FFCP PHASE1:Hg19::chr21:36231861..36231877,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=861 | |EntrezGene=861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10471 | |HGNC=10471 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467577_5end | |association_with_transcript=0bp_to_ENST00000467577_5end | ||
|cluster_id=chr21:36231861..36231877,- | |||
|description=CAGE_peak_12_at_RUNX1_5end | |description=CAGE_peak_12_at_RUNX1_5end | ||
|id=chr21:36231861..36231877,- | |id=chr21:36231861..36231877,- | ||
|ontology_enrichment_celltype=CL:0000134!4.35e-14!358;CL:0002320!2.15e-13!365;CL:0000003!1.39e-12!722;CL:0000763!3.29e-12!112;CL:0000049!3.29e-12!112;CL:0000766!6.04e-12!76;CL:0000063!1.20e-11!578;CL:0002057!3.42e-11!42;CL:0000219!5.86e-11!390;CL:0000723!2.32e-10!436;CL:0000012!2.32e-10!682;CL:0000048!2.96e-10!430;CL:0000860!3.18e-10!45;CL:0000144!3.87e-10!625;CL:0000034!4.31e-10!444;CL:0002194!5.57e-10!63;CL:0000576!5.57e-10!63;CL:0000040!5.57e-10!63;CL:0000559!5.57e-10!63;CL:0000839!1.32e-09!70;CL:0000548!1.67e-09!679;CL:0000004!1.67e-09!679;CL:0000255!1.67e-09!679;CL:0000557!3.89e-09!71;CL:0002009!5.55e-09!65;CL:0000037!5.91e-09!172;CL:0000566!5.91e-09!172;CL:0002371!8.52e-09!591;CL:0000988!3.58e-08!182;CL:0002032!3.97e-08!165;CL:0000837!3.97e-08!165 | |ontology_enrichment_celltype=CL:0000134!4.35e-14!358;CL:0002320!2.15e-13!365;CL:0000003!1.39e-12!722;CL:0000763!3.29e-12!112;CL:0000049!3.29e-12!112;CL:0000766!6.04e-12!76;CL:0000063!1.20e-11!578;CL:0002057!3.42e-11!42;CL:0000219!5.86e-11!390;CL:0000723!2.32e-10!436;CL:0000012!2.32e-10!682;CL:0000048!2.96e-10!430;CL:0000860!3.18e-10!45;CL:0000144!3.87e-10!625;CL:0000034!4.31e-10!444;CL:0002194!5.57e-10!63;CL:0000576!5.57e-10!63;CL:0000040!5.57e-10!63;CL:0000559!5.57e-10!63;CL:0000839!1.32e-09!70;CL:0000548!1.67e-09!679;CL:0000004!1.67e-09!679;CL:0000255!1.67e-09!679;CL:0000557!3.89e-09!71;CL:0002009!5.55e-09!65;CL:0000037!5.91e-09!172;CL:0000566!5.91e-09!172;CL:0002371!8.52e-09!591;CL:0000988!3.58e-08!182;CL:0002032!3.97e-08!165;CL:0000837!3.97e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.02e-29;33!CL:0002057;3.02e-29;33!CL:0000473;2.13e-21;39!CL:0000234;2.13e-21;39!CL:0000576;7.36e-14;48!CL:0000766;2.01e-11;69!CL:0000763;6.58e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.30e-23,42;CL:0002057,5.30e-23,42;CL:0000473,6.59e-22,48;CL:0000234,6.59e-22,48;CL:0000763,2.19e-21,108;CL:0000049,2.19e-21,108;CL:0000766,2.38e-21,72;CL:0000134,2.76e-18,354;CL:0002194,8.04e-18,59;CL:0000576,8.04e-18,59;CL:0000040,8.04e-18,59;CL:0000559,8.04e-18,59;CL:0002320,2.24e-17,361;CL:0000839,2.43e-17,66;CL:0000557,6.35e-17,67;CL:0002009,6.57e-17,61;CL:0000219,3.23e-14,386;CL:0000034,9.50e-14,441;CL:0000048,1.64e-13,427;CL:0000723,1.74e-13,433;CL:0000037,2.67e-13,168;CL:0002032,4.55e-13,161;CL:0000837,4.55e-13,161;CL:0000988,2.03e-12,177;CL:0000738,1.76e-10,136;CL:0002087,2.39e-08,115;CL:0002031,2.61e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-17;42!CL:0000049;6.43e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.11e-13!375;UBERON:0002390!3.01e-10!102;UBERON:0003061!3.01e-10!102;UBERON:0002371!5.90e-09!80;UBERON:0002193!8.10e-09!112;UBERON:0001474!2.27e-07!86 | |ontology_enrichment_uberon=UBERON:0002384!5.11e-13!375;UBERON:0002390!3.01e-10!102;UBERON:0003061!3.01e-10!102;UBERON:0002371!5.90e-09!80;UBERON:0002193!8.10e-09!112;UBERON:0001474!2.27e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.54e-17,371;UBERON:0002371,7.58e-16,76;UBERON:0002390,1.03e-14,98;UBERON:0003061,1.03e-14,98;UBERON:0001474,6.83e-14,82;UBERON:0002193,4.75e-13,108;UBERON:0002405,1.20e-12,93;UBERON:0001434,6.96e-12,100;UBERON:0004765,1.01e-11,90 | |||
