FFCP PHASE1:Hg19::chr21:36260343..36260402,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=861 | |EntrezGene=861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10471 | |HGNC=10471 | ||
|TSSclassifier=strong | |||
|UniProt=Q01196 | |UniProt=Q01196 | ||
|association_with_transcript=-166bp_to_D10570_5end | |association_with_transcript=-166bp_to_D10570_5end | ||
|cluster_id=chr21:36260343..36260402,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_6_at_RUNX1_5end | |description=CAGE_peak_6_at_RUNX1_5end | ||
|id=chr21:36260343..36260402,- | |id=chr21:36260343..36260402,- | ||
|ontology_enrichment_celltype=CL:0000012!1.43e-21!682;CL:0002371!3.74e-21!591;CL:0000548!8.12e-21!679;CL:0000004!8.12e-21!679;CL:0000255!8.12e-21!679;CL:0000144!9.02e-21!625;CL:0002057!2.49e-18!42;CL:0000860!4.76e-16!45;CL:0000003!1.33e-13!722;CL:0000723!1.67e-13!436;CL:0000048!4.55e-13!430;CL:0000034!1.14e-12!444;CL:0002194!2.59e-11!63;CL:0000576!2.59e-11!63;CL:0000040!2.59e-11!63;CL:0000559!2.59e-11!63;CL:0000063!2.61e-11!578;CL:0002009!3.70e-10!65;CL:0002320!4.14e-10!365;CL:0000134!8.57e-10!358;CL:0000839!1.55e-09!70;CL:0000557!2.20e-09!71;CL:0000766!4.11e-09!76;CL:0000055!2.69e-07!180;CL:0000219!4.61e-07!390 | |ontology_enrichment_celltype=CL:0000012!1.43e-21!682;CL:0002371!3.74e-21!591;CL:0000548!8.12e-21!679;CL:0000004!8.12e-21!679;CL:0000255!8.12e-21!679;CL:0000144!9.02e-21!625;CL:0002057!2.49e-18!42;CL:0000860!4.76e-16!45;CL:0000003!1.33e-13!722;CL:0000723!1.67e-13!436;CL:0000048!4.55e-13!430;CL:0000034!1.14e-12!444;CL:0002194!2.59e-11!63;CL:0000576!2.59e-11!63;CL:0000040!2.59e-11!63;CL:0000559!2.59e-11!63;CL:0000063!2.61e-11!578;CL:0002009!3.70e-10!65;CL:0002320!4.14e-10!365;CL:0000134!8.57e-10!358;CL:0000839!1.55e-09!70;CL:0000557!2.20e-09!71;CL:0000766!4.11e-09!76;CL:0000055!2.69e-07!180;CL:0000219!4.61e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.48e-24;33!CL:0002057;6.48e-24;33!CL:0000473;5.93e-15;39!CL:0000234;5.93e-15;39!CL:0000576;1.74e-11;48!CL:0000766;4.02e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.39e-23,42;CL:0002057,5.39e-23,42;CL:0000473,6.74e-18,48;CL:0000234,6.74e-18,48;CL:0000723,5.92e-14,433;CL:0000034,1.75e-13,441;CL:0000048,2.48e-13,427;CL:0002194,4.36e-13,59;CL:0000576,4.36e-13,59;CL:0000040,4.36e-13,59;CL:0000559,4.36e-13,59;CL:0000766,3.42e-12,72;CL:0002009,3.82e-12,61;CL:0000557,7.26e-12,67;CL:0000839,9.82e-12,66;CL:0002320,7.64e-11,361;CL:0000134,1.05e-10,354;CL:0000219,4.58e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.29e-17;42 | |||
|ontology_enrichment_disease=DOID:2394!1.23e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.02e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.34e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.70e-12!167;UBERON:0002384!1.09e-09!375;UBERON:0002371!3.67e-08!80;UBERON:0001474!2.36e-07!86;UBERON:0004765!3.87e-07!101;UBERON:0001434!3.87e-07!101;UBERON:0003102!4.51e-07!95;UBERON:0000486!6.65e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.21e-12,167;UBERON:0004765,7.42e-11,90;UBERON:0002371,7.72e-11,76;UBERON:0002384,1.12e-10,371;UBERON:0001474,2.57e-10,82;UBERON:0001434,1.90e-09,100;UBERON:0002390,5.52e-08,98;UBERON:0003061,5.52e-08,98;UBERON:0000926,1.05e-07,315;UBERON:0004120,1.05e-07,315;UBERON:0006603,1.05e-07,315 | |||
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|phase1_expression=0.908391896352783,0.856402095563933,1.55049844505568,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,1.30592814099919,2.21160542851358,0,1.52908960491121,1.05506791291381,1.8564952944007,1.65698687863958,1.34465029290355,1.80808358407193,1.46062018077475,0.487932798790507,0.61560529038394,0.612002073732759,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,9.04737836752479,8.44424675813868,14.5527155917111,0.919421224478927,1.8072355126695,3.69754010166788,0,0,0.293600439334847,7.75593571944628,12.8348446380891,8.89744569934992,0.223915474239924,0.32389366601898,0.77272670290256,6.68831898385998,12.8477820854195,3.88134497900506,9.52959051313307,8.22335776043652,12.6979612066992,43.4415512406447,37.9117845663069,30.2697254257389,7.92915065694223,9.03678557017357,6.77132432971709,12.9887214284397,12.5536829026609,8.31476892446813,21.7319563583341,18.6138835704134,14.0654167675789,19.4612267110163,28.1243757246501,18.3276642729058,18.2831820336008,10.2129340444405,13.7020894779026,41.2047811021059,40.6756676367757,41.7002581833824,12.7133895553007,19.5187147073409,10.4432587855492,0.211255286311942,1.27562579979026,0.838634582033504,1.46027220490444,1.80212271409808,1.44653028027372,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,1.32171328579026,3.92355994087075,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.25618263945135,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0.604820229674197,1.06976078313403,0,0,0.670700859703