FFCP PHASE1:Hg19::chr10:45869615..45869647,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:45869615..45869647,+ to FFCP PHASE1:Hg19::chr10:45869615..45869647,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=240 | |EntrezGene=240 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=435 | |HGNC=435 | ||
|TSSclassifier=strong | |||
|UniProt=P09917 | |UniProt=P09917 | ||
|association_with_transcript=0bp_to_NM_000698,uc001jce.2,uc009xmt.2,uc010qfg.1_5end | |||
|cluster_id=chr10:45869615..45869647,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_ALOX5_5end | |||
|id=chr10:45869615..45869647,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.38e-52!140;CL:0000037!4.65e-47!172;CL:0000566!4.65e-47!172;CL:0002032!5.29e-45!165;CL:0000837!5.29e-45!165;CL:0000988!2.26e-42!182;CL:0002031!8.03e-42!124;CL:0000766!2.13e-41!76;CL:0002087!1.84e-38!119;CL:0000557!3.78e-37!71;CL:0000763!8.97e-37!112;CL:0000049!8.97e-37!112;CL:0000839!2.27e-35!70;CL:0002009!5.74e-33!65;CL:0002194!2.31e-31!63;CL:0000576!2.31e-31!63;CL:0000040!2.31e-31!63;CL:0000559!2.31e-31!63;CL:0002057!1.61e-30!42;CL:0000860!1.36e-29!45;CL:0000945!5.47e-10!24;CL:0000826!5.47e-10!24;CL:0000236!6.24e-10!14;CL:0000542!4.57e-08!53;CL:0000051!4.57e-08!53;CL:0000838!1.05e-07!52;CL:0000094!2.12e-07!8;CL:0002393!2.90e-07!9;CL:0002397!2.90e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.70e-27;33!CL:0002057;5.70e-27;33!CL:0000473;9.12e-26;39!CL:0000234;9.12e-26;39!CL:0000576;1.70e-25;48!CL:0000766;1.95e-23;69!CL:0002087;6.83e-13;104!CL:0000738;7.51e-13;136!CL:0000236;1.08e-11;13!CL:0000763;4.80e-11;100!CL:0000945;7.86e-10;24!CL:0000094;1.18e-08;8!CL:0000988;5.91e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.58e-56,136;CL:0000766,9.54e-51,72;CL:0000037,1.06e-46,168;CL:0000557,1.55e-45,67;CL:0002032,9.76e-45,161;CL:0000837,9.76e-45,161;CL:0002031,1.81e-44,120;CL:0000839,2.52e-43,66;CL:0000988,1.22e-42,177;CL:0002087,1.55e-40,115;CL:0000473,1.83e-40,48;CL:0000234,1.83e-40,48;CL:0002009,1.99e-40,61;CL:0000763,3.69e-40,108;CL:0000049,3.69e-40,108;CL:0002194,1.86e-38,59;CL:0000576,1.86e-38,59;CL:0000040,1.86e-38,59;CL:0000559,1.86e-38,59;CL:0000860,1.10e-36,42;CL:0002057,1.10e-36,42;CL:0000236,1.05e-11,14;CL:0000945,7.47e-10,24;CL:0000826,7.47e-10,24;CL:0000094,1.22e-08,8;CL:0002393,1.78e-08,9;CL:0002397,1.78e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-26;42!CL:0000049;4.93e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.33e-36!102;UBERON:0003061!7.33e-36!102;UBERON:0002193!3.05e-31!112;UBERON:0007023!4.36e-31!115;UBERON:0002371!1.37e-30!80;UBERON:0001474!1.16e-26!86;UBERON:0004765!1.48e-19!101;UBERON:0001434!1.48e-19!101;UBERON:0002405!6.81e-19!115;UBERON:0001049!2.17e-08!57;UBERON:0005068!2.17e-08!57;UBERON:0006241!2.17e-08!57;UBERON:0007135!2.17e-08!57;UBERON:0003081!6.75e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.83e-08;114!UBERON:0000178;2.55e-07;15!UBERON:0000179;2.55e-07;15!UBERON:0000463;2.55e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.37e-43,98;UBERON:0003061,3.37e-43,98;UBERON:0002193,1.13e-38,108;UBERON:0002371,8.54e-37,76;UBERON:0001474,4.32e-32,82;UBERON:0002405,5.60e-32,93;UBERON:0007023,6.81e-31,114;UBERON:0004765,7.26e-27,90;UBERON:0001434,2.60e-22,100;UBERON:0003081,2.08e-11,203;UBERON:0000178,2.51e-07,15;UBERON:0000179,2.51e-07,15;UBERON:0000463,2.51e-07,15;UBERON:0001049,7.00e-07,56;UBERON