FFCP PHASE1:Hg19::chr1:161676969..161676980,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18504 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VXB1 | |||
|association_with_transcript=-18bp_to_ENST00000367957_5end | |||
|cluster_id=chr1:161676969..161676980,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_5_at_FCRLA_5end | |||
|id=chr1:161676969..161676980,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.74e-40!24;CL:0000826!5.74e-40!24;CL:0000236!2.50e-22!14;CL:0000542!4.55e-17!53;CL:0000051!4.55e-17!53;CL:0000838!6.75e-16!52;CL:0000148!2.70e-10!10;CL:0000541!2.70e-10!10;CL:0002077!5.92e-10!33;CL:0000710!2.68e-08!20;CL:0002567!1.38e-07!3;CL:0000817!5.33e-07!3;CL:0000147!6.29e-07!14;CL:0002620!7.22e-07!23;CL:0000325!7.92e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.82e-47;24!CL:0000148;7.90e-36;10!CL:0000147;2.23e-25;14!CL:0002567;2.89e-23;3!CL:0000236;4.28e-19;13!CL:0000710;1.59e-17;20!CL:0002077;8.72e-15;34!CL:0000542;3.51e-14;53!CL:0000075;9.18e-13;27!CL:0002566;7.55e-09;1!CL:0000946;2.55e-08;1!CL:0000785;2.55e-08;1!CL:0000819;2.55e-08;1!CL:0000786;2.55e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.03e-47,24;CL:0000826,2.03e-47,24;CL:0000148,7.34e-36,10;CL:0000541,7.34e-36,10;CL:0000147,2.12e-25,14;CL:0000236,5.64e-24,14;CL:0000542,1.78e-23,53;CL:0000051,1.78e-23,53;CL:0002567,2.89e-23,3;CL:0000838,1.28e-20,52;CL:0000710,1.54e-17,20;CL:0002077,4.52e-16,34;CL:0000785,4.95e-15,2;CL:0000955,4.95e-15,2;CL:0000818,4.95e-15,2;CL:0000954,4.95e-15,2;CL:0000816,4.95e-15,2;CL:0000075,8.94e-13,27;CL:0000817,2.49e-10,3;CL:0002087,2.61e-09,115;CL:0002566,7.56e-09,1;CL:0000819,1.71e-08,1;CL:0000946,3.06e-08,1;CL:0000786,3.06e-08,1;CL:0000980,3.06e-08,1;CL:0000333,1.06e-07,41;CL:0002031,1.66e-07,120;CL:0000738,1.73e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;6.13e-15;2!CL:0000051;3.51e-14;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.53e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.04e-15;2!DOID:0060058;1.19e-11;10!DOID:630;9.81e-09;1!DOID:0050177;9.81e-09;1!DOID:0050427;9.81e-09;1!DOID:0060073;2.55e-08;1!DOID:8675;2.55e-08;1!DOID:12603;2.55e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.16e-15,2;DOID:0060058,8.39e-12,10;DOID:630,1.02e-08,1;DOID:0050177,1.02e-08,1;DOID:0050427,1.02e-08,1;DOID:0060073,1.71e-08,1;DOID:8675,1.71e-08,1;DOID:12603,3.79e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.45e-11!45;UBERON:0002416!5.45e-11!45;UBERON:0002097!3.56e-10!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;7.93e-08;15!UBERON:0007376;7.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,9.42e-08,15;UBERON:0007376,9.42e-08,15;UBERON:0007383,9.42e-08,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,1.55991119954897,1.18066171970519,0,0,0,0,0,0,3.48602402611357,1.56386155736164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,2.66852776159066,1.28019066769952,2.00197993518006,0,1.32208974556972,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,1.35021065793013,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0,0,0.966304265816484,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,19.8113430191567,36.2889004280364,32.8208852188132,22.2394179829517,2.67351481028641,6.30720421472227,38.0149155398669,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0,0,0,0.886860307073351,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0,0,1.11481905075431,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.246169610922139,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64209310294099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,2.42638588066636,6.28023733798928,0,0,0,0.298509605773748,0,1.10961172300523,0,0,0,0,0,0,0.295710299979268,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688859918643263,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.515663103788617,2.69841120997308,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,3.20568492303233 | |||
|short_description=p5@FCRLA | |||
}} |
Latest revision as of 06:34, 18 September 2015
Short description: | p5@FCRLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FCRLA_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -18bp_to_ENST00000367957_5end |
EntrezGene: | FCRLA |
HGNC: | 18504 |
UniProt: | Q5VXB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.03e-47 | 24 |
pro-B cell | 2.03e-47 | 24 |
melanocyte | 7.34e-36 | 10 |
melanoblast | 7.34e-36 | 10 |
pigment cell | 2.12e-25 | 14 |
B cell | 5.64e-24 | 14 |
lymphocyte | 1.78e-23 | 53 |
common lymphoid progenitor | 1.78e-23 | 53 |
light melanocyte | 2.89e-23 | 3 |
lymphoid lineage restricted progenitor cell | 1.28e-20 | 52 |
neurecto-epithelial cell | 1.54e-17 | 20 |
ecto-epithelial cell | 4.52e-16 | 34 |
mature B cell | 4.95e-15 | 2 |
pre-B-II cell | 4.95e-15 | 2 |
transitional stage B cell | 4.95e-15 | 2 |
small pre-B-II cell | 4.95e-15 | 2 |
immature B cell | 4.95e-15 | 2 |
columnar/cuboidal epithelial cell | 8.94e-13 | 27 |
precursor B cell | 2.49e-10 | 3 |
nongranular leukocyte | 2.61e-09 | 115 |
dark melanocyte | 7.56e-09 | 1 |
B-1 B cell | 1.71e-08 | 1 |
antibody secreting cell | 3.06e-08 | 1 |
plasma cell | 3.06e-08 | 1 |
plasmablast | 3.06e-08 | 1 |
migratory neural crest cell | 1.06e-07 | 41 |
hematopoietic lineage restricted progenitor cell | 1.66e-07 | 120 |
leukocyte | 1.73e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 9.42e-08 | 15 |
outer epithelium | 9.42e-08 | 15 |
enveloping layer of ectoderm | 9.42e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.16e-15 | 2 |
lymphoma | 8.39e-12 | 10 |
genetic disease | 1.02e-08 | 1 |
monogenic disease | 1.02e-08 | 1 |
xeroderma pigmentosum | 1.02e-08 | 1 |
lymphatic system cancer | 1.71e-08 | 1 |
lymphosarcoma | 1.71e-08 | 1 |
acute leukemia | 3.79e-08 | 1 |