FFCP PHASE1:Hg19::chr21:36421237..36421252,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:36421237..36421252,-
|short_description=p33@RUNX1
|description=CAGE_peak_33_at_RUNX1_5end
|association_with_transcript=2bp_to_uc002yum.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=861 | |EntrezGene=861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10471 | |HGNC=10471 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc002yum.1_5end | |||
|cluster_id=chr21:36421237..36421252,- | |||
|description=CAGE_peak_33_at_RUNX1_5end | |||
|id=chr21:36421237..36421252,- | |||
|ontology_enrichment_celltype=CL:0000037!1.02e-27!172;CL:0000566!1.02e-27!172;CL:0000988!2.48e-26!182;CL:0002032!1.67e-23!165;CL:0000837!1.67e-23!165;CL:0000084!3.26e-23!25;CL:0000827!3.26e-23!25;CL:0000738!8.66e-23!140;CL:0000838!3.96e-21!52;CL:0000542!1.77e-20!53;CL:0000051!1.77e-20!53;CL:0000791!2.87e-19!18;CL:0000789!2.87e-19!18;CL:0002420!2.87e-19!18;CL:0002419!2.87e-19!18;CL:0000790!2.87e-19!18;CL:0002031!6.65e-19!124;CL:0002087!7.49e-18!119;CL:0000625!1.76e-11!11;CL:0000624!1.97e-08!6;CL:0000763!2.02e-07!112;CL:0000049!2.02e-07!112;CL:0002320!3.56e-07!365;CL:0000134!3.89e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.28e-57;18!CL:0000789;6.28e-57;18!CL:0002419;6.28e-57;18!CL:0000084;1.14e-45;25!CL:0000625;3.13e-34;11!CL:0000624;2.61e-28;6!CL:0000542;2.52e-18;53!CL:0000898;2.73e-15;3!CL:0000623;2.73e-15;3!CL:0000815;1.94e-10;2!CL:0000792;1.94e-10;2!CL:0002677;1.94e-10;2!CL:0000226;1.72e-07;3!CL:0000842;1.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.15e-57,18;CL:0000789,2.15e-57,18;CL:0002420,2.15e-57,18;CL:0002419,2.15e-57,18;CL:0000790,2.15e-57,18;CL:0000084,7.87e-46,25;CL:0000827,7.87e-46,25;CL:0000838,3.30e-36,52;CL:0000542,1.97e-35,53;CL:0000051,1.97e-35,53;CL:0000625,1.51e-34,11;CL:0000624,1.76e-28,6;CL:0000738,3.04e-23,136;CL:0000037,8.99e-21,168;CL:0000988,2.22e-19,177;CL:0002087,1.54e-18,115;CL:0002031,6.78e-16,120;CL:0000623,1.09e-15,3;CL:0000825,1.09e-15,3;CL:0000898,1.78e-15,3;CL:0002032,3.13e-14,161;CL:0000837,3.13e-14,161;CL:0000815,1.26e-10,2;CL:0000792,1.26e-10,2;CL:0002677,1.26e-10,2;CL:0000226,1.87e-07,3;CL:0000842,1.87e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.28e-57;18!CL:0000051;2.52e-18;53 | |||
|ontology_enrichment_disease=DOID:2531!8.41e-09!51;DOID:0060083!8.41e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-08!102;UBERON:0003061!1.89e-08!102;UBERON:0002384!2.07e-07!375;UBERON:0002193!3.13e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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87182052,0 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Latest revision as of 07:02, 18 September 2015
Short description: | p33@RUNX1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_RUNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_uc002yum.1_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.15e-57 | 18 |
alpha-beta T cell | 2.15e-57 | 18 |
immature T cell | 2.15e-57 | 18 |
mature T cell | 2.15e-57 | 18 |
immature alpha-beta T cell | 2.15e-57 | 18 |
T cell | 7.87e-46 | 25 |
pro-T cell | 7.87e-46 | 25 |
lymphoid lineage restricted progenitor cell | 3.30e-36 | 52 |
lymphocyte | 1.97e-35 | 53 |
common lymphoid progenitor | 1.97e-35 | 53 |
CD8-positive, alpha-beta T cell | 1.51e-34 | 11 |
CD4-positive, alpha-beta T cell | 1.76e-28 | 6 |
leukocyte | 3.04e-23 | 136 |
hematopoietic stem cell | 8.99e-21 | 168 |
hematopoietic cell | 2.22e-19 | 177 |
nongranular leukocyte | 1.54e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 6.78e-16 | 120 |
natural killer cell | 1.09e-15 | 3 |
pro-NK cell | 1.09e-15 | 3 |
naive T cell | 1.78e-15 | 3 |
hematopoietic oligopotent progenitor cell | 3.13e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.13e-14 | 161 |
regulatory T cell | 1.26e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.26e-10 | 2 |
naive regulatory T cell | 1.26e-10 | 2 |
single nucleate cell | 1.87e-07 | 3 |
mononuclear cell | 1.87e-07 | 3 |