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|phase1_expression=0.908391896352783,1.71280419112787,0.704772020479856,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,0.527533956456907,0.74259811776028,0,0.672325146451775,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.376627918784408,0,0.0821005894499457,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0.387336002901508,0.284338464974843,0.587200878669695,0,0.601633342410425,0.651032612147555,0,0,0,3.48955773070955,4.1566353805769,1.94067248950253,2.55671940596253,2.05583944010913,2.78735733805593,8.05538698502021,9.99026755463492,5.43909128743746,1.03423704220986,0,0,5.83551252582075,3.82068610080984,2.24723484445085,4.28517449319264,1.92557416245656,2.55734850319616,4.28806690242731,8.7764009353518,6.81959600852311,5.22376629531451,1.13477044938228,1.86846674698672,9.2962006144995,7.82224377630302,4.12658804939722,3.02699751316684,1.10483290796269,2.53169909952708,0.211255286311942,0.425208599930087,0.209658645508376,0.44931452458598,0.300353785683013,0.16072558669708,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.764546456250458,1.32171328579026,1.12101712596307,0.790152254325231,0.393419540227666,0.393010762749165,1.43921049299656,0,0,0,0,0.557052284425868,0,0.443067789167242,0,0.640456598628376,0.260118695119756,0.657751618414705,0.829050053357545,0.579606171470105,0.14828656316206,0.802622484269139,1.04535523804977,0.679856056185397,0.766440987203842,1.03088233644789,1.01207876807801,0.637130828648193,0,0,0,0.255973222308837,0,0,0,0.604820229674197,1.87208137048455,0.579297615531196,2.43806866313962,0.670700859703636,0,0.722878304769133,1.50401373190767,1.73815822752988,2.3858578411533,2.91980922181582,0.378139268656271,0.443458794925128,0.702678285545008,0.0654895377488563,0.364295288292542,0.370784442784429,0.649094787309367,0.522389211897802,0.930705723632056,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,0,0.436094052142534,1.98788780678127,0.25326102332916,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0.74000264525148,0,0,0,0.151357427644931,1.72852777344,0.234321431833797,0,0,0.448346041655403,0.117434498643765,0.323745888736263,0.140450806702248,0,0.122834317311768,0.309977343527296,1.18800285728205,0.989067717114227,0,1.43723628363248,0.336672227908132,0,0.277064115484183,0,1.22595118319608,0.150238058906597,0.113432183160021,0.538168907066586,0.640672166455702,1.48352330811693,1.20036438433761,0.824420233907511,0.257640540045629,0.930584281657949,0.506328996723799,0.584622030967192,1.00973509697646,0.828449087780694,0,0,0.403008392910561,0.508681776931463,0.386521706326594,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,1.38134921352481,1.39310378409594,0,0.709840800239063,0,0.723033089650446,0,0.435758888184812,0.71181185733329,0.269662616320329,0.196221465125346,0,0,0,1.2347220339942,0,0,0,0,3.09024169590255,0,0,1.53650399572076,0,0.603173834469785,0.648119116109707,0.325808305310325,0,1.44331342025273,0.115930404975077,0,0,0.462985512576611,0,0.790204397959275,1.71697232418975,0.738651018262192,0.702012795417