636,0.511450247374121,2.1686349143074,0.50133791063589,2.462390822334,12.7245751528176,14.1124112387764,1.22895262313288,1.10864698731282,0.351339142772504,0.196468613246569,1.82147644146271,1.48313777113772,0.324547393654683,0.348259474598534,1.32957960518865,1.19245312152671,0.571994910780128,0.74291500265913,0,0,0,0,0.419499436209906,0,0.626984899610432,0,0,0,0.805658634218294,0,0,0,2.43042584364528,0,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,1.74437620857014,3.47880366186723,1.13967460498122,9.1362334761121,4.87622255272983,0,0,2.1349799145941,0.74000264525148,0.311211035399766,0.269421344139376,0.326923806226917,0.605429710579726,0.576175924479999,0.70296429550139,0.936480230490962,0.570471821544449,0.597794722207204,0.469737994575059,0.323745888736263,0.561803226808994,1.22492502752936,0.737005903870608,1.65321249881225,1.18800285728205,0.247266929278557,2.73048408581408,0,0.841680569770331,0.750711119231785,0.831192346452549,0,1.5324389789951,0.45071417671979,0.567160915800105,3.40840307808838,1.70845911054854,3.60284231971255,6.90209520994125,4.84346887420663,3.60696756063881,2.04728541964749,5.06328996723799,3.80004320128675,6.05841058185875,3.31379635112278,0.646584227275248,6.03516307278244,1.81353776809752,1.3564847384839,2.12586938479627,1.36373060295417,3.72845974005705,0,0,0,0.10366105501537,0,0,4.69348596989448,0,1.38134921352481,2.78620756819187,2.16563844500876,0.118306800039844,0.505754070234305,0.482022059766964,0.441175890929576,0.435758888184812,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,1.32438929824395,0,2.57351715447788,2.08525542276389,1.1240175325762,2.01057944823262,3.33318402570707,1.3032332212413,0,0,0.463721619900307,0.587043471179108,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0.936017060556951,0.445893486866185,0,3.69560682037491,1.27597587518148,2.23896306757121,1.16253575405585,0.766765358330422,23.1551721811093,1.84901711427775,0,0,0,0.253991577168676,0.381988425558278,0,0,0.205654985406647,0,0,0.448524337381443,1.30788020649984,0.80672114403045,5.04159691455333,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0.266422179016099,1.42977993658148,0.542621605391443,0,1.95441710576241,1.42156779497018,0.791951872933429,2.71295439353627,2.61460037580088,3.69900067373611,0,0.502257091432126,0,0,0,7.13184525203592,3.32997005335432,1.02738161275192,3.22309733831812,0.448340575974109,1.97030760201927,0,0.513372145118994,1.27047312111232,0,0,0.167516265334349,1.27587750330633,0,0,0,1.2269149171914,1.00034104211935,0.813795071099207,1.24782516918484,1.42743191037729,0.473107245101804,1.28855556491985,0.601892199455438,0,2.0694614258501,1.99267679560631,1.47495334833363,2.60650843404249,0.587403472388222,0,3.72182447021197,2.80428461064202,1.921096040462,0.606255142892519,1.66435439510497,0.604780586659361,1.73675465473144,6.1384789315225,1.12264037773229,2.17836553734692,4.60536524160033,2.2519548960105,1.48418066444991,1.3878872442239,3.72879623157567,4.5169935807595,2.07701771673448,2.5566283261191,0,6.01519410909855,1.65745780084613,0.803701137152247,1.0925470080403,2.22911505431021,1.80479845162965,2.77255213575893,0.784349769176855,0,3.0609972378934,1.13733384070897,0,0.215915916102139,0,0.541892875087706,1.0033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| ||
|short_description=p6@RUNX1 | |short_description=p6@RUNX1 | ||
}} | }} |
Latest revision as of 06:36, 18 September 2015
Short description: | p6@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RUNX1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -166bp_to_D10570_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | Q01196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.39e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.39e-23 | 42 |
defensive cell | 6.74e-18 | 48 |
phagocyte | 6.74e-18 | 48 |
somatic stem cell | 5.92e-14 | 433 |
stem cell | 1.75e-13 | 441 |
multi fate stem cell | 2.48e-13 | 427 |
monopoietic cell | 4.36e-13 | 59 |
monocyte | 4.36e-13 | 59 |
monoblast | 4.36e-13 | 59 |
promonocyte | 4.36e-13 | 59 |
myeloid leukocyte | 3.42e-12 | 72 |
macrophage dendritic cell progenitor | 3.82e-12 | 61 |
granulocyte monocyte progenitor cell | 7.26e-12 | 67 |
myeloid lineage restricted progenitor cell | 9.82e-12 | 66 |
connective tissue cell | 7.64e-11 | 361 |
mesenchymal cell | 1.05e-10 | 354 |
motile cell | 4.58e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.21e-12 | 167 |
skeletal element | 7.42e-11 | 90 |
bone marrow | 7.72e-11 | 76 |
connective tissue | 1.12e-10 | 371 |
bone element | 2.57e-10 | 82 |
skeletal system | 1.90e-09 | 100 |
hematopoietic system | 5.52e-08 | 98 |
blood island | 5.52e-08 | 98 |
mesoderm | 1.05e-07 | 315 |
mesoderm-derived structure | 1.05e-07 | 315 |
presumptive mesoderm | 1.05e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.34e-09 | 14 |