FFCP PHASE1:Hg19::chr1:16174280..16174365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23013 | |EntrezGene=23013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17575 | |HGNC=17575 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T58 | |UniProt=Q96T58 | ||
|association_with_transcript=0bp_to_ENST00000375759,NM_015001,uc001axk.1_5end | |association_with_transcript=0bp_to_ENST00000375759,NM_015001,uc001axk.1_5end | ||
|cluster_id=chr1:16174280..16174365,+ | |||
|coexpression_cluster_id=C612 | |coexpression_cluster_id=C612 | ||
|description=CAGE_peak_1_at_SPEN_5end | |description=CAGE_peak_1_at_SPEN_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.67e-34!172;CL:0000566!1.67e-34!172;CL:0002032!5.30e-32!165;CL:0000837!5.30e-32!165;CL:0000988!3.58e-30!182;CL:0000738!6.03e-29!140;CL:0000763!6.85e-23!112;CL:0000049!6.85e-23!112;CL:0002031!2.17e-21!124;CL:0002087!5.80e-19!119;CL:0000766!4.94e-16!76;CL:0000557!1.26e-13!71;CL:0000839!2.76e-12!70;CL:0002057!2.43e-11!42;CL:0002009!8.91e-11!65;CL:0000860!1.82e-10!45;CL:0002194!7.63e-10!63;CL:0000576!7.63e-10!63;CL:0000040!7.63e-10!63;CL:0000559!7.63e-10!63;CL:0000838!1.63e-08!52;CL:0000542!1.67e-08!53;CL:0000051!1.67e-08!53 | |ontology_enrichment_celltype=CL:0000037!1.67e-34!172;CL:0000566!1.67e-34!172;CL:0002032!5.30e-32!165;CL:0000837!5.30e-32!165;CL:0000988!3.58e-30!182;CL:0000738!6.03e-29!140;CL:0000763!6.85e-23!112;CL:0000049!6.85e-23!112;CL:0002031!2.17e-21!124;CL:0002087!5.80e-19!119;CL:0000766!4.94e-16!76;CL:0000557!1.26e-13!71;CL:0000839!2.76e-12!70;CL:0002057!2.43e-11!42;CL:0002009!8.91e-11!65;CL:0000860!1.82e-10!45;CL:0002194!7.63e-10!63;CL:0000576!7.63e-10!63;CL:0000040!7.63e-10!63;CL:0000559!7.63e-10!63;CL:0000838!1.63e-08!52;CL:0000542!1.67e-08!53;CL:0000051!1.67e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-08;33!CL:0002057;1.45e-08;33!CL:0000576;5.53e-08;48!CL:0000766;6.30e-08;69!CL:0000738;7.63e-07;136!CL:0000763;9.84e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;1.45e-08;33!CL:0002057;1.45e-08;33!CL:0000576;5.53e-08;48!CL:0000766;6.30e-08;69!CL:0000738;7.63e-07;136!CL:0000763;9.84e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.81e-35,168;CL:0002032,6.03e-33,161;CL:0000837,6.03e-33,161;CL:0000988,1.40e-31,177;CL:0000738,5.78e-30,136;CL:0000763,6.42e-24,108;CL:0000049,6.42e-24,108;CL:0002031,2.86e-22,120;CL:0002087,8.72e-20,115;CL:0000766,4.18e-17,72;CL:0000557,1.31e-14,67;CL:0000839,3.44e-13,66;CL:0002009,1.24e-11,61;CL:0000860,2.43e-11,42;CL:0002057,2.43e-11,42;CL:0002194,1.19e-10,59;CL:0000576,1.19e-10,59;CL:0000040,1.19e-10,59;CL:0000559,1.19e-10,59;CL:0000473,6.74e-10,48;CL:0000234,6.74e-10,48;CL:0000838,1.63e-08,52;CL:0000542,1.67e-08,53;CL:0000051,1.67e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-08;42!CL:0000049;3.44e-07;108 | |ontology_enrichment_development_v019=CL:0002057;1.24e-08;42!CL:0000049;3.44e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-27!115;UBERON:0002390!1.59e-14!102;UBERON:0003061!1.59e-14!102;UBERON:0001049!4.94e-14!57;UBERON:0005068!4.94e-14!57;UBERON:0006241!4.94e-14!57;UBERON:0007135!4.94e-14!57;UBERON:0002193!1.77e-12!112;UBERON:0003080!5.69e-12!42;UBERON:0002780!1.30e-11!41;UBERON:0001890!1.30e-11!41;UBERON:0006240!1.30e-11!41;UBERON:0002616!5.27e-11!59;UBERON:0001017!5.32e-11!82;UBERON:0001474!8.22e-11!86;UBERON:0000955!1.97e-10!69;UBERON:0006238!1.97e-10!69;UBERON:0005743!4.36e-10!86;UBERON:0002371!6.13e-10!80;UBERON:0001893!6.84e-10!34;UBERON:0002020!7.25e-10!34;UBERON:0003528!7.25e-10!34;UBERON:0002791!1.25e-09!33;UBERON:0000073!2.99e-09!94;UBERON:0001016!2.99e-09!94;UBERON:0001869!7.10e-09!32;UBERON:0002346!2.40e-08!90;UBERON:0003075!4.20e-08!86;UBERON:0007284!4.20e-08!86;UBERON:0002405!1.21e-07!115;UBERON:0002619!3.49e-07!22;UBERON:0004765!5.28e-07!101;UBERON:0001434!5.28e-07!101;UBERON:0001950!5.29e-07!20;UBERON:0000956!7.22e-07!25;UBERON:0000203!7.22e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!1.34e-27!115;UBERON:0002390!1.59e-14!102;UBERON:0003061!1.59e-14!102;UBERON:0001049!4.94e-14!57;UBERON:0005068!4.94e-14!57;UBERON:0006241!4.94e-14!57;UBERON:0007135!4.94e-14!57;UBERON:0002193!1.77e-12!112;UBERON:0003080!5.69e-12!42;UBERON:0002780!1.30e-11!41;UBERON:0001890!1.30e-11!41;UBERON:0006240!1.30e-11!41;UBERON:0002616!5.27e-11!59;UBERON:0001017!5.32e-11!82;UBERON:0001474!8.22e-11!86;UBERON:0000955!1.97e-10!69;UBERON:0006238!1.97e-10!69;UBERON:0005743!4.36e-10!86;UBERON:0002371!6.13e-10!80;UBERON:0001893!6.84e-10!34;UBERON:0002020!7.25e-10!34;UBERON:0003528!7.25e-10!34;UBERON:0002791!1.25e-09!33;UBERON:0000073!2.99e-09!94;UBERON:0001016!2.99e-09!94;UBERON:0001869!7.10e-09!32;UBERON:0002346!2.40e-08!90;UBERON:0003075!4.20e-08!86;UBERON:0007284!4.20e-08!86;UBERON:0002405!1.21e-07!115;UBERON:0002619!3.49e-07!22;UBERON:0004765!5.28e-07!101;UBERON:0001434!5.28e-07!101;UBERON:0001950!5.29e-07!20;UBERON:0000956!7.22e-07!25;UBERON:0000203!7.22e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.87e-09;41!UBERON:0001890;4.87e-09;41!UBERON:0000073;1.75e-08;53!UBERON:0002616;1.75e-08;53!UBERON:0001893;2.02e-08;34!UBERON:0003528;2.29e-08;34!UBERON:0002020;2.29e-08;34!UBERON:0002791;3.16e-08;32!UBERON:0007023;5.07e-08;114!UBERON:0001869;5.66e-08;32!UBERON:0002619;3.63e-07;22!UBERON:0001950;5.68e-07;20!UBERON:0000956;7.86e-07;25!UBERON:0000203;7.86e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002780;4.87e-09;41!UBERON:0001890;4.87e-09;41!UBERON:0000073;1.75e-08;53!UBERON:0002616;1.75e-08;53!UBERON:0001893;2.02e-08;34!UBERON:0003528;2.29e-08;34!UBERON:0002020;2.29e-08;34!UBERON:0002791;3.16e-08;32!UBERON:0007023;5.07e-08;114!UBERON:0001869;5.66e-08;32!UBERON:0002619;3.63e-07;22!UBERON:0001950;5.68e-07;20!UBERON:0000956;7.86e-07;25!UBERON:0000203;7.86e-07;25 | ||
