FFCP PHASE1:Hg19::chr10:46970474..46970503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83849 | |EntrezGene=83849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17167 | |HGNC=17167 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503753_5end | |association_with_transcript=0bp_to_ENST00000503753_5end | ||
|cluster_id=chr10:46970474..46970503,- | |||
|coexpression_cluster_id=C1582 | |coexpression_cluster_id=C1582 | ||
|description=CAGE_peak_1_at_SYT15_5end | |description=CAGE_peak_1_at_SYT15_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.13e-07;12!CL:0002580;8.92e-07;3!CL:0002579;9.67e-07;3 | |ontology_enrichment_celltype_v019=CL:0002334;3.13e-07;12!CL:0002580;8.92e-07;3!CL:0002579;9.67e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.81e-09,76;CL:0002334,3.16e-07,12;CL:0002580,9.04e-07,3;CL:0002579,9.71e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-22!115;UBERON:0003075!1.30e-13!86;UBERON:0007284!1.30e-13!86;UBERON:0002616!9.38e-13!59;UBERON:0002346!3.36e-12!90;UBERON:0001049!1.64e-11!57;UBERON:0005068!1.64e-11!57;UBERON:0006241!1.64e-11!57;UBERON:0007135!1.64e-11!57;UBERON:0000475!7.55e-11!365;UBERON:0005743!2.31e-10!86;UBERON:0000955!4.36e-10!69;UBERON:0006238!4.36e-10!69;UBERON:0001017!4.82e-10!82;UBERON:0000153!7.83e-10!129;UBERON:0007811!7.83e-10!129;UBERON:0000073!9.81e-10!94;UBERON:0001016!9.81e-10!94;UBERON:0000033!2.60e-09!123;UBERON:0000062!6.30e-08!511;UBERON:0003056!9.74e-08!61;UBERON:0003688!4.69e-07!6;UBERON:0002358!4.69e-07!6;UBERON:0003684!4.69e-07!6;UBERON:0001178!4.69e-07!6;UBERON:0003076!4.82e-07!15;UBERON:0003057!4.82e-07!15;UBERON:0004121!7.26e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!1.10e-22!115;UBERON:0003075!1.30e-13!86;UBERON:0007284!1.30e-13!86;UBERON:0002616!9.38e-13!59;UBERON:0002346!3.36e-12!90;UBERON:0001049!1.64e-11!57;UBERON:0005068!1.64e-11!57;UBERON:0006241!1.64e-11!57;UBERON:0007135!1.64e-11!57;UBERON:0000475!7.55e-11!365;UBERON:0005743!2.31e-10!86;UBERON:0000955!4.36e-10!69;UBERON:0006238!4.36e-10!69;UBERON:0001017!4.82e-10!82;UBERON:0000153!7.83e-10!129;UBERON:0007811!7.83e-10!129;UBERON:0000073!9.81e-10!94;UBERON:0001016!9.81e-10!94;UBERON:0000033!2.60e-09!123;UBERON:0000062!6.30e-08!511;UBERON:0003056!9.74e-08!61;UBERON:0003688!4.69e-07!6;UBERON:0002358!4.69e-07!6;UBERON:0003684!4.69e-07!6;UBERON:0001178!4.69e-07!6;UBERON:0003076!4.82e-07!15;UBERON:0003057!4.82e-07!15;UBERON:0004121!7.26e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.00e-11;6!UBERON:0002358;2.00e-11;6!UBERON:0003684;2.00e-11;6!UBERON:0001178;2.00e-11;6!UBERON:0004457;3.21e-07;9!UBERON:0000042;3.21e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;2.00e-11;6!UBERON:0002358;2.00e-11;6!UBERON:0003684;2.00e-11;6!UBERON:0001178;2.00e-11;6!UBERON:0004457;3.21e-07;9!UBERON:0000042;3.21e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.05e-11,6;UBERON:0002358,2.05e-11,6;UBERON:0003684,2.05e-11,6;UBERON:0001178,2.05e-11,6;UBERON:0007023,5.09e-11,114;UBERON:0003075,1.33e-07,82;UBERON:0007284,1.33e-07,82;UBERON:0002346,6.21e-07,86 | |||
|phase1_expression=24.8899379600663,11.5614282901131,47.7835429885342,32.0234554730017,5.36353313312745,40.127572108617,0,0,0,1.96587149201207,3.48900583986214,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.861847406537515,5.50801866359483,0,0,0,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.344745680736619,1.29096936716765,0,0.376484679085209,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.869079113764942,0,0.486634870302636,0.0945348171640679,4.87804674417641,13.8778961395139,3.79839318943367,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,6.95760732373446,1.01304409331664,0,0.286836620748814,1.06400514659507,3.92474320099615,1.06748995729705,0.24666754841716,0,0,0,9.68687536927561,9.21881479167998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,11.1221574127094,0.213557388818567,0,9.60291507470087,0.309157587715317,5.92573242104947,1.11670113798954,8.60759294430458,6.13853132515551,5.3011092591264,0.0920498986422993,3.55621325001386,8.52023022039874,5.33986120606493,3.56077243852024,0,0,0,0,0.132529768321485,0.232387885739037,