FFCP PHASE1:Hg19::chr2:174828892..174828972,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:174828892..174828972,-
|short_description=p2@SP3
|description=CAGE_peak_2_at_SP3_5end
|association_with_transcript=0bp_to_ENST00000418194,NM_001017371,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6670 | |EntrezGene=6670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11208 | |HGNC=11208 | ||
|TSSclassifier=strong | |||
|UniProt=Q02447,Q59FX5 | |UniProt=Q02447,Q59FX5 | ||
|association_with_transcript=0bp_to_ENST00000418194,NM_001017371,uc002uie.2_5end | |||
|cluster_id=chr2:174828892..174828972,- | |||
|description=CAGE_peak_2_at_SP3_5end | |||
|id=chr2:174828892..174828972,- | |||
|ontology_enrichment_celltype=CL:0002057!6.78e-19!42;CL:0000860!1.32e-16!45;CL:0000766!3.21e-16!76;CL:0000738!1.25e-15!140;CL:0000839!3.34e-14!70;CL:0000037!1.03e-13!172;CL:0000566!1.03e-13!172;CL:0002087!1.23e-13!119;CL:0002031!2.27e-13!124;CL:0002194!2.48e-13!63;CL:0000576!2.48e-13!63;CL:0000040!2.48e-13!63;CL:0000559!2.48e-13!63;CL:0000557!2.97e-13!71;CL:0002032!9.78e-13!165;CL:0000837!9.78e-13!165;CL:0002009!9.81e-13!65;CL:0000763!8.45e-12!112;CL:0000049!8.45e-12!112;CL:0000988!6.75e-11!182;CL:0000219!5.43e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.97e-17;33!CL:0002057;6.97e-17;33!CL:0000576;4.36e-13;48!CL:0000473;9.01e-12;39!CL:0000234;9.01e-12;39!CL:0000766;1.51e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.78e-19,42;CL:0002057,6.78e-19,42;CL:0000766,2.06e-18,72;CL:0000738,4.86e-17,136;CL:0000839,2.57e-16,66;CL:0000473,3.04e-16,48;CL:0000234,3.04e-16,48;CL:0002194,1.67e-15,59;CL:0000576,1.67e-15,59;CL:0000040,1.67e-15,59;CL:0000559,1.67e-15,59;CL:0000557,3.05e-15,67;CL:0002087,4.64e-15,115;CL:0000037,7.47e-15,168;CL:0002009,8.72e-15,61;CL:0002031,9.64e-15,120;CL:0002032,7.56e-14,161;CL:0000837,7.56e-14,161;CL:0000763,3.83e-13,108;CL:0000049,3.83e-13,108;CL:0000988,3.31e-12,177;CL:0000219,1.57e-07,386;CL:0002320,5.11e-07,361;CL:0000134,5.44e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;6.87e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-15!102;UBERON:0003061!1.51e-15!102;UBERON:0002193!2.64e-12!112;UBERON:0002371!4.09e-11!80;UBERON:0001474!4.18e-11!86;UBERON:0004765!2.26e-09!101;UBERON:0001434!2.26e-09!101;UBERON:0002405!1.28e-07!115;UBERON:0002384!3.30e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.79e-17,98;UBERON:0003061,2.79e-17,98;UBERON:0002193,1.09e-13,108;UBERON:0002371,1.00e-12,76;UBERON:0001474,1.23e-12,82;UBERON:0004765,2.22e-11,90;UBERON:0001434,5.89e-11,100;UBERON:0002405,3.48e-10,93;UBERON:0002384,9.21e-08,371 | |||
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| ||
|short_description=p2@SP3 | |||
}} | }} |
Latest revision as of 06:38, 18 September 2015
Short description: | p2@SP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000418194, NM_001017371, uc002uie.2_5end |
EntrezGene: | SP3 |
HGNC: | 11208 |
UniProt: | Q02447Q59FX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.78e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.78e-19 | 42 |
myeloid leukocyte | 2.06e-18 | 72 |
leukocyte | 4.86e-17 | 136 |
myeloid lineage restricted progenitor cell | 2.57e-16 | 66 |
defensive cell | 3.04e-16 | 48 |
phagocyte | 3.04e-16 | 48 |
monopoietic cell | 1.67e-15 | 59 |
monocyte | 1.67e-15 | 59 |
monoblast | 1.67e-15 | 59 |
promonocyte | 1.67e-15 | 59 |
granulocyte monocyte progenitor cell | 3.05e-15 | 67 |
nongranular leukocyte | 4.64e-15 | 115 |
hematopoietic stem cell | 7.47e-15 | 168 |
macrophage dendritic cell progenitor | 8.72e-15 | 61 |
hematopoietic lineage restricted progenitor cell | 9.64e-15 | 120 |
hematopoietic oligopotent progenitor cell | 7.56e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.56e-14 | 161 |
myeloid cell | 3.83e-13 | 108 |
common myeloid progenitor | 3.83e-13 | 108 |
hematopoietic cell | 3.31e-12 | 177 |
motile cell | 1.57e-07 | 386 |
connective tissue cell | 5.11e-07 | 361 |
mesenchymal cell | 5.44e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.79e-17 | 98 |
blood island | 2.79e-17 | 98 |
hemolymphoid system | 1.09e-13 | 108 |
bone marrow | 1.00e-12 | 76 |
bone element | 1.23e-12 | 82 |
skeletal element | 2.22e-11 | 90 |
skeletal system | 5.89e-11 | 100 |
immune system | 3.48e-10 | 93 |
connective tissue | 9.21e-08 | 371 |