FFCP PHASE1:Hg19::chr12:40618331..40618360,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=120892 | |EntrezGene=120892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18618 | |HGNC=18618 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC85,Q17RV3,Q5S007 | |UniProt=E9PC85,Q17RV3,Q5S007 | ||
|association_with_transcript=-452bp_to_ENST00000343742,NM_198578,uc001rmg.3_5end | |association_with_transcript=-452bp_to_ENST00000343742,NM_198578,uc001rmg.3_5end | ||
|cluster_id=chr12:40618331..40618360,+ | |||
|description=CAGE_peak_5_at_LRRK2_5end | |description=CAGE_peak_5_at_LRRK2_5end | ||
|id=chr12:40618331..40618360,+ | |id=chr12:40618331..40618360,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.00e-12;2!UBERON:0006601;1.20e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-38!115;UBERON:0002780!1.65e-24!41;UBERON:0001890!1.65e-24!41;UBERON:0006240!1.65e-24!41;UBERON:0003080!1.29e-23!42;UBERON:0001049!1.67e-23!57;UBERON:0005068!1.67e-23!57;UBERON:0006241!1.67e-23!57;UBERON:0007135!1.67e-23!57;UBERON:0001893!1.87e-22!34;UBERON:0002791!1.94e-21!33;UBERON:0001869!1.97e-21!32;UBERON:0002616!1.40e-20!59;UBERON:0002020!2.16e-20!34;UBERON:0003528!2.16e-20!34;UBERON:0003075!3.46e-19!86;UBERON:0007284!3.46e-19!86;UBERON:0005743!4.02e-19!86;UBERON:0000955!4.49e-19!69;UBERON:0006238!4.49e-19!69;UBERON:0001017!1.02e-18!82;UBERON:0002346!1.51e-17!90;UBERON:0001950!2.60e-17!20;UBERON:0000073!2.86e-17!94;UBERON:0001016!2.86e-17!94;UBERON:0002619!4.53e-17!22;UBERON:0000956!1.08e-16!25;UBERON:0000203!1.08e-16!25;UBERON:0000033!1.35e-15!123;UBERON:0000153!1.48e-15!129;UBERON:0007811!1.48e-15!129;UBERON:0003056!2.95e-15!61;UBERON:0004121!2.03e-13!169;UBERON:0000924!1.31e-12!173;UBERON:0006601!1.31e-12!173;UBERON:0000062!2.92e-12!511;UBERON:0000468!1.24e-11!659;UBERON:0000467!1.37e-11!625;UBERON:0000480!1.74e-11!626;UBERON:0002050!1.32e-10!605;UBERON:0005423!1.32e-10!605;UBERON:0000922!2.18e-10!612;UBERON:0000923!3.46e-10!604;UBERON:0005291!3.46e-10!604;UBERON:0006598!3.46e-10!604;UBERON:0002532!3.46e-10!604;UBERON:0000475!5.20e-08!365;UBERON:0000200!1.57e-07!6;UBERON:0002420!2.92e-07!9;UBERON:0007245!2.92e-07!9;UBERON:0010009!2.92e-07!9;UBERON:0010011!2.92e-07!9;UBERON:0000454!2.92e-07!9;UBERON:0004111!4.18e-07!241;UBERON:0002021!9.65e-07!5 | |ontology_enrichment_uberon=UBERON:0007023!1.08e-38!115;UBERON:0002780!1.65e-24!41;UBERON:0001890!1.65e-24!41;UBERON:0006240!1.65e-24!41;UBERON:0003080!1.29e-23!42;UBERON:0001049!1.67e-23!57;UBERON:0005068!1.67e-23!57;UBERON:0006241!1.67e-23!57;UBERON:0007135!1.67e-23!57;UBERON:0001893!1.87e-22!34;UBERON:0002791!1.94e-21!33;UBERON:0001869!1.97e-21!32;UBERON:0002616!1.40e-20!59;UBERON:0002020!2.16e-20!34;UBERON:0003528!2.16e-20!34;UBERON:0003075!3.46e-19!86;UBERON:0007284!3.46e-19!86;UBERON:0005743!4.02e-19!86;UBERON:0000955!4.49e-19!69;UBERON:0006238!4.49e-19!69;UBERON:0001017!1.02e-18!82;UBERON:0002346!1.51e-17!90;UBERON:0001950!2.60e-17!20;UBERON:0000073!2.86e-17!94;UBERON:0001016!2.86e-17!94;UBERON:0002619!4.53e-17!22;UBERON:0000956!1.08e-16!25;UBERON:0000203!1.08e-16!25;UBERON:0000033!1.35e-15!123;UBERON:0000153!1.48e-15!129;UBERON:0007811!1.48e-15!129;UBERON:0003056!2.95e-15!61;UBERON:0004121!2.03e-13!169;UBERON:0000924!1.31e-12!173;UBERON:0006601!1.31e-12!173;UBERON:0000062!2.92e-12!511;UBERON:0000468!1.24e-11!659;UBERON:0000467!1.37e-11!625;UBERON:0000480!1.74e-11!626;UBERON:0002050!1.32e-10!605;UBERON:0005423!1.32e-10!605;UBERON:0000922!2.18e-10!612;UBERON:0000923!3.46e-10!604;UBERON:0005291!3.46