FFCP PHASE1:Hg19::chr6:33267130..33267170,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:33267130..33267170,-
|short_description=p6@RGL2
|description=CAGE_peak_6_at_RGL2_5end
|association_with_transcript=0bp_to_NM_001243738,NM_004761_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5863 | |EntrezGene=5863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9769 | |HGNC=9769 | ||
|TSSclassifier=strong | |||
|UniProt=O15211 | |UniProt=O15211 | ||
|association_with_transcript=0bp_to_NM_001243738,NM_004761_5end | |||
|cluster_id=chr6:33267130..33267170,- | |||
|description=CAGE_peak_6_at_RGL2_5end | |||
|id=chr6:33267130..33267170,- | |||
|ontology_enrichment_celltype=CL:0000860!1.54e-10!45;CL:0002057!2.68e-10!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.25e-14;33!CL:0002057;8.25e-14;33!CL:0000473;1.17e-08;39!CL:0000234;1.17e-08;39!CL:0000576;8.07e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.58e-13,42;CL:0002057,3.58e-13,42;CL:0000473,5.62e-10,48;CL:0000234,5.62e-10,48;CL:0000766,3.45e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;3.31e-10;42 | |||
|ontology_enrichment_disease=DOID:0050687!4.17e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.04e-19!86;UBERON:0000073!2.08e-19!94;UBERON:0001016!2.08e-19!94;UBERON:0001017!4.06e-19!82;UBERON:0001049!1.07e-17!57;UBERON:0005068!1.07e-17!57;UBERON:0006241!1.07e-17!57;UBERON:0007135!1.07e-17!57;UBERON:0000955!2.91e-16!69;UBERON:0006238!2.91e-16!69;UBERON:0002346!7.34e-15!90;UBERON:0002616!1.48e-14!59;UBERON:0003075!5.24e-14!86;UBERON:0007284!5.24e-14!86;UBERON:0002780!5.19e-13!41;UBERON:0001890!5.19e-13!41;UBERON:0006240!5.19e-13!41;UBERON:0003080!7.64e-13!42;UBERON:0003056!9.81e-12!61;UBERON:0007023!1.58e-10!115;UBERON:0000924!4.38e-10!173;UBERON:0006601!4.38e-10!173;UBERON:0002020!5.71e-10!34;UBERON:0003528!5.71e-10!34;UBERON:0001893!6.01e-10!34;UBERON:0002791!8.92e-10!33;UBERON:0000153!1.24e-09!129;UBERON:0007811!1.24e-09!129;UBERON:0004121!2.11e-09!169;UBERON:0001869!4.90e-09!32;UBERON:0000033!7.66e-09!123;UBERON:0000062!5.75e-07!511;UBERON:0002619!8.25e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.24e-12;53!UBERON:0002616;2.24e-12;53!UBERON:0002780;1.16e-10;41!UBERON:0001890;1.16e-10;41!UBERON:0003528;1.33e-09;34!UBERON:0002020;1.33e-09;34!UBERON:0001893;1.41e-09;34!UBERON:0000955;3.11e-09;68!UBERON:0001017;5.66e-09;75!UBERON:0002791;6.09e-09;32!UBERON:0001869;1.22e-08;32!UBERON:0001016;1.78e-08;83!UBERON:0002619;3.18e-07;22!UBERON:0001950;3.29e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.90e-23,81;UBERON:0001016,1.30e-22,89;UBERON:0001049,9.16e-22,56;UBERON:0005068,9.16e-22,56;UBERON:0006241,9.16e-22,56;UBERON:0007135,9.16e-22,56;UBERON:0000073,1.85e-20,53;UBERON:0002616,1.85e-20,53;UBERON:0000955,1.45e-19,68;UBERON:0006238,1.45e-19,68;UBERON:0002346,2.55e-18,86;UBERON:0003075,3.47e-17,82;UBERON:0007284,3.47e-17,82;UBERON:0002780,1.17e-15,41;UBERON:0001890,1.17e-15,41;UBERON:0003080,1.17e-15,41;UBERON:0006240,1.17e-15,41;UBERON:0003056,2.06e-14,61;UBERON:0010371,3.62e-12,104;UBERON:0003528,1.15e-11,34;UBERON:0002020,1.15e-11,34;UBERON:0001893,1.23e-11,34;UBERON:0004121,4.63e-11,171;UBERON:0000924,4.63e-11,171;UBERON:0006601,4.63e-11,171;UBERON:0002791,7.47e-11,32;UBERON:0001869,1.89e-10,32;UBERON:0007023,2.60e-09,114;UBERON:0010314,1.17e-08,132;UBERON:0001950,6.45e-08,20;UBERON:0002619,6.83e-08,22;UBERON:0011216,1.04e-07,223;UBERON:0003076,2.26e-07,15;UBERON:0003057,2.26e-07,15;UBERON:0000956,3.63e-07,25;UBERON:0000203,3.63e-07,25;UBERON:0002420,9.19e-07,9;UBERON:0007245,9.19e-07,9;UBERON:0010009,9.19e-07,9;UBERON:0010011,9.19e-07,9;UBERON:0000454,9.19e-07,9 | |||
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| ||
|short_description=p6@RGL2 | |||
}} | }} |
Latest revision as of 06:41, 18 September 2015
Short description: | p6@RGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RGL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001243738, NM_004761_5end |
EntrezGene: | RGL2 |
HGNC: | 9769 |
UniProt: | O15211 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.58e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.58e-13 | 42 |
defensive cell | 5.62e-10 | 48 |
phagocyte | 5.62e-10 | 48 |
myeloid leukocyte | 3.45e-08 | 72 |