FFCP PHASE1:Hg19::chr8:42045498..42045512,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9051 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_ENST00000521042_5end | |||
|cluster_id=chr8:42045498..42045512,- | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_6_at_PLAT_5end | |||
|id=chr8:42045498..42045512,- | |||
|ontology_enrichment_celltype=CL:0000183!1.24e-14!59;CL:0000192!3.07e-14!42;CL:0000514!3.07e-14!42;CL:0000680!4.56e-13!57;CL:0000056!4.56e-13!57;CL:0000355!4.56e-13!57;CL:0000187!5.19e-13!54;CL:0000055!1.90e-12!180;CL:0000359!4.47e-11!32;CL:0000393!7.50e-11!60;CL:0000211!7.50e-11!60;CL:0000222!5.14e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.75e-16;5!CL:0000192;1.23e-12;43!CL:0000359;3.31e-12;32!CL:0002591;2.16e-10;1!CL:0002379;3.39e-10;1!CL:1000306;1.22e-09;4!CL:0002547;1.22e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.89e-16,5;CL:0000192,4.38e-15,43;CL:0000514,4.38e-15,43;CL:0000359,1.05e-12,32;CL:0000187,1.62e-11,55;CL:0000680,7.44e-11,58;CL:0000056,7.44e-11,58;CL:0000355,7.44e-11,58;CL:0002591,2.16e-10,1;CL:0000393,2.94e-10,61;CL:0000211,2.94e-10,61;CL:0002379,3.40e-10,1;CL:1000306,1.03e-09,4;CL:0002547,1.03e-09,4;CL:0000222,7.14e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.23e-12;43!UBERON:0005795;1.02e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.93e-28;3!DOID:127;8.93e-28;3!DOID:0060072;5.35e-21;4!DOID:3620;3.39e-10;1!DOID:3565;3.39e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.35e-28,3;DOID:127,9.35e-28,3;DOID:0060072,5.54e-21,4;DOID:3620,3.40e-10,1;DOID:3565,3.40e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.74e-16!143;UBERON:0001637!4.67e-15!42;UBERON:0003509!4.67e-15!42;UBERON:0004572!4.67e-15!42;UBERON:0000914!4.38e-14!83;UBERON:0002329!4.38e-14!83;UBERON:0003077!4.38e-14!83;UBERON:0003059!4.38e-14!83;UBERON:0007282!4.38e-14!83;UBERON:0009618!4.38e-14!83;UBERON:0007285!4.38e-14!83;UBERON:0000119!5.18e-14!312;UBERON:0000483!9.99e-14!309;UBERON:0004573!5.90e-13!33;UBERON:0004571!5.90e-13!33;UBERON:0004290!1.53e-12!70;UBERON:0001134!1.27e-11!61;UBERON:0002036!1.27e-11!61;UBERON:0003082!1.27e-11!61;UBERON:0002385!5.63e-11!63;UBERON:0001015!5.63e-11!63;UBERON:0000383!5.63e-11!63;UBERON:0000481!7.18e-11!347;UBERON:0002100!1.01e-10!216;UBERON:0000477!1.60e-10!286;UBERON:0003914!2.46e-10!118;UBERON:0002049!3.16e-10!79;UBERON:0007798!3.16e-10!79;UBERON:0000486!3.98e-10!82;UBERON:0001981!5.41e-10!60;UBERON:0007500!5.41e-10!60;UBERON:0004537!5.41e-10!60;UBERON:0006965!5.41e-10!60;UBERON:0000475!4.59e-09!365;UBERON:0004872!7.80e-09!84;UBERON:0000490!9.72e-09!138;UBERON:0000055!1.52e-08!69;UBERON:0004535!2.81e-08!110;UBERON:0003104!3.94e-08!238;UBERON:0009142!3.94e-08!238;UBERON:0004111!4.40e-08!241;UBERON:0001009!8.69e-08!113;UBERON:0003498!1.91e-07!5;UBERON:0005985!1.91e-07!5;UBERON:0000025!2.87e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;3.51e-20;7!UBERON:0003834;1.75e-16;5!UBERON:0001533;1.75e-16;5!UBERON:0004573;1.32e-13;33!UBERON:0004571;1.32e-13;33!UBERON:0001637;8.47e-13;42!UBERON:0003509;8.47e-13;42!UBERON:0004572;8.47e-13;42!UBERON:0004797;1.22e-09;4!UBERON:0000415;1.22e-09;4!UBERON:0007240;1.22e-09;4!UBERON:0005742;1.22e-09;4!UBERON:0005734;1.22e-09;4!UBERON:0004664;1.22e-09;4!UBERON:0004663;1.22e-09;4!UBERON:0007500;1.28e-08;56!UBERON:0001981;1.28e-08;56!UBERON:0004537;1.28e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,3.97e-20,7;UBERON:0003834,1.89e-16,5;UBERON:0001533,1.89e-16,5;UBERON:0004573,6.39e-16,33;UBERON:0004571,6.39e-16,33;UBERON:0001637,1.32e-15,42;UBERON:0003509,1.32e-15,42;UBERON:0004572,1.32e-15,42;UBERON:0007500,3.03e-13,59;UBERON:0001981,3.03e-13,59;UBERON:0004537,3.03e-13,59;UBERON:0006965,3.03e-13,59;UBERON:0000055,2.73e-11,68;UBERON:0004872