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,4.41026134156626,0,0,0,0,0,3.08822058537346,0,0,0,0,0,0,10.1031939417691,0,38.157825626642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,6.10344096366592,0.36669142910475,2.45616259939778,0,0,0,1.04007436911366,0,0,0,7.86378965119812,2.17048642156577,1.64648067356154,0,2.84313558994037,0,0.904318131178758,0,1.49959486773086,0,0,0,1.91699884393266,1.14861935834114,0,0,0,5.37182889719687,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,5.40724239980099,0.535286966391485,2.68094105557689,0.585707074963566,0,0,0,0,0.553107505625109,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,59.0496582608689,143.793868970915,120.964500700655,81.4964989266258,74.7092583637387,90.560757603851,93.5033818603443,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,5.24823433119529,0,4.12164046590889,0.54941678891006,0.742585499285292,0,0,6.42735719376638,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.858749320451947,0.744316738719335,0.632758849437452,0.571890581771475,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.606547444719948,0,0,1.95053495635836,0.487426979262569,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.430234056612155,2.16147890228867,0,0,0.211107635297664,0.987884678879706,0,0.349934720244983,0,0.670302275535787,0,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6653598399891,0,0,0.586032717087576,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.493217028184668,0,0,4.84666373047609,0.649376687132959,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.482385754501632,1.52581736317083,0.552896299656123,0.886642856860642,1.31631238292384,0,0,1.76985594558733,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,1.88723172345896,0.802577647298789,3.27970224015475,0,0,0,1.57833761139756,3.62972148145992,0.30607276163049,11.9422635497842,0,0,0,0,0,0,0,0,0,3.5277263069176,0,1.92199335066233,0,0,0,0,3.10364852762942,0,1.35588444468319,0,0.19871461170299,2.91229661397042,2.15106521008283,0,1.06726497369676,32.7687759714694,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,6.87624706271931,0,0.837847203816763,2.29160424011684,0,2.39614800598789,0.429226048136571,0.446342914883745,0.335917362433631,1.44119953416961,0,0,0,0.0674035438541849,0,0,0,0.544813624446302,0,0,0,0,0,2.73373004961111,0,0.157611414598396,0.314727528809989,0,0,0.191915197319445,1.42939065274673,0,0.25426853765475,0,0,0,0,0,0,1.92630555584214,0.293104467356165,0,1.16354660725395,0.26446520348538,0.855434189421647,1.40963004463334,14.2027258715034,9.43225830597996,16.983801269235,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0.443716206147409,3.22901295295194,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450772826991655,1.14241563650639,0.406870733204662,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,7.29101410674747,0.521988583930423,0.680117776536817,20.6055002148212,0.244736704506468,0.895444205407437,59.9074807492286,0.219284049578707,0,0,0.337884881306145,0,0,10.0273785538536,0.276516872303462,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0.218419276384028,0,0,0,0,8.90412181829572,0,0,0.352675943690684,37.9744391917968,3.08300280463006,1.416965763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| ||
|short_description=p1@SYT15 | |short_description=p1@SYT15 | ||
}} | }} |
Latest revision as of 07:42, 18 September 2015
Short description: | p1@SYT15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT15_5end |
Coexpression cluster: | C1582_Preadipocyte_mesothelioma_normal_Adipocyte_gastric_Lens_lung |
Association with transcript: | 0bp_to_ENST00000503753_5end |
EntrezGene: | SYT15 |
HGNC: | 17167 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.81e-09 | 76 |
preadipocyte | 3.16e-07 | 12 |
preadipocyte of the breast | 9.04e-07 | 3 |
omentum preadipocyte | 9.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.05e-11 | 6 |
peritoneum | 2.05e-11 | 6 |
abdominal cavity | 2.05e-11 | 6 |
visceral peritoneum | 2.05e-11 | 6 |
adult organism | 5.09e-11 | 114 |
neural plate | 1.33e-07 | 82 |
presumptive neural plate | 1.33e-07 | 82 |
neurectoderm | 6.21e-07 | 86 |