FFCP PHASE1:Hg19::chr1:161736102..161736123,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22926 | |EntrezGene=22926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=791 | |HGNC=791 | ||
|TSSclassifier=strong | |||
|UniProt=P18850,Q59H30 | |UniProt=P18850,Q59H30 | ||
|association_with_transcript=18bp_to_ENST00000367942,uc001gbq.1,uc001gbr.2_5end | |association_with_transcript=18bp_to_ENST00000367942,uc001gbq.1,uc001gbr.2_5end | ||
|cluster_id=chr1:161736102..161736123,+ | |||
|description=CAGE_peak_1_at_ATF6_5end | |description=CAGE_peak_1_at_ATF6_5end | ||
|id=chr1:161736102..161736123,+ | |id=chr1:161736102..161736123,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.97e-11!76;CL:0002009!1.44e-10!65;CL:0000557!1.48e-10!71;CL:0000839!1.56e-10!70;CL:0000860!8.08e-10!45;CL:0002194!1.05e-09!63;CL:0000576!1.05e-09!63;CL:0000040!1.05e-09!63;CL:0000559!1.05e-09!63;CL:0002057!3.69e-09!42;CL:0002139!2.60e-08!24;CL:0000763!1.59e-07!112;CL:0000049!1.59e-07!112 | |ontology_enrichment_celltype=CL:0000766!1.97e-11!76;CL:0002009!1.44e-10!65;CL:0000557!1.48e-10!71;CL:0000839!1.56e-10!70;CL:0000860!8.08e-10!45;CL:0002194!1.05e-09!63;CL:0000576!1.05e-09!63;CL:0000040!1.05e-09!63;CL:0000559!1.05e-09!63;CL:0002057!3.69e-09!42;CL:0002139!2.60e-08!24;CL:0000763!1.59e-07!112;CL:0000049!1.59e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.27e-11;33!CL:0002057;4.27e-11;33!CL:0000473;4.29e-10;39!CL:0000234;4.29e-10;39!CL:0002139;2.82e-08;24!CL:0000576;3.29e-07;48 | |ontology_enrichment_celltype_v019=CL:0000860;4.27e-11;33!CL:0002057;4.27e-11;33!CL:0000473;4.29e-10;39!CL:0000234;4.29e-10;39!CL:0002139;2.82e-08;24!CL:0000576;3.29e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.43e-11,72;CL:0002009,3.83e-10,61;CL:0000557,4.02e-10,67;CL:0000839,4.23e-10,66;CL:0000473,5.12e-10,48;CL:0000234,5.12e-10,48;CL:0002194,2.80e-09,59;CL:0000576,2.80e-09,59;CL:0000040,2.80e-09,59;CL:0000559,2.80e-09,59;CL:0000860,3.69e-09,42;CL:0002057,3.69e-09,42;CL:0002139,2.60e-08,24;CL:0000763,4.11e-07,108;CL:0000049,4.11e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;8.79e-07;42 | |ontology_enrichment_development_v019=CL:0002057;8.79e-07;42 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.18e-10!112;UBERON:0002390!1.01e-08!102;UBERON:0003061!1.01e-08!102;UBERON:0001474!1.89e-08!86;UBERON:0002371!4.15e-08!80;UBERON:0002405!4.97e-07!115 | |ontology_enrichment_uberon=UBERON:0002193!5.18e-10!112;UBERON:0002390!1.01e-08!102;UBERON:0003061!1.01e-08!102;UBERON:0001474!1.89e-08!86;UBERON:0002371!4.15e-08!80;UBERON:0002405!4.97e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.46e-09,108;UBERON:0002405,3.49e-09,93;UBERON:0002390,2.76e-08,98;UBERON:0003061,2.76e-08,98;UBERON:0001474,5.15e-08,82;UBERON:0002371,1.12e-07,76 | |||
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59689231 | ||
|short_description=p1@ATF6 | |short_description=p1@ATF6 | ||
}} | }} |
Latest revision as of 06:41, 18 September 2015
Short description: | p1@ATF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000367942, uc001gbq.1, uc001gbr.2_5end |
EntrezGene: | ATF6 |
HGNC: | 791 |
UniProt: | P18850Q59H30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.43e-11 | 72 |
macrophage dendritic cell progenitor | 3.83e-10 | 61 |
granulocyte monocyte progenitor cell | 4.02e-10 | 67 |
myeloid lineage restricted progenitor cell | 4.23e-10 | 66 |
defensive cell | 5.12e-10 | 48 |
phagocyte | 5.12e-10 | 48 |
monopoietic cell | 2.80e-09 | 59 |
monocyte | 2.80e-09 | 59 |
monoblast | 2.80e-09 | 59 |
promonocyte | 2.80e-09 | 59 |
classical monocyte | 3.69e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-09 | 42 |
endothelial cell of vascular tree | 2.60e-08 | 24 |
myeloid cell | 4.11e-07 | 108 |
common myeloid progenitor | 4.11e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.46e-09 | 108 |
immune system | 3.49e-09 | 93 |
hematopoietic system | 2.76e-08 | 98 |
blood island | 2.76e-08 | 98 |
bone element | 5.15e-08 | 82 |
bone marrow | 1.12e-07 | 76 |