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| ||
|short_description=p1@SPEN | |short_description=p1@SPEN | ||
}} | }} |
Latest revision as of 06:48, 18 September 2015
Short description: | p1@SPEN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPEN_5end |
Coexpression cluster: | C612_Neutrophils_Eosinophils_granulocyte_CD14_CD4_acute_CD19 |
Association with transcript: | 0bp_to_ENST00000375759, NM_015001, uc001axk.1_5end |
EntrezGene: | SPEN |
HGNC: | 17575 |
UniProt: | Q96T58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.81e-35 | 168 |
hematopoietic oligopotent progenitor cell | 6.03e-33 | 161 |
hematopoietic multipotent progenitor cell | 6.03e-33 | 161 |
hematopoietic cell | 1.40e-31 | 177 |
leukocyte | 5.78e-30 | 136 |
myeloid cell | 6.42e-24 | 108 |
common myeloid progenitor | 6.42e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 2.86e-22 | 120 |
nongranular leukocyte | 8.72e-20 | 115 |
myeloid leukocyte | 4.18e-17 | 72 |
granulocyte monocyte progenitor cell | 1.31e-14 | 67 |
myeloid lineage restricted progenitor cell | 3.44e-13 | 66 |
macrophage dendritic cell progenitor | 1.24e-11 | 61 |
classical monocyte | 2.43e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-11 | 42 |
monopoietic cell | 1.19e-10 | 59 |
monocyte | 1.19e-10 | 59 |
monoblast | 1.19e-10 | 59 |
promonocyte | 1.19e-10 | 59 |
defensive cell | 6.74e-10 | 48 |
phagocyte | 6.74e-10 | 48 |
lymphoid lineage restricted progenitor cell | 1.63e-08 | 52 |
lymphocyte | 1.67e-08 | 53 |
common lymphoid progenitor | 1.67e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.61e-27 | 114 |
hematopoietic system | 2.84e-15 | 98 |
blood island | 2.84e-15 | 98 |
neural tube | 1.13e-13 | 56 |
neural rod | 1.13e-13 | 56 |
future spinal cord | 1.13e-13 | 56 |
neural keel | 1.13e-13 | 56 |
hemolymphoid system | 4.44e-13 | 108 |
regional part of nervous system | 5.14e-13 | 53 |
regional part of brain | 5.14e-13 | 53 |
regional part of forebrain | 1.30e-11 | 41 |
forebrain | 1.30e-11 | 41 |
anterior neural tube | 1.30e-11 | 41 |
future forebrain | 1.30e-11 | 41 |
bone element | 1.77e-11 | 82 |
central nervous system | 1.08e-10 | 81 |
bone marrow | 1.34e-10 | 76 |
brain | 4.07e-10 | 68 |
future brain | 4.07e-10 | 68 |
telencephalon | 6.84e-10 | 34 |
brain grey matter | 7.25e-10 | 34 |
gray matter | 7.25e-10 | 34 |
immune system | 8.41e-10 | 93 |
nervous system | 9.42e-10 | 89 |
regional part of telencephalon | 3.92e-09 | 32 |
cerebral hemisphere | 7.10e-09 | 32 |
skeletal element | 3.08e-08 | 90 |
neurectoderm | 8.60e-08 | 86 |
neural plate | 1.50e-07 | 82 |
presumptive neural plate | 1.50e-07 | 82 |
regional part of cerebral cortex | 3.49e-07 | 22 |
neocortex | 5.29e-07 | 20 |
cerebral cortex | 7.22e-07 | 25 |
pallium | 7.22e-07 | 25 |