:0005068,7.00e-07,56;UBERON:0006241,7.00e-07,56;UBERON:0007135,7.00e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.273748850145768,0,1.68109492645493,0.410502947249729,0.550975469195755,37.3696063006459,13.0501995353052,42.2648016652888,0,0,0,25.176840188598,20.898877175651,0.293600439334847,46.5356143166777,50.1361118675354,35.5897827973997,23.2872093209521,24.6159186174424,35.5454283335177,43.0378786787512,46.8566170174124,59.433094991015,32.3076361298902,36.5939420339425,36.5453517656222,38.263088178846,46.3650878817672,43.0397658397225,38.6115162425013,45.1839278508678,27.0852973188684,38.589679606234,36.8423302578092,31.910734791202,51.1160100259407,44.9300637906531,42.1962503027367,56.0747210317417,62.0331975203275,66.0648363325676,46.723687419202,44.8234327506,36.1236904417433,40.4510351063357,56.8416381078019,44.9580908539591,27.848377121135,45.666426862458,30.3803891943249,34.8571222414704,29.339393395176,32.4970900537983,44.0328234094261,36.3428080676445,50.7892853962773,28.2162616303836,32.4234183834517,29.5915929098707,38.719173781491,38.7758413996113,43.5859534393142,37.9789898084191,44.0435585739614,45.9801951963587,37.6795577487371,38.1621501814146,36.4296300230047,27.0129107110632,41.6677818656499,2.64342657158052,3.92355994087075,1.05353633910031,1.37696839079683,2.75107533924415,1.43921049299656,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.384273959177026,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0,2.86708872891687,0,0,2.25862678616659,3.32765189001488,3.74792179657038,2.36777252044017,1.64225599384209,0.604820229674197,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,4.25681995367566,0,0,0.324547393654683,0,0.531831842075461,3.10037811596945,4.0039643754609,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,69.8436212411135,120.211881885981,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.731842236777572,0.397589304964456,1.85910308591229,1.14027160516907,2.01856680700503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,2.36315962672562,0,0,1.20097467208968,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,19.9435774930792,8.89216207529103,36.8605282476046,0,0.16798212819886,0.283550194484773,0,0,0,175.388112690956,52.9171088419489,40.6363106459913,58.3685811338694,40.7763059967207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,10.0451418286425,14.7583757638122,0,0,0,0,0,0,0,2.56139988262505,0.215627574859517,1.79680250791648,0.508189248444927,0,0,0.335032530668698,0.637938751653163,56.1755267960387,80.7735939850867,99.0453077112125,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9211380114623,25.4542756965968,13.5543998410374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.276242966807689,0,0,0,4.06079651616671,1.5403067420883,0.784349769176855,0,0.633309773357254,0,0,0,0,0.541892875087706,1.00337954770971,1.78413391131527,0.831076008928724,0.895499018888713,1.31555925987561,1.3071772551245,0,0.328014645699706,0,3.60643540767028,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,2.44773882019626,0,3.36942951335251,1.7737206141467,0.459446800413919,39.073465910877,31.3501254928374,39.3056559150172,21.6790915666588,26.7385477506026,49.2839716506465,28.081634736382,29.345631522888,0,0,3.43056302373444,6.68891430452587,12.8399599549036,0.142283686696828,0,3.39284931435788,4.78763425330917,0,0,0.561594356226918,0,2.6635582281414,