FFCP PHASE1:Hg19::chr4:6784358..6784371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9778 | |EntrezGene=9778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28992 | |HGNC=28992 | ||
|TSSclassifier=strong | |||
|UniProt=D6REK0 | |UniProt=D6REK0 | ||
|association_with_transcript=0bp_to_ENST00000508423_5end | |association_with_transcript=0bp_to_ENST00000508423_5end | ||
|cluster_id=chr4:6784358..6784371,+ | |||
|description=CAGE_peak_3_at_KIAA0232_5end | |description=CAGE_peak_3_at_KIAA0232_5end | ||
|id=chr4:6784358..6784371,+ | |id=chr4:6784358..6784371,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.40e-17!42;CL:0000766!6.25e-17!76;CL:0000839!1.26e-15!70;CL:0000860!1.72e-15!45;CL:0000557!7.52e-15!71;CL:0002009!1.12e-13!65;CL:0000763!3.31e-13!112;CL:0000049!3.31e-13!112;CL:0000738!9.70e-13!140;CL:0002194!1.07e-12!63;CL:0000576!1.07e-12!63;CL:0000040!1.07e-12!63;CL:0000559!1.07e-12!63;CL:0002031!3.11e-11!124;CL:0000988!1.10e-10!182;CL:0000037!1.52e-10!172;CL:0000566!1.52e-10!172;CL:0002032!1.52e-10!165;CL:0000837!1.52e-10!165;CL:0002087!1.35e-08!119 | |ontology_enrichment_celltype=CL:0002057!4.40e-17!42;CL:0000766!6.25e-17!76;CL:0000839!1.26e-15!70;CL:0000860!1.72e-15!45;CL:0000557!7.52e-15!71;CL:0002009!1.12e-13!65;CL:0000763!3.31e-13!112;CL:0000049!3.31e-13!112;CL:0000738!9.70e-13!140;CL:0002194!1.07e-12!63;CL:0000576!1.07e-12!63;CL:0000040!1.07e-12!63;CL:0000559!1.07e-12!63;CL:0002031!3.11e-11!124;CL:0000988!1.10e-10!182;CL:0000037!1.52e-10!172;CL:0000566!1.52e-10!172;CL:0002032!1.52e-10!165;CL:0000837!1.52e-10!165;CL:0002087!1.35e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.31e-40;33!CL:0002057;2.31e-40;33!CL:0000473;7.41e-26;39!CL:0000234;7.41e-26;39!CL:0000576;5.40e-17;48!CL:0000766;6.89e-14;69!CL:0000763;6.68e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.56e-32,42;CL:0002057,5.56e-32,42;CL:0000766,2.53e-30,72;CL:0000839,4.48e-28,66;CL:0000557,3.70e-27,67;CL:0000473,8.51e-27,48;CL:0000234,8.51e-27,48;CL:0002009,5.25e-25,61;CL:0002194,1.36e-22,59;CL:0000576,1.36e-22,59;CL:0000040,1.36e-22,59;CL:0000559,1.36e-22,59;CL:0000763,1.43e-22,108;CL:0000049,1.43e-22,108;CL:0000738,8.29e-15,136;CL:0002031,3.43e-14,120;CL:0002032,2.00e-12,161;CL:0000837,2.00e-12,161;CL:0000037,4.46e-12,168;CL:0000988,1.31e-11,177;CL:0002087,9.71e-09,115;CL:0000775,7.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.39e-16!115;UBERON:0002390!1.03e-12!102;UBERON:0003061!1.03e-12!102;UBERON:0002193!4.21e-11!112;UBERON:0001474!5.04e-11!86;UBERON:0002371!7.49e-11!80;UBERON:0001049!3.48e-10!57;UBERON:0005068!3.48e-10!57;UBERON:0006241!3.48e-10!57;UBERON:0007135!3.48e-10!57;UBERON:0001017!1.11e-09!82;UBERON:0000955!1.85e-09!69;UBERON:0006238!1.85e-09!69;UBERON:0002405!3.13e-09!115;UBERON:0002616!3.19e-09!59;UBERON:0003080!2.22e-08!42;UBERON:0005743!2.55e-08!86;UBERON:0002780!5.98e-08!41;UBERON:0001890!5.98e-08!41;UBERON:0006240!5.98e-08!41;UBERON:0000073!9.41e-08!94;UBERON:0001016!9.41e-08!94;UBERON:0002020!1.43e-07!34;UBERON:0003528!1.43e-07!34;UBERON:0001893!1.56e-07!34;UBERON:0002791!3.73e-07!33;UBERON:0004765!5.39e-07!101;UBERON:0001434!5.39e-07!101 | |ontology_enrichment_uberon=UBERON:0007023!6.39e-16!115;UBERON:0002390!1.03e-12!102;UBERON:0003061!1.03e-12!102;UBERON:0002193!4.21e-11!112;UBERON:0001474!5.04e-11!86;UBERON:0002371!7.49e-11!80;UBERON:0001049!3.48e-10!57;UBERON:0005068!3.48e-10!57;UBERON:0006241!3.48e-10!57;UBERON:0007135!3.48e-10!57;UBERON:0001017!1.11e-09!82;UBERON:0000955!1.85e-09!69;UBERON:0006238!1.85e-09!69;UBERON:0002405!3.13e-09!115;UBERON:0002616!3.19e-09!59;UBERON:0003080!2.22e-08!42;UBERON:0005743!2.55e-08!86;UBERON:0002780!5.98e-08!41;UBERON:0001890!5.98e-08!41;UBERON:0006240!5.98e-08!41;UBERON:0000073!9.41e-08!94;UBERON:0001016!9.41e-08!94;UBERON:0002020!1.43e-07!34;UBERON:0003528!1.43e-07!34;UBERON:0001893!1.56e-07!34;UBERON:0002791!3.73e-07!33;UBERON:0004765!5.39e-07!101;UBERON:0001434!5.39e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;7.29e-07;6 | |||
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|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0.0764134057479513,0.328402357799783,0.393553906568396,0,0.767658796194425,0.309632246632152,0,0.90361775633475,0,0.0774672005803016,0,0,0.553995408531877,0.802177789880567,0.434021741431704,0.223915474239924,0,0,2.32637182047304,1.13362783106643,1.21292030593908,3.71886459049095,3.28934310417461,4.95530193432166,2.58923153089935,4.35473201099471,3.54723344832878,2.75796544589295,1.93645405075148,1.35426486594342,3.20011977222428,3.82068610080984,1.79778787556068,3.97909060082173,2.24650318953266,4.47535988059329,0.989553900560148,2.99195486432448,1.27867425159808,2.90209238628584,2.8369261234557,4.9825779919646,2.76373531782418,0.521482918420201,2.6062661364614,2.42159801053347,4.78760926783834,2.84816148696796,0.211255286311942,0,0.209658645508376,0.112328631146495,1.20141514273205,0.64290234678832,0.570025487482497,0,0.365328307529268,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,1.1384259382189,0,0.382273228125229,0,0,0.263384084775077,0.590129310341499,0,0.616804496998528,0.334372990781356,0.32592226663359,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0.25618263945135,0.520237390239513,0.164437904603676,0,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0.950452044448374,0.301150238155546,0,0,0,0.821127996921047,0.403213486449465,0,0.579297615531196,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0.283604451492204,0,0.351339142772504,0.785874452986276,0,0,1.29818957461873,0.522389211897802,1.06366368415092,0.476981248610684,0,1.11437250398869,0,0,0.347140501607594,0,0,0.275118041940067,0,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.535798369704479,0.22452937262617,0.337834441449967,0,0,0.732806975721629,7.9068250461638,11.6334079244498,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0.358779271377724,0.213557388818567,0,0.300091096084402,0.618315175430633,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.323292113637624,0.355009592516614,0.403008392910561,0.169560592310488,0,0.272746120590835,0.286804595389004,0.609868530647977,1.06023814657188,0.69716365721711,0.310983165046111,0.756962552626885,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0.674338760312407,0,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,0,0,0.590789906681404,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0.790204397959275,0,0.492434012174795,0.468008530278475,0.297262324577456,0,0,0.141775097242386,0.179117045405697,0,0,3.94130590