FFCP PHASE1:Hg19::chr10:44285890..44285891,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10151 | |EntrezGene=10151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=13729 | |HGNC=13729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000423264,NR_002726,uc010qfe.1_5end | |association_with_transcript=-25bp_to_ENST00000423264,NR_002726,uc010qfe.1_5end | ||
|cluster_id=chr10:44285890..44285891,- | |||
|description=CAGE_peak_1_at_HNRNPA3P1_5end | |description=CAGE_peak_1_at_HNRNPA3P1_5end | ||
|id=chr10:44285890..44285891,- | |id=chr10:44285890..44285891,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.10e-50;1!UBERON:0003056;8.69e-18;3 | |||
|ontology_enrichment_disease=DOID:14566!9.40e-10!239;DOID:162!4.04e-09!235;DOID:8692!4.30e-07!31;DOID:1240!4.42e-07!39 | |ontology_enrichment_disease=DOID:14566!9.40e-10!239;DOID:162!4.04e-09!235;DOID:8692!4.30e-07!31;DOID:1240!4.42e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:3307;6.30e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.32e-26,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.10e-50;1!UBERON:0001785;3.10e-50;1!UBERON:0002464;3.10e-50;1!UBERON:0004904;3.10e-50;1!UBERON:0001021;3.10e-50;1!UBERON:0003714;6.30e-26;2!UBERON:0005162;6.30e-26;2!UBERON:0000122;6.30e-26;2!UBERON:0000010;8.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.42e-50,1;UBERON:0001785,2.42e-50,1;UBERON:0002464,2.42e-50,1;UBERON:0004904,2.42e-50,1;UBERON:0001021,2.42e-50,1;UBERON:0003902,2.42e-50,1;UBERON:0005425,2.42e-50,1;UBERON:0003714,5.56e-26,2;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0001781,1.00e-13,4;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0000010,7.91e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0,0,0,0.619412741790207,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,1.0429658368404,0,0.605399502633369,0.736555271975129,0.632924774881769,0.633765858935825,0.425208599930087,0.419317291016752,0,0.150176892841506,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0.812411591295047,0,0,0.328875809207352,0,0.579606171470105,0.14828656316206,0.267540828089713,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0.348259474598534,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0.336672227908132,0.500474079487857,0,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0,0,0,0.265059536642971,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.71181185733329,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.567100388969546,0.179117045405697,0.290633938513962,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0.600686115687835,0,0.448524337381443,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0.656029291399411,0.976135183992909,0.206082023295445,0.0915694648183434,0.41254749960294,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0.432807638929335,0.142283686696828,0.159426272728822,0.59873811429845,0,0.635020748171649,0.973865820823666,0,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0.80719882876419,0.851692475380653,0,0.921722292925374,0.894704431569664,0.333698283423817,0.781552381608161,0.556812347790485,0,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0.121360521749513,0.557216921387392,0,0,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0.20453736500431,0.369254416383208,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.524759999977174,0,0.227586896570999,0.762760950878299,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0.221158519862449,0.295547618953547,0,0.21787692703798,0,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.392125068635479,0.335643173951685,0.948768663620925,0,0,0,0.282706142867882,0.216388639742091,0,0.0884575645033392,0,0,0.247127877893006,0.522109747527277,0,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.554698692052555,0,0.293977192243133,0,0,0,0,0,0,0.0969890164884194,0.529536760149002,0,0,0.19871461170299,0,0.391102765469606,0,0.213452994739353,0,0,0.458146384663663,0.171594997861965,0,0.372757606696298,0,0,0,0.713987523454252,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0.268733889946905,0,0,0.236349546921671,0,0.13480708770837,0.196854963029498,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0.236417121897595,0,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.471162288750703,0,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0.570930667089935,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.38582807654183,0,0.512483037175893,0,0,0,0,0.265729680626726,0.163565394255844,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0.127894371303652,0.539124056983409,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0.235939446695481,0,0.231051332300676,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0,0,0.672567444437648,0,0,0.177404740325278,0.345701962667338,0,0,0,0.236387681767936,0.111231401892069,0.235479278551542,0,0,0,0.215927591218621,0,0.0714765441766563,0,0.348724276104376,0.347716544605159,1.60342272946051,0,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0.294450700845729,0.243