0,0,0,0.201799707191048,3.40676990152261,7.90062292938259,3.07240764308458,3.13146551049382,4.50492682622153,0,0.278406173895242,3.69262196843137,0,0,0,2.8071081061233,2.19762268907841,0,0,0,0.95497793895076,1.78178808499583,0.307160702099232,0.994147647766298,2.67271891179974,0,0,0,3.18796781201712,13.5379118610262,0.755798243562828,0,0,0,0,4.65455054156584,0,6.21453455512682,35.922463852041,0,4.84666373047609,1.57705766875147,0,0,0,3.62499787717397,0,0,0,1.03423011972439,0.291604613383254,0.347249989866585,1.77148277162768,1.32656082487949,15.2581736317083,12.3848771122972,5.31985714116385,1.75508317723178,0,0.139423744278603,2.5393585306253,0,3.91958637459702,5.65473159781564,3.58536327342627,2.23300811812344,1.00757352742049,6.39641731222362,0,1.2558420511602,0.332423363800313,0.451191321234361,0.19606253431774,0.335643173951685,0,0.476809736941136,0,1.30586246527318,0,0,5.97157158647103,4.15750553165694,0.611030144933625,0,0,0,3.97666684585995,2.40773294189637,0.702793337176017,17.1507501862726,0.782658475728359,0,1.18375320854817,1.20990716048664,0.30607276163049,15.8598314867505,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,2.79562669187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| 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| ||
|short_description=p2@ALOX5 | |||
}} | }} |
Latest revision as of 07:20, 18 September 2015
Short description: | p2@ALOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALOX5_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_NM_000698, uc001jce.2, uc009xmt.2, uc010qfg.1_5end |
EntrezGene: | ALOX5 |
HGNC: | 435 |
UniProt: | P09917 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.58e-56 | 136 |
myeloid leukocyte | 9.54e-51 | 72 |
hematopoietic stem cell | 1.06e-46 | 168 |
granulocyte monocyte progenitor cell | 1.55e-45 | 67 |
hematopoietic oligopotent progenitor cell | 9.76e-45 | 161 |
hematopoietic multipotent progenitor cell | 9.76e-45 | 161 |
hematopoietic lineage restricted progenitor cell | 1.81e-44 | 120 |
myeloid lineage restricted progenitor cell | 2.52e-43 | 66 |
hematopoietic cell | 1.22e-42 | 177 |
nongranular leukocyte | 1.55e-40 | 115 |
defensive cell | 1.83e-40 | 48 |
phagocyte | 1.83e-40 | 48 |
macrophage dendritic cell progenitor | 1.99e-40 | 61 |
myeloid cell | 3.69e-40 | 108 |
common myeloid progenitor | 3.69e-40 | 108 |
monopoietic cell | 1.86e-38 | 59 |
monocyte | 1.86e-38 | 59 |
monoblast | 1.86e-38 | 59 |
promonocyte | 1.86e-38 | 59 |
classical monocyte | 1.10e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-36 | 42 |
B cell | 1.05e-11 | 14 |
lymphocyte of B lineage | 7.47e-10 | 24 |
pro-B cell | 7.47e-10 | 24 |
granulocyte | 1.22e-08 | 8 |
intermediate monocyte | 1.78e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.78e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.37e-43 | 98 |
blood island | 3.37e-43 | 98 |
hemolymphoid system | 1.13e-38 | 108 |
bone marrow | 8.54e-37 | 76 |
bone element | 4.32e-32 | 82 |
immune system | 5.60e-32 | 93 |
adult organism | 6.81e-31 | 114 |
skeletal element | 7.26e-27 | 90 |
skeletal system | 2.60e-22 | 100 |
lateral plate mesoderm | 2.08e-11 | 203 |
blood | 2.51e-07 | 15 |
haemolymphatic fluid | 2.51e-07 | 15 |
organism substance | 2.51e-07 | 15 |
neural tube | 7.00e-07 | 56 |
neural rod | 7.00e-07 | 56 |
future spinal cord | 7.00e-07 | 56 |
neural keel | 7.00e-07 | 56 |