FFCP PHASE1:Hg19::chr10:46090208..46090333,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220972 | |EntrezGene=220972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23356 | |HGNC=23356 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T0T0 | |UniProt=Q5T0T0 | ||
|association_with_transcript=20bp_to_ENST00000319836,ENST00000395771,NM_001002265,NM_145021,uc001jcj.1,uc001jck.1_5end | |association_with_transcript=20bp_to_ENST00000319836,ENST00000395771,NM_001002265,NM_145021,uc001jcj.1,uc001jck.1_5end | ||
|cluster_id=chr10:46090208..46090333,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_1_at_MARCH8_5end | |description=CAGE_peak_1_at_MARCH8_5end | ||
|id=chr10:46090208..46090333,- | |id=chr10:46090208..46090333,- | ||
|ontology_enrichment_celltype=CL:0000738!2.64e-12!140;CL:0002031!7.00e-10!124;CL:0000037!6.77e-09!172;CL:0000566!6.77e-09!172;CL:0002087!1.42e-08!119;CL:0000988!2.61e-08!182;CL:0002032!5.23e-08!165;CL:0000837!5.23e-08!165;CL:0000791!1.35e-07!18;CL:0000789!1.35e-07!18;CL:0002420!1.35e-07!18;CL:0002419!1.35e-07!18;CL:0000790!1.35e-07!18;CL:0000766!2.96e-07!76 | |ontology_enrichment_celltype=CL:0000738!2.64e-12!140;CL:0002031!7.00e-10!124;CL:0000037!6.77e-09!172;CL:0000566!6.77e-09!172;CL:0002087!1.42e-08!119;CL:0000988!2.61e-08!182;CL:0002032!5.23e-08!165;CL:0000837!5.23e-08!165;CL:0000791!1.35e-07!18;CL:0000789!1.35e-07!18;CL:0002420!1.35e-07!18;CL:0002419!1.35e-07!18;CL:0000790!1.35e-07!18;CL:0000766!2.96e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.42e-07;18!CL:0000789;1.42e-07;18!CL:0002419;1.42e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.98e-13,136;CL:0002031,9.30e-11,120;CL:0000037,1.45e-09,168;CL:0002087,2.18e-09,115;CL:0000988,5.94e-09,177;CL:0002032,1.21e-08,161;CL:0000837,1.21e-08,161;CL:0000766,3.34e-08,72;CL:0000791,1.35e-07,18;CL:0000789,1.35e-07,18;CL:0002420,1.35e-07,18;CL:0002419,1.35e-07,18;CL:0000790,1.35e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.42e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.91e-28!115;UBERON:0001049!2.96e-11!57;UBERON:0005068!2.96e-11!57;UBERON:0006241!2.96e-11!57;UBERON:0007135!2.96e-11!57;UBERON:0002193!1.16e-10!112;UBERON:0002616!3.23e-10!59;UBERON:0002390!1.79e-09!102;UBERON:0003061!1.79e-09!102;UBERON:0000955!6.46e-09!69;UBERON:0006238!6.46e-09!69;UBERON:0001017!2.85e-07!82;UBERON:0003080!3.54e-07!42;UBERON:0002780!3.85e-07!41;UBERON:0001890!3.85e-07!41;UBERON:0006240!3.85e-07!41;UBERON:0002405!6.94e-07!115;UBERON:0005743!9.96e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!6.91e-28!115;UBERON:0001049!2.96e-11!57;UBERON:0005068!2.96e-11!57;UBERON:0006241!2.96e-11!57;UBERON:0007135!2.96e-11!57;UBERON:0002193!1.16e-10!112;UBERON:0002616!3.23e-10!59;UBERON:0002390!1.79e-09!102;UBERON:0003061!1.79e-09!102;UBERON:0000955!6.46e-09!69;UBERON:0006238!6.46e-09!69;UBERON:0001017!2.85e-07!82;UBERON:0003080!3.54e-07!42;UBERON:0002780!3.85e-07!41;UBERON:0001890!3.85e-07!41;UBERON:0006240!3.85e-07!41;UBERON:0002405!6.94e-07!115;UBERON:0005743!9.96e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.10e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.18e-27,114;UBERON:0002193,1.24e-11,108;UBERON:0001049,3.15e-11,56;UBERON:0005068,3.15e-11,56;UBERON:0006241,3.15e-11,56;UBERON:0007135,3.15e-11,56;UBERON:0002390,2.01e-10,98;UBERON:0003061,2.01e-10,98;UBERON:0000073,3.77e-10,53;UBERON:0002616,3.77e-10,53;UBERON:0000955,7.24e-09,68;UBERON:0006238,7.24e-09,68;UBERON:0002405,8.19e-08,93;UBERON:0001017,3.25e-07,81;UBERON:0002780,3.85e-07,41;UBERON:0001890,3.85e-07,41;UBERON:0003080,3.85e-07,41;UBERON:0006240,3.85e-07,41;UBERON:0001016,4.69e-07,89;UBERON:0003075,9.04e-07,82;UBERON:0007284,9.04e-07,82 | |||
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| ||
|short_description=p1@MARCH8 | |short_description=p1@MARCH8 | ||
}} | }} |
Latest revision as of 07:32, 18 September 2015
Short description: | p1@MARCH8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MARCH8_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 20bp_to_ENST00000319836, ENST00000395771, NM_001002265, NM_145021, uc001jcj.1, uc001jck.1_5end |
EntrezGene: | MARCH8 |
HGNC: | 23356 |
UniProt: | Q5T0T0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.98e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 9.30e-11 | 120 |
hematopoietic stem cell | 1.45e-09 | 168 |
nongranular leukocyte | 2.18e-09 | 115 |
hematopoietic cell | 5.94e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.21e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-08 | 161 |
myeloid leukocyte | 3.34e-08 | 72 |
mature alpha-beta T cell | 1.35e-07 | 18 |
alpha-beta T cell | 1.35e-07 | 18 |
immature T cell | 1.35e-07 | 18 |
mature T cell | 1.35e-07 | 18 |
immature alpha-beta T cell | 1.35e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.18e-27 | 114 |
hemolymphoid system | 1.24e-11 | 108 |
neural tube | 3.15e-11 | 56 |
neural rod | 3.15e-11 | 56 |
future spinal cord | 3.15e-11 | 56 |
neural keel | 3.15e-11 | 56 |
hematopoietic system | 2.01e-10 | 98 |
blood island | 2.01e-10 | 98 |
regional part of nervous system | 3.77e-10 | 53 |
regional part of brain | 3.77e-10 | 53 |
brain | 7.24e-09 | 68 |
future brain | 7.24e-09 | 68 |
immune system | 8.19e-08 | 93 |
central nervous system | 3.25e-07 | 81 |
regional part of forebrain | 3.85e-07 | 41 |
forebrain | 3.85e-07 | 41 |
anterior neural tube | 3.85e-07 | 41 |
future forebrain | 3.85e-07 | 41 |
nervous system | 4.69e-07 | 89 |
neural plate | 9.04e-07 | 82 |
presumptive neural plate | 9.04e-07 | 82 |