713,0.297262324577456,0,0.503946384596579,0.567100388969546,0,0.871901815541886,1.15014803749563,1.47798971368783,2.46535615237033,0.414656231081544,0.144119953416961,0.50496973370552,0,0,0,0,0.308482478109971,0.600686115687835,0.285826432630578,0.112131084345361,0.43596006883328,0.07333828582095,0.646358578788889,3.57656445851882,0.845302752556,0.531876233169741,0,0,0,0.799266537048298,0.285955987316295,0,1.64648067356154,0,1.06617584622764,0,0.301439377059586,0,1.59956785891291,0,1.00451418286425,2.10833939483032,0.239624855491583,1.14861935834114,0,0,0.821905290201534,0.537182889719687,0.224170287987055,0,0.862510299438069,0.77005821767849,1.01637849688985,0,0,0.167516265334349,0,2.99602809578873,11.966458368161,2.07207756718018,0.49076596687656,0.500170521059677,0,0.415941723061614,0.535286966391485,0.946214490203608,0.468565659970853,0,2.27407504055985,0,0,0.184369168541703,0.60818530127658,0,0,0.206768026122887,0.647142602455851,1.17400313583789,0.303127571446259,3.32870879020994,1.20956117331872,0.744323423456331,0.306923946576125,3.08726103876381,1.53766979106841,0.511707249066704,3.05622450172854,0,1.23367755042124,1.06537035187876,0.328508624055237,1.03850885836724,0.116210378459959,0.362578348774867,2.20557117333613,0.920809889358963,0.68888668898764,0.728364672026868,0.786746489756545,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0.447749509444357,0,0,0.769350375349168,0,0.650756789328606,0.206082023295445,0,0,0,1.30012049207304,1.6068392984416,0.580024309752732,0.154048617114644,0.307007349452259,0.275673144969061,0.214840489736547,0.435050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| ||
|short_description=p12@RUNX1 | |short_description=p12@RUNX1 | ||
}} | }} |
Latest revision as of 06:28, 18 September 2015
Short description: | p12@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RUNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000467577_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.30e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.30e-23 | 42 |
defensive cell | 6.59e-22 | 48 |
phagocyte | 6.59e-22 | 48 |
myeloid cell | 2.19e-21 | 108 |
common myeloid progenitor | 2.19e-21 | 108 |
myeloid leukocyte | 2.38e-21 | 72 |
mesenchymal cell | 2.76e-18 | 354 |
monopoietic cell | 8.04e-18 | 59 |
monocyte | 8.04e-18 | 59 |
monoblast | 8.04e-18 | 59 |
promonocyte | 8.04e-18 | 59 |
connective tissue cell | 2.24e-17 | 361 |
myeloid lineage restricted progenitor cell | 2.43e-17 | 66 |
granulocyte monocyte progenitor cell | 6.35e-17 | 67 |
macrophage dendritic cell progenitor | 6.57e-17 | 61 |
motile cell | 3.23e-14 | 386 |
stem cell | 9.50e-14 | 441 |
multi fate stem cell | 1.64e-13 | 427 |
somatic stem cell | 1.74e-13 | 433 |
hematopoietic stem cell | 2.67e-13 | 168 |
hematopoietic oligopotent progenitor cell | 4.55e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.55e-13 | 161 |
hematopoietic cell | 2.03e-12 | 177 |
leukocyte | 1.76e-10 | 136 |
nongranular leukocyte | 2.39e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.61e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.54e-17 | 371 |
bone marrow | 7.58e-16 | 76 |
hematopoietic system | 1.03e-14 | 98 |
blood island | 1.03e-14 | 98 |
bone element | 6.83e-14 | 82 |
hemolymphoid system | 4.75e-13 | 108 |
immune system | 1.20e-12 | 93 |
skeletal system | 6.96e-12 | 100 |
skeletal element | 1.01e-11 | 90 |