316755,0.264145302039678,1.4512968087854,0.720599767084807,3.66103056936502,0.253991577168676,0.381988425558278,0,0,0.205654985406647,0,0.571652865261156,0.224262168690721,0,0.2933531432838,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.224170287987055,0.197030760201927,0.646882724578552,0.641715181398742,0,0,0,0.837581326671744,1.27587750330633,1.49801404789436,2.99161459204025,8.70272578215674,0.36807447515742,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,1.32845119707087,0,0.347534457872331,0.587403472388222,0.686286847621712,0.413536052245775,0.215714200818617,0.213455115606889,0.606255142892519,0,0,0.496215615637554,0.153461973288062,0,0.128139149255701,0,0,1.48418066444991,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0.368323955743585,0.34444334449382,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0,5.48149691614836,4.96727356947311,0,0,0,0.721287081534056,0.457847324091717,1.07262349896764,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0.356128142586949,0.165284915360978,0.384380134730212,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0.429374660225974,0,0.632758849437452,0.38126038784765,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0.443430153536676,0,0,0,1.70894156152249,1.42939065274673,2.46817363851717,1.29694662238543,2.16012574895246,1.58625035258854,0.427296284509893,0,0,0.743212700502875,0.28853842595289,0.640276590135727,0.3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| ||
|short_description=p3@KIAA0232 | |short_description=p3@KIAA0232 | ||
}} | }} |
Latest revision as of 06:50, 18 September 2015
Short description: | p3@KIAA0232 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIAA0232_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508423_5end |
EntrezGene: | KIAA0232 |
HGNC: | 28992 |
UniProt: | D6REK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.56e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.56e-32 | 42 |
myeloid leukocyte | 2.53e-30 | 72 |
myeloid lineage restricted progenitor cell | 4.48e-28 | 66 |
granulocyte monocyte progenitor cell | 3.70e-27 | 67 |
defensive cell | 8.51e-27 | 48 |
phagocyte | 8.51e-27 | 48 |
macrophage dendritic cell progenitor | 5.25e-25 | 61 |
monopoietic cell | 1.36e-22 | 59 |
monocyte | 1.36e-22 | 59 |
monoblast | 1.36e-22 | 59 |
promonocyte | 1.36e-22 | 59 |
myeloid cell | 1.43e-22 | 108 |
common myeloid progenitor | 1.43e-22 | 108 |
leukocyte | 8.29e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.43e-14 | 120 |
hematopoietic oligopotent progenitor cell | 2.00e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-12 | 161 |
hematopoietic stem cell | 4.46e-12 | 168 |
hematopoietic cell | 1.31e-11 | 177 |
nongranular leukocyte | 9.71e-09 | 115 |
neutrophil | 7.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.83e-25 | 98 |
blood island | 2.83e-25 | 98 |
bone marrow | 1.16e-22 | 76 |
hemolymphoid system | 9.88e-22 | 108 |
bone element | 1.82e-21 | 82 |
skeletal element | 1.36e-18 | 90 |
immune system | 1.10e-17 | 93 |
skeletal system | 1.13e-15 | 100 |
adult organism | 9.23e-11 | 114 |
lateral plate mesoderm | 6.17e-09 | 203 |
neural tube | 1.46e-07 | 56 |
neural rod | 1.46e-07 | 56 |
future spinal cord | 1.46e-07 | 56 |
neural keel | 1.46e-07 | 56 |