FFCP PHASE1:Hg19::chr19:42392046..42392054,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9138 | |EntrezGene=9138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=681 | |HGNC=681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-99bp_to_AB590439,DQ893592,DQ895004,EU832644,EU832721_5end | |association_with_transcript=-99bp_to_AB590439,DQ893592,DQ895004,EU832644,EU832721_5end | ||
|cluster_id=chr19:42392046..42392054,+ | |||
|description=CAGE_peak_31_at_ARHGEF1_5end | |description=CAGE_peak_31_at_ARHGEF1_5end | ||
|id=chr19:42392046..42392054,+ | |id=chr19:42392046..42392054,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.42e-16!18;CL:0000789!1.42e-16!18;CL:0002420!1.42e-16!18;CL:0002419!1.42e-16!18;CL:0000790!1.42e-16!18;CL:0000084!2.70e-13!25;CL:0000827!2.70e-13!25;CL:0000625!7.63e-12!11;CL:0000838!2.07e-09!52;CL:0000542!3.68e-09!53;CL:0000051!3.68e-09!53;CL:0000623!4.93e-08!3;CL:0000825!4.93e-08!3;CL:0000624!1.81e-07!6 | |ontology_enrichment_celltype=CL:0000791!1.42e-16!18;CL:0000789!1.42e-16!18;CL:0002420!1.42e-16!18;CL:0002419!1.42e-16!18;CL:0000790!1.42e-16!18;CL:0000084!2.70e-13!25;CL:0000827!2.70e-13!25;CL:0000625!7.63e-12!11;CL:0000838!2.07e-09!52;CL:0000542!3.68e-09!53;CL:0000051!3.68e-09!53;CL:0000623!4.93e-08!3;CL:0000825!4.93e-08!3;CL:0000624!1.81e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002032;4.66e-21;1!CL:0000557;4.66e-21;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.66e-21;1!UBERON:0010122;3.18e-11;2!UBERON:0003056;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.49e-38!57;UBERON:0005068!5.49e-38!57;UBERON:0006241!5.49e-38!57;UBERON:0007135!5.49e-38!57;UBERON:0002616!2.85e-31!59;UBERON:0001893!1.20e-29!34;UBERON:0007023!1.31e-29!115;UBERON:0000955!2.61e-29!69;UBERON:0006238!2.61e-29!69;UBERON:0002780!3.07e-29!41;UBERON:0001890!3.07e-29!41;UBERON:0006240!3.07e-29!41;UBERON:0001017!3.34e-29!82;UBERON:0002020!4.00e-29!34;UBERON:0003528!4.00e-29!34;UBERON:0003080!2.09e-28!42;UBERON:0002791!1.17e-27!33;UBERON:0005743!1.93e-27!86;UBERON:0000073!7.19e-26!94;UBERON:0001016!7.19e-26!94;UBERON:0001869!2.96e-25!32;UBERON:0003075!2.12e-22!86;UBERON:0007284!2.12e-22!86;UBERON:0002346!4.85e-21!90;UBERON:0001950!6.77e-19!20;UBERON:0002308!6.87e-19!9;UBERON:0000125!6.87e-19!9;UBERON:0003056!9.90e-18!61;UBERON:0002619!5.64e-17!22;UBERON:0002298!2.91e-16!8;UBERON:0000200!7.37e-16!6;UBERON:0000153!2.82e-15!129;UBERON:0007811!2.82e-15!129;UBERON:0000033!3.04e-15!123;UBERON:0002420!1.11e-14!9;UBERON:0007245!1.11e-14!9;UBERON:0010009!1.11e-14!9;UBERON:0010011!1.11e-14!9;UBERON:0000454!1.11e-14!9;UBERON:0000956!1.18e-14!25;UBERON:0000203!1.18e-14!25;UBERON:0009663!1.33e-14!7;UBERON:0004121!2.30e-11!169;UBERON:0000924!6.65e-11!173;UBERON:0006601!6.65e-11!173;UBERON:0003076!1.57e-10!15;UBERON:0003057!1.57e-10!15;UBERON:0004732!1.35e-09!13;UBERON:0001896!4.29e-09!3;UBERON:0005290!4.29e-09!3;UBERON:0010096!4.29e-09!3;UBERON:0006331!1.05e-08!3;UBERON:0000988!1.23e-08!3;UBERON:0002771!1.45e-08!3;UBERON:0001871!6.04e-08!7;UBERON:0004733!1.21e-07!12;UBERON:0002028!1.21e-07!12;UBERON:0007277!1.21e-07!12;UBERON:0005162!2.62e-07!2;UBERON:0000122!2.62e-07!2;UBERON:0001897!4.71e-07!2;UBERON:0000369!5.54e-07!4;UBERON:0002435!5.54e-07!4;UBERON:0000204!5.54e-07!4;UBERON:0010082!5.54e-07!4;UBERON:0001870!6.11e-07!2;UBERON:0001875!6.28e-07!2;UBERON:0006514!6.28e-07!2;UBERON:0000025!6.76e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.10e-40;2!UBERON:0000122;1.10e-40;2!UBERON:0002336;1.69e-21;1!UBERON:0011215;1.69e-21;1!UBERON:0001018;1.69e-21;1!UBERON:0002473;1.69e-21;1!UBERON:0005340;1.69e-21;1!UBERON:0003544;1.69e-21;1!UBERON:0005970;1.69e-21;1!UBERON:0002316;1.69e-21;1!UBERON:0001020;1.69e-21;1!UBERON:0002437;1.69e-21;1!UBERON:0002038;4.66e-21;1!UBERON:0000941;4.66e-21;1!UBERON:0001785;4.66e-21;1!UBERON:0002464;4.66e-21;1!UBERON:0004904;4.66e-21;1!UBERON:0001021;4.66e-21;1!UBERON