e-10!604;UBERON:0006598!3.46e-10!604;UBERON:0002532!3.46e-10!604;UBERON:0000475!5.20e-08!365;UBERON:0000200!1.57e-07!6;UBERON:0002420!2.92e-07!9;UBERON:0007245!2.92e-07!9;UBERON:0010009!2.92e-07!9;UBERON:0010011!2.92e-07!9;UBERON:0000454!2.92e-07!9;UBERON:0004111!4.18e-07!241;UBERON:0002021!9.65e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.94e-35;32!UBERON:0001893;8.59e-34;34!UBERON:0002791;2.77e-32;32!UBERON:0001950;3.74e-30;20!UBERON:0003528;1.85e-28;34!UBERON:0002020;1.85e-28;34!UBERON:0002619;2.41e-27;22!UBERON:0000956;6.10e-24;25!UBERON:0000203;6.10e-24;25!UBERON:0002780;8.62e-23;41!UBERON:0001890;8.62e-23;41!UBERON:0000369;8.74e-22;4!UBERON:0002435;8.74e-22;4!UBERON:0000204;8.74e-22;4!UBERON:0002021;1.51e-18;5!UBERON:0005383;8.74e-17;3!UBERON:0005382;8.74e-17;3!UBERON:0000073;1.42e-15;53!UBERON:0002616;1.42e-15;53!UBERON:0000200;1.37e-14;6!UBERON:0007023;3.24e-14;114!UBERON:0000955;2.99e-13;68!UBERON:0001017;1.18e-12;75!UBERON:0009663;1.58e-12;7!UBERON:0001873;9.00e-12;2!UBERON:0002420;8.99e-10;9!UBERON:0000125;8.99e-10;9!UBERON:0007245;8.99e-10;9!UBERON:0002308;8.99e-10;9!UBERON:0010009;8.99e-10;9!UBERON:0010011;8.99e-10;9!UBERON:0000454;8.99e-10;9!UBERON:0001016;1.09e-08;83!UBERON:0001870;2.07e-08;3!UBERON:0002902;3.82e-07;1!UBERON:0002022;3.82e-07;1!UBERON:0002171;3.82e-07;1!UBERON:0006518;3.82e-07;1!UBERON:0008949;3.82e-07;1!UBERON:0009899;3.82e-07;1!UBERON:0000101;3.82e-07;1!UBERON:0002167;3.82e-07;1 | |||
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|phase1_expression=0,0.214100523890983,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,1.1507695692886,0.768482119587302,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,1.31940520074686,1.19678194572979,0.852449501065388,0.290209238628584,0,0,1.25624332628372,0,0.868755378820466,0,0,0,0.211255286311942,0,0,0.336985893439485,0.450530678524519,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0.600952235626387,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0,0,0,0,1.24324654030811,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0.306923946576125,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0.409074730008619,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,1.48428957058962,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.08536794762867,0,0.774054819518572,1.47773809476774,1.97446857438575,0,0.139423744278603,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,1.1713222286267,0,0,0,0,0,0,0.31593289814244,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0.176512253383001,0,0,0,2.089256266544,0,0,0.85381197895741,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,1.78537165953498,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.899895566206002,0,2.49073182297901,0,0.472834243795189,0.786818822024972,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,1.19760786519031,0,0.747511887973863,0.78602152549833,2.48543433208317,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0.157054096250234,1.77213635993397,1.70836770862748,0.876336514945499,0,0,0.434674820589684,0,0,0.151649117541648,0.285465333544967,0,0,0.144921028610825,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0.352675943690684,0.3062454773532,1.15612605173627,2.8339315265117,1.11743701340006,3.28186182785208,0.504143392443436,2.42050383624763,1.13032951942296,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0,0,0,0,1.41828927698629,0.781078098613847,0.620060389503552,2.7902956485319,0.546974809018219,0,1.98484471355718,0,0,0,0.336283722218824,