FFCP PHASE1:Hg19::chr5:58335281..58335327,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |UniProt=Q08499 | ||
|association_with_transcript=11bp_to_ENST00000358923,NM_001197221,NM_001197222,uc003jrt.2_5end | |association_with_transcript=11bp_to_ENST00000358923,NM_001197221,NM_001197222,uc003jrt.2_5end | ||
|cluster_id=chr5:58335281..58335327,- | |||
|coexpression_cluster_id=C2824 | |coexpression_cluster_id=C2824 | ||
|description=CAGE_peak_3_at_PDE4D_5end | |description=CAGE_peak_3_at_PDE4D_5end | ||
|id=chr5:58335281..58335327,- | |id=chr5:58335281..58335327,- | ||
|ontology_enrichment_celltype=CL:0000084!4.51e-12!25;CL:0000827!4.51e-12!25;CL:0002057!1.36e-10!42;CL:0000791!4.07e-10!18;CL:0000789!4.07e-10!18;CL:0002420!4.07e-10!18;CL:0002419!4.07e-10!18;CL:0000790!4.07e-10!18;CL:0000738!2.56e-09!140;CL:0000860!4.59e-09!45;CL:0000037!6.50e-08!172;CL:0000566!6.50e-08!172;CL:0002087!8.50e-08!119;CL:0002320!9.99e-08!365;CL:0000048!1.94e-07!430;CL:0000988!3.03e-07!182;CL:0000134!3.52e-07!358 | |ontology_enrichment_celltype=CL:0000084!4.51e-12!25;CL:0000827!4.51e-12!25;CL:0002057!1.36e-10!42;CL:0000791!4.07e-10!18;CL:0000789!4.07e-10!18;CL:0002420!4.07e-10!18;CL:0002419!4.07e-10!18;CL:0000790!4.07e-10!18;CL:0000738!2.56e-09!140;CL:0000860!4.59e-09!45;CL:0000037!6.50e-08!172;CL:0000566!6.50e-08!172;CL:0002087!8.50e-08!119;CL:0002320!9.99e-08!365;CL:0000048!1.94e-07!430;CL:0000988!3.03e-07!182;CL:0000134!3.52e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.06e-14;25!CL:0000791;3.03e-12;18!CL:0000789;3.03e-12;18!CL:0002419;3.03e-12;18!CL:0000860;9.27e-10;33!CL:0002057;9.27e-10;33!CL:0000625;8.38e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.40e-14,25;CL:0000827,1.40e-14,25;CL:0000738,4.58e-13,136;CL:0000791,3.64e-12,18;CL:0000789,3.64e-12,18;CL:0002420,3.64e-12,18;CL:0002419,3.64e-12,18;CL:0000790,3.64e-12,18;CL:0002087,9.34e-12,115;CL:0000860,1.41e-11,42;CL:0002057,1.41e-11,42;CL:0000037,1.42e-11,168;CL:0000988,1.35e-10,177;CL:0000473,3.16e-09,48;CL:0000234,3.16e-09,48;CL:0002032,4.87e-09,161;CL:0000837,4.87e-09,161;CL:0002320,1.07e-08,361;CL:0002031,1.38e-08,120;CL:0000134,5.34e-08,354;CL:0000048,1.20e-07,427;CL:0000766,1.36e-07,72;CL:0000723,4.13e-07,433;CL:0000034,6.39e-07,441;CL:0000625,9.30e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.03e-12;18!CL:0002057;1.57e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.32e-09!102;UBERON:0003061!1.32e-09!102;UBERON:0002384!4.75e-08!375;UBERON:0002193!1.02e-07!112;UBERON:0002204!3.51e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!1.32e-09!102;UBERON:0003061!1.32e-09!102;UBERON:0002384!4.75e-08!375;UBERON:0002193!1.02e-07!112;UBERON:0002204!3.51e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.22e-11,98;UBERON:0003061,5.22e-11,98;UBERON:0002384,3.38e-09,371;UBERON:0002193,1.41e-08,108;UBERON:0002204,7.11e-07,167 | |||
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| ||
|short_description=p3@PDE4D | |short_description=p3@PDE4D | ||
}} | }} |
Latest revision as of 07:10, 18 September 2015
Short description: | p3@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDE4D_5end |
Coexpression cluster: | C2824_CD4_CD8_heart_skeletal_Natural_Basophils_Peripheral |
Association with transcript: | 11bp_to_ENST00000358923, NM_001197221, NM_001197222, uc003jrt.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.40e-14 | 25 |
pro-T cell | 1.40e-14 | 25 |
leukocyte | 4.58e-13 | 136 |
mature alpha-beta T cell | 3.64e-12 | 18 |
alpha-beta T cell | 3.64e-12 | 18 |
immature T cell | 3.64e-12 | 18 |
mature T cell | 3.64e-12 | 18 |
immature alpha-beta T cell | 3.64e-12 | 18 |
nongranular leukocyte | 9.34e-12 | 115 |
classical monocyte | 1.41e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-11 | 42 |
hematopoietic stem cell | 1.42e-11 | 168 |
hematopoietic cell | 1.35e-10 | 177 |
defensive cell | 3.16e-09 | 48 |
phagocyte | 3.16e-09 | 48 |
hematopoietic oligopotent progenitor cell | 4.87e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.87e-09 | 161 |
connective tissue cell | 1.07e-08 | 361 |
hematopoietic lineage restricted progenitor cell | 1.38e-08 | 120 |
mesenchymal cell | 5.34e-08 | 354 |
multi fate stem cell | 1.20e-07 | 427 |
myeloid leukocyte | 1.36e-07 | 72 |
somatic stem cell | 4.13e-07 | 433 |
stem cell | 6.39e-07 | 441 |
CD8-positive, alpha-beta T cell | 9.30e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.22e-11 | 98 |
blood island | 5.22e-11 | 98 |
connective tissue | 3.38e-09 | 371 |
hemolymphoid system | 1.41e-08 | 108 |
musculoskeletal system | 7.11e-07 | 167 |