,6.60e-11,83;UBERON:0001134,4.52e-10,62;UBERON:0002036,4.52e-10,62;UBERON:0003082,4.52e-10,62;UBERON:0002385,1.02e-09,64;UBERON:0001015,1.02e-09,64;UBERON:0000383,1.02e-09,64;UBERON:0000415,1.03e-09,4;UBERON:0007240,1.03e-09,4;UBERON:0005742,1.03e-09,4;UBERON:0005734,1.03e-09,4;UBERON:0004664,1.03e-09,4;UBERON:0004663,1.03e-09,4;UBERON:0002049,1.21e-09,78;UBERON:0007798,1.21e-09,78;UBERON:0002329,1.24e-08,71;UBERON:0003059,1.24e-08,71;UBERON:0007282,1.24e-08,71;UBERON:0004290,1.24e-08,71;UBERON:0009618,1.24e-08,71;UBERON:0003077,1.71e-08,72;UBERON:0007285,1.71e-08,72;UBERON:0007524,2.32e-08,73;UBERON:0003498,4.61e-08,5;UBERON:0005985,4.61e-08,5;UBERON:0004535,6.97e-08,109;UBERON:0007503,9.65e-08,78;UBERON:0001009,1.26e-07,112;UBERON:0003914,3.18e-07,117;UBERON:0000486,3.37e-07,83;UBERON:0005256,8.58e-07,122 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0,0,0.408001382488506,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,4.30254931123221,1.77334191099179,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.421352420106746,0,0,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0.411309970813294,0,0.285826432630578,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,1.50719688529793,0,0.199945982364114,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0.160853921143607,0,0,0.355123450626254,0,0,0.232420756919918,0,0.802025881213139,0,1.26295892981067,0.182091168006717,0.786746489756545,0.451199612907412,0,0,0,0,0,0.340187410553031,0,0,0.812839312631559,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,2.83331112147576,0.6970372701606,0.616067160352178,0.532306030317022,0,0.37064843820784,1.5743737541619,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,1.09814811894422,0.706874414074119,0.404364963146632,3.17020642346017,0.842516912477962,0,0.731140468893853,9.50851320810799,0.409499734223957,1.69686518344455,7.910568163417,0,1.32687795048244,6.57676327880644,0,0,0,0.6196469961995,0.563391205064483,0,0,0,0,0.422215270595328,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.157363764404994,0,0.179287339332845,0,0,0,0,6.51599522104455,10.3706578944152,11.7571449639387,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0.124980407962107,0.151649117541648,0.285465333544967,3.76425311517075,0,0,0,0,0,0,0,0,0,1.51230923763239,0.466311601748341,0.147855149989634,0.159296767163702,0,0,0.829412415681711,0.265841714557995,0,0,3.80805212168795,0,0.181848659202559,0,0,0.796191777397232,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,2.1437183414724,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@PLAT | |||
}} |
Latest revision as of 07:36, 18 September 2015
Short description: | p6@PLAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLAT_5end |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | -48bp_to_ENST00000521042_5end |
EntrezGene: | PLAT |
HGNC: | 9051 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.89e-16 | 5 |
smooth muscle cell | 4.38e-15 | 43 |
smooth muscle myoblast | 4.38e-15 | 43 |
vascular associated smooth muscle cell | 1.05e-12 | 32 |
muscle cell | 1.62e-11 | 55 |
muscle precursor cell | 7.44e-11 | 58 |
myoblast | 7.44e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.44e-11 | 58 |
smooth muscle cell of the pulmonary artery | 2.16e-10 | 1 |
electrically responsive cell | 2.94e-10 | 61 |
electrically active cell | 2.94e-10 | 61 |
meningothelial cell | 3.40e-10 | 1 |
fibroblast of tunica adventitia of artery | 1.03e-09 | 4 |
fibroblast of the aortic adventitia | 1.03e-09 | 4 |
mesodermal cell | 7.14e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.35e-28 | 3 |
leiomyoma | 9.35e-28 | 3 |
benign neoplasm | 5.54e-21 | 4 |
central nervous system cancer | 3.40e-10 | 1 |
meningioma | 3.40e-10 | 1 |