0.606965604236632,0.91064876540519,0,0,0,0.135939465953663,1.51277379194553,0,0,0.549451649953598,1.09980912941201,0,0.913158720509496,0.431855182437243,0,1.07214816264985,0,0,0,0.801711364730253,0.207216164163037,0.3414369541879,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,1.29485767437579,3.07988420568741,0,0,0,0,0,0.11294608203896,0,0,0,0.655678681511872,0,1.22574160876953,0,0.392616934229891,0,0.8453114551668,0.169927114687817,0.375935671919414,0.0644578879735772,0,0.178553938605658,0.35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|phase1_expression=0,0.214100523890983,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,1.1507695692886,0.768482119587302,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,1.31940520074686,1.19678194572979,0.852449501065388,0.290209238628584,0,0,1.25624332628372,0,0.868755378820466,0,0,0,0.211255286311942,0,0,0.336985893439485,0.450530678524519,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0.600952235626387,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0,0,0,0,1.24324654030811,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0.306923946576125,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0.409074730008619,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,1.48428957058962,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.08536794762867,0,0.774054819518572,1.47773809476774,1.97446857438575,0,0.139423744278603,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,1.1713222286267,0,0,0,0,0,0,0.31593289814244,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0.176512253383001,0,0,0,2.089256266544,0,0,0.85381197895741,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,1.78537165953498,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.899895566206002,0,2.49073182297901,0,0.472834243795189,0.786818822024972,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,1.19760786519031,0,0.747511887973863,0.78602152549833,2.48543433208317,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0.157054096250234,1.77213635993397,1.70836770862748,0.876336514945499,0,0,0.434674820589684,0,0,0.151649117541648,0.285465333544967,0,0,0.144921028610825,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0.352675943690684,0.3062454773532,1.15612605173627,2.8339315265117,1.11743701340006,3.28186182785208,0.504143392443436,2.42050383624763,1.13032951942296,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0,0,0,0,1.41828927698629,0.781078098613847,0.620060389503552,2.7902956485319,0.546974809018219,0,1.98484471355718,0,0,0,0.336283722218824,0.606965604236632,0.91064876540519,0,0,0,0.135939465953663,1.51277379194553,0,0,0.549451649953598,1.09980912941201,0,0.913158720509496,0.431855182437243,0,1.07214816264985,0,0,0,0.801711364730253,0.207216164163037,0.3414369541879,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,1.29485767437579,3.07988420568741,0,0,0,0,0,0.11294608203896,0,0,0,0.655678681511872,0,1.22574160876953,0,0.392616934229891,0,0.8453114551668,0.169927114687817,0.375935671919414,0.0644578879735772,0,0.178553938605658,0.35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| ||
|short_description=p5@LRRK2 | |short_description=p5@LRRK2 | ||
}} | }} |
Latest revision as of 06:43, 18 September 2015
Short description: | p5@LRRK2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -452bp_to_ENST00000343742, NM_198578, uc001rmg.3_5end |
EntrezGene: | LRRK2 |
HGNC: | 18618 |
UniProt: | E9PC85Q17RV3Q5S007 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data