FFCP PHASE1:Hg19::chr5:58335079..58335088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |UniProt=Q08499 | ||
|association_with_transcript=250bp_to_ENST00000358923,NM_001197221,NM_001197222,uc003jrt.2_5end | |association_with_transcript=250bp_to_ENST00000358923,NM_001197221,NM_001197222,uc003jrt.2_5end | ||
|cluster_id=chr5:58335079..58335088,- | |||
|coexpression_cluster_id=C2824 | |coexpression_cluster_id=C2824 | ||
|description=CAGE_peak_51_at_PDE4D_5end | |description=CAGE_peak_51_at_PDE4D_5end | ||
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|ontology_enrichment_celltype=CL:0000791!2.19e-08!18;CL:0000789!2.19e-08!18;CL:0002420!2.19e-08!18;CL:0002419!2.19e-08!18;CL:0000790!2.19e-08!18;CL:0000084!8.59e-08!25;CL:0000827!8.59e-08!25;CL:0000080!7.38e-07!6;CL:0000623!9.64e-07!3;CL:0000825!9.64e-07!3 | |ontology_enrichment_celltype=CL:0000791!2.19e-08!18;CL:0000789!2.19e-08!18;CL:0002420!2.19e-08!18;CL:0002419!2.19e-08!18;CL:0000790!2.19e-08!18;CL:0000084!8.59e-08!25;CL:0000827!8.59e-08!25;CL:0000080!7.38e-07!6;CL:0000623!9.64e-07!3;CL:0000825!9.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.70e-19;18!CL:0000789;8.70e-19;18!CL:0002419;8.70e-19;18!CL:0000624;5.16e-15;6!CL:0000767;1.32e-13;3!CL:0000623;1.32e-13;3!CL:0000084;2.03e-13;25!CL:0000094;3.00e-11;8!CL:0000895;7.81e-11;1!CL:0000625;1.97e-08;11!CL:0000081;2.54e-08;11 | |ontology_enrichment_celltype_v019=CL:0000791;8.70e-19;18!CL:0000789;8.70e-19;18!CL:0002419;8.70e-19;18!CL:0000624;5.16e-15;6!CL:0000767;1.32e-13;3!CL:0000623;1.32e-13;3!CL:0000084;2.03e-13;25!CL:0000094;3.00e-11;8!CL:0000895;7.81e-11;1!CL:0000625;1.97e-08;11!CL:0000081;2.54e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.97e-19,18;CL:0000789,4.97e-19,18;CL:0002420,4.97e-19,18;CL:0002419,4.97e-19,18;CL:0000790,4.97e-19,18;CL:0000624,2.85e-15,6;CL:0000623,8.44e-14,3;CL:0000825,8.44e-14,3;CL:0000084,1.37e-13,25;CL:0000827,1.37e-13,25;CL:0000767,1.60e-13,3;CL:0000094,3.41e-11,8;CL:0000810,5.05e-11,1;CL:0000895,5.05e-11,1;CL:0002436,5.05e-11,1;CL:0002427,5.05e-11,1;CL:0002428,5.05e-11,1;CL:0002429,5.05e-11,1;CL:0002433,5.05e-11,1;CL:0002431,5.05e-11,1;CL:0002432,5.05e-11,1;CL:0000838,6.09e-11,52;CL:0000542,1.02e-10,53;CL:0000051,1.02e-10,53;CL:0000625,1.72e-08,11;CL:0000081,2.78e-08,11;CL:0000738,3.67e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;8.70e-19;18!CL:0002427;7.81e-11;1 | |ontology_enrichment_development_v019=CL:0000790;8.70e-19;18!CL:0002427;7.81e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.52e-11;1!UBERON:0005208;2.52e-11;1!UBERON:0004145;2.52e-11;1!UBERON:0005946;2.52e-11;1!UBERON:0005965;2.52e-11;1!UBERON:0002078;2.52e-11;1!UBERON:0001389;7.81e-11;1!UBERON:0007195;7.81e-11;1!UBERON:0000026;7.81e-11;1!UBERON:0008784;7.81e-11;1!UBERON:0006058;7.81e-11;1!UBERON:0003663;7.81e-11;1!UBERON:0004256;7.81e-11;1!UBERON:0004708;7.81e-11;1!UBERON:0002101;7.81e-11;1!UBERON:0004709;7.81e-11;1!UBERON:0002529;7.81e-11;1!UBERON:0010538;7.81e-11;1!UBERON:0003661;7.81e-11;1!UBERON:0010890;7.81e-11;1!UBERON:0002471;7.81e-11;1!UBERON:0001383;7.81e-11;1!UBERON:0010758;7.81e-11;1!UBERON:0010707;7.81e-11;1!UBERON:0000978;7.81e-11;1!UBERON:0002103;7.81e-11;1!UBERON:0001665;7.81e-11;1!UBERON:0003823;7.81e-11;1!UBERON:0000154;7.81e-11;1!UBERON:0010709;7.81e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0002134;2.52e-11;1!UBERON:0005208;2.52e-11;1!UBERON:0004145;2.52e-11;1!UBERON:0005946;2.52e-11;1!UBERON:0005965;2.52e-11;1!UBERON:0002078;2.52e-11;1!UBERON:0001389;7.81e-11;1!UBERON:0007195;7.81e-11;1!UBERON:0000026;7.81e-11;1!UBERON:0008784;7.81e-11;1!UBERON:0006058;7.81e-11;1!UBERON:0003663;7.81e-11;1!UBERON:0004256;7.81e-11;1!UBERON:0004708;7.81e-11;1!UBERON:0002101;7.81e-11;1!UBERON:0004709;7.81e-11;1!UBERON:0002529;7.81e-11;1!UBERON:0010538;7.81e-11;1!UBERON:0003661;7.81e-11;1!UBERON:0010890;7.81e-11;1!UBERON:0002471;7.81e-11;1!UBERON:0001383;7.81e-11;1!UBERON:0010758;7.81e-11;1!UBERON:0010707;7.81e-11;1!UBERON:0000978;7.81e-11;1!UBERON:0002103;7.81e-11;1!UBERON:0001665;7.81e-11;1!UBERON:0003823;7.81e-11;1!UBERON:0000154;7.81e-11;1!UBERON:0010709;7.81e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.53e-11,1;UBERON:0005208,2.53e-11,1;UBERON:0005946,2.53e-11,1;UBERON:0005965,2.53e-11,1;UBERON:0002078,2.53e-11,1;UBERON:0005418,4.15e-11,1;UBERON:0001389,4.15e-11,1;UBERON:0000026,4.15e-11,1;UBERON:0008784,4.15e-11,1;UBERON:0006058,4.15e-11,1;UBERON:0003663,4.15e-11,1;UBERON:0004256,4.15e-11,1;UBERON:0004708,4.15e-11,1;UBERON:0002101,4.15e-11,1;UBERON:0004709,4.15e-11,1;UBERON:0002529,4.15e-11,1;UBERON:0010538,4.15e-11,1;UBERON:0003661,4.15e-11,1;UBERON:0010890,4.15e-11,1;UBERON:0002471,4.15e-11,1;UBERON:0001383,4.15e-11,1;UBERON:0004357,4.15e-11,1;UBERON:0004347,4.15e-11,1;UBERON:0005420,4.15e-11,1;UBERON:0005732,4.15e-11,1;UBERON:0010758,4.15e-11,1;UBERON:0010707,4.15e-11,1;UBERON:0000978,4.15e-11,1;UBERON:0002103,4.15e-11,1;UBERON:0001665,4.15e-11,1;UBERON:0003823,4.15e-11,1;UBERON:0000154,4.15e-11,1;UBERON:0010709,4.15e-11,1;UBERON:0005733,4.15e-11,1;UBERON:0005730,4.15e-11,1;UBERON:0007195,1.33e-10,1;UBERON:0002370,1.86e-10,4;UBERON:0005058,1.86e-10,4;UBERON:0009113,1.86e-10,4;UBERON:0003295,1.86e-10,4;UBERON:0005562,1.86e-10,4;UBERON:0003351,2.96e-07,6 | |||
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| ||
|short_description=p51@PDE4D | |short_description=p51@PDE4D | ||
}} | }} |
Latest revision as of 07:04, 18 September 2015
Short description: | p51@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_PDE4D_5end |
Coexpression cluster: | C2824_CD4_CD8_heart_skeletal_Natural_Basophils_Peripheral |
Association with transcript: | 250bp_to_ENST00000358923, NM_001197221, NM_001197222, uc003jrt.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.97e-19 | 18 |
alpha-beta T cell | 4.97e-19 | 18 |
immature T cell | 4.97e-19 | 18 |
mature T cell | 4.97e-19 | 18 |
immature alpha-beta T cell | 4.97e-19 | 18 |
CD4-positive, alpha-beta T cell | 2.85e-15 | 6 |
natural killer cell | 8.44e-14 | 3 |
pro-NK cell | 8.44e-14 | 3 |
T cell | 1.37e-13 | 25 |
pro-T cell | 1.37e-13 | 25 |
basophil | 1.60e-13 | 3 |
granulocyte | 3.41e-11 | 8 |
CD4-positive, alpha-beta thymocyte | 5.05e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.05e-11 | 1 |
mature CD4 single-positive thymocyte | 5.05e-11 | 1 |
resting double-positive thymocyte | 5.05e-11 | 1 |
double-positive blast | 5.05e-11 | 1 |
CD69-positive double-positive thymocyte | 5.05e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.05e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.05e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.05e-11 | 1 |
lymphoid lineage restricted progenitor cell | 6.09e-11 | 52 |
lymphocyte | 1.02e-10 | 53 |
common lymphoid progenitor | 1.02e-10 | 53 |
CD8-positive, alpha-beta T cell | 1.72e-08 | 11 |
blood cell | 2.78e-08 | 11 |
leukocyte | 3.67e-08 | 136 |