835849964539,0,0,0,0,0.233939463462106,0,0.356760272332706,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0.399764623699716,0.178553938605658,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0,0.535928260312357,0,0,0,0,0.129177819672012,0,0.224263725161227,0,0,0.435433495793923,0,0.134704106029175,0,0,0.89543595472072,0.640364075266293,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0,0,0,0.619412741790207,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,1.0429658368404,0,0.605399502633369,0.736555271975129,0.632924774881769,0.633765858935825,0.425208599930087,0.419317291016752,0,0.150176892841506,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0.812411591295047,0,0,0.328875809207352,0,0.579606171470105,0.14828656316206,0.267540828089713,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0.348259474598534,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0.336672227908132,0.500474079487857,0,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0,0,0,0.265059536642971,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.71181185733329,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.567100388969546,0.179117045405697,0.290633938513962,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0.600686115687835,0,0.448524337381443,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0.656029291399411,0.976135183992909,0.206082023295445,0.0915694648183434,0.41254749960294,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0.432807638929335,0.142283686696828,0.159426272728822,0.59873811429845,0,0.635020748171649,0.973865820823666,0,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0.80719882876419,0.851692475380653,0,0.921722292925374,0.894704431569664,0.333698283423817,0.781552381608161,0.556812347790485,0,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0.121360521749513,0.557216921387392,0,0,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0.20453736500431,0.369254416383208,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.524759999977174,0,0.227586896570999,0.762760950878299,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0.221158519862449,0.295547618953547,0,0.21787692703798,0,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.392125068635479,0.335643173951685,0.948768663620925,0,0,0,0.282706142867882,0.216388639742091,0,0.0884575645033392,0,0,0.247127877893006,0.522109747527277,0,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.554698692052555,0,0.293977192243133,0,0,0,0,0,0,0.0969890164884194,0.529536760149002,0,0,0.19871461170299,0,0.391102765469606,0,0.213452994739353,0,0,0.458146384663663,0.171594997861965,0,0.372757606696298,0,0,0,0.713987523454252,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0.268733889946905,0,0,0.236349546921671,0,0.13480708770837,0.196854963029498,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0.236417121897595,0,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.471162288750703,0,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0.570930667089935,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.38582807654183,0,0.512483037175893,0,0,0,0,0.265729680626726,0.163565394255844,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0.127894371303652,0.539124056983409,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0.235939446695481,0,0.231051332300676,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0,0,0.672567444437648,0,0,0.177404740325278,0.345701962667338,0,0,0,0.236387681767936,0.111231401892069,0.235479278551542,0,0,0,0.215927591218621,0,0.0714765441766563,0,0.348724276104376,0.347716544605159,1.60342272946051,0,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0.294450700845729,0.243835849964539,0,0,0,0,0.233939463462106,0,0.356760272332706,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0.399764623699716,0.178553938605658,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0,0.535928260312357,0,0,0,0,0.129177819672012,0,0.224263725161227,0,0,0.435433495793923,0,0.134704106029175,0,0,0.89543595472072,0.640364075266293,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p1@HNRNPA3P1 | |short_description=p1@HNRNPA3P1 | ||
}} | }} |
Latest revision as of 06:33, 18 September 2015
Short description: | p1@HNRNPA3P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNRNPA3P1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000423264, NR_002726, uc010qfe.1_5end |
EntrezGene: | HNRNPA3P1 |
HGNC: | 13729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.42e-50 | 1 |
cranial nerve | 2.42e-50 | 1 |
nerve trunk | 2.42e-50 | 1 |
nerve connecting eye with brain | 2.42e-50 | 1 |
nerve | 2.42e-50 | 1 |
retinal neural layer | 2.42e-50 | 1 |
presumptive neural retina | 2.42e-50 | 1 |
neural tissue | 5.56e-26 | 2 |
multi cell component structure | 5.56e-26 | 2 |
neuron projection bundle | 5.56e-26 | 2 |
layer of retina | 1.00e-13 | 4 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
peripheral nervous system | 7.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.32e-26 | 2 |