0,0,0,0,0.328370082997356,0.170388021785422,0,0.58620893471233,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0.1217925983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| ||
|short_description=p3@MMACHC | |||
}} | }} |
Latest revision as of 07:45, 18 September 2015
Short description: | p3@MMACHC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MMACHC_5end |
Coexpression cluster: | NA |
Association with transcript: | 194bp_to_uc001cny.2_5end |
EntrezGene: | MMACHC |
HGNC: | 24525 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.36e-09 | 7 |
germ cell | 1.36e-09 | 7 |
peptide hormone secreting cell | 1.22e-08 | 1 |
enteroendocrine cell | 1.22e-08 | 1 |
type D enteroendocrine cell | 1.22e-08 | 1 |
somatostatin secreting cell | 1.22e-08 | 1 |
pancreatic D cell | 1.22e-08 | 1 |
progenitor cell of endocrine pancreas | 1.22e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.89e-08 | 1 |
rectum | 3.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.22e-08 | 1 |
islet cell tumor | 3.57e-08 | 1 |
endocrine pancreas cancer | 3.57e-08 | 1 |
pancreatic endocrine carcinoma | 3.57e-08 | 1 |
cystadenocarcinoma | 6.24e-08 | 1 |
mucinous cystadenocarcinoma | 6.24e-08 | 1 |
germ cell and embryonal cancer | 7.91e-08 | 22 |
germ cell cancer | 7.91e-08 | 22 |