:0009661;4.66e-21;1!UBERON:0002950;4.66e-21;1!UBERON:0001891;4.66e-21;1!UBERON:0009663;2.81e-12;7!UBERON:0001897;3.18e-11;2!UBERON:0001873;3.18e-11;2!UBERON:0003714;3.18e-11;2!UBERON:0010225;3.18e-11;2!UBERON:0002420;9.23e-10;9!UBERON:0000125;9.23e-10;9!UBERON:0007245;9.23e-10;9!UBERON:0002308;9.23e-10;9!UBERON:0010009;9.23e-10;9!UBERON:0010011;9.23e-10;9!UBERON:0000454;9.23e-10;9!UBERON:0005383;6.56e-08;3!UBERON:0005382;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,8.98e-41,2;UBERON:0000122,8.98e-41,2;UBERON:0002336,1.53e-21,1;UBERON:0011215,1.53e-21,1;UBERON:0001018,1.53e-21,1;UBERON:0002473,1.53e-21,1;UBERON:0005340,1.53e-21,1;UBERON:0003544,1.53e-21,1;UBERON:0005970,1.53e-21,1;UBERON:0002316,1.53e-21,1;UBERON:0001020,1.53e-21,1;UBERON:0002437,1.53e-21,1;UBERON:0000941,4.22e-21,1;UBERON:0001785,4.22e-21,1;UBERON:0002464,4.22e-21,1;UBERON:0004904,4.22e-21,1;UBERON:0001021,4.22e-21,1;UBERON:0003902,4.22e-21,1;UBERON:0005425,4.22e-21,1;UBERON:0002038,9.43e-21,1;UBERON:0009661,9.43e-21,1;UBERON:0002950,9.43e-21,1;UBERON:0001891,9.43e-21,1;UBERON:0009616,9.43e-21,1;UBERON:0010286,9.43e-21,1;UBERON:0009663,2.98e-12,7;UBERON:0001873,2.47e-11,2;UBERON:0010122,2.47e-11,2;UBERON:0001897,2.73e-11,2;UBERON:0010225,2.73e-11,2;UBERON:0003714,3.02e-11,2;UBERON:0002420,9.65e-10,9;UBERON:0000125,9.65e-10,9;UBERON:0007245,9.65e-10,9;UBERON:0002308,9.65e-10,9;UBERON:0010009,9.65e-10,9;UBERON:0010011,9.65e-10,9;UBERON:0000454,9.65e-10,9;UBERON:0003056,3.90e-08,61;UBERON:0005383,5.54e-08,3;UBERON:0005382,5.54e-08,3;UBERON:0002780,6.13e-08,41;UBERON:0001890,6.13e-08,41;UBERON:0003080,6.13e-08,41;UBERON:0006240,6.13e-08,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0.977766799900771,1.4203434172042,1.94826728407911,0.111410456885174,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,2.09071047609954,0,0,0,0,0.318565414324097,1.30216690771284,0,0.451725357233318,0.639933055772092,0,0.473554504088034,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89824871816911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.546746009922222,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.250381861413,0.573409195690071,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.41023272848151,0,0.691572524642179,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,0.263091094251396,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0.981542335574726,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,1.00337708206016,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.620597975171371,0,0,0,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0.977766799900771,1.4203434172042,1.94826728407911,0.111410456885174,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,2.09071047609954,0,0,0,0,0.318565414324097,1.30216690771284,0,0.451725357233318,0.639933055772092,0,0.473554504088034,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89824871816911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.546746009922222,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.250381861413,0.573409195690071,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.41023272848151,0,0.691572524642179,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,0.263091094251396,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0.981542335574726,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,1.00337708206016,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.620597975171371,0,0,0,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p31@ARHGEF1 | |short_description=p31@ARHGEF1 | ||
}} | }} |
Latest revision as of 07:08, 18 September 2015
Short description: | p31@ARHGEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_ARHGEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_AB590439, DQ893592, DQ895004, EU832644, EU832721_5end |
EntrezGene: | ARHGEF1 |
HGNC: | 681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data