FFCP PHASE1:Hg19::chr11:47788985..47789006,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:47788985..47789006,-
|short_description=p3@FNBP4
|description=CAGE_peak_3_at_FNBP4_5end
|association_with_transcript=0bp_to_ENST00000540172,ENST0000054297...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23360 | |EntrezGene=23360 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19752 | |HGNC=19752 | ||
|UniProt=F5GXL1, | |TSSclassifier=strong | ||
|UniProt=F5GXL1,B3KNP0,Q8N3X1 | |||
|association_with_transcript=0bp_to_ENST00000540172,ENST00000542975,NM_015308,uc001ngl.2,uc009ylv.2_5end | |||
|cluster_id=chr11:47788985..47789006,- | |||
|description=CAGE_peak_3_at_FNBP4_5end | |||
|id=chr11:47788985..47789006,- | |||
|ontology_enrichment_celltype=CL:0000838!1.54e-09!52;CL:0000542!1.93e-09!53;CL:0000051!1.93e-09!53;CL:0000037!8.76e-07!172;CL:0000566!8.76e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.32e-08;18!CL:0000789;3.32e-08;18!CL:0002419;3.32e-08;18!CL:0000542;8.45e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.20e-11,52;CL:0000542,8.38e-11,53;CL:0000051,8.38e-11,53;CL:0000791,1.08e-08,18;CL:0000789,1.08e-08,18;CL:0002420,1.08e-08,18;CL:0002419,1.08e-08,18;CL:0000790,1.08e-08,18;CL:0000037,3.44e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.84e-11;82!CL:0000790;3.32e-08;18!CL:0000051;8.45e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-29!115;UBERON:0000073!3.85e-26!94;UBERON:0001016!3.85e-26!94;UBERON:0005743!7.35e-26!86;UBERON:0001017!1.35e-25!82;UBERON:0001049!1.71e-25!57;UBERON:0005068!1.71e-25!57;UBERON:0006241!1.71e-25!57;UBERON:0007135!1.71e-25!57;UBERON:0000955!5.93e-23!69;UBERON:0006238!5.93e-23!69;UBERON:0002616!2.79e-21!59;UBERON:0003080!8.49e-20!42;UBERON:0002780!1.56e-19!41;UBERON:0001890!1.56e-19!41;UBERON:0006240!1.56e-19!41;UBERON:0002346!6.18e-19!90;UBERON:0003075!2.24e-17!86;UBERON:0007284!2.24e-17!86;UBERON:0002020!1.14e-16!34;UBERON:0003528!1.14e-16!34;UBERON:0001893!2.20e-16!34;UBERON:0002791!7.23e-16!33;UBERON:0001869!1.46e-15!32;UBERON:0003056!1.04e-12!61;UBERON:0000153!1.27e-12!129;UBERON:0007811!1.27e-12!129;UBERON:0000924!3.06e-12!173;UBERON:0006601!3.06e-12!173;UBERON:0002619!3.69e-12!22;UBERON:0000956!1.10e-11!25;UBERON:0000203!1.10e-11!25;UBERON:0000033!3.20e-11!123;UBERON:0001950!3.88e-11!20;UBERON:0004121!4.20e-11!169;UBERON:0003076!6.56e-07!15;UBERON:0003057!6.56e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.14e-20;41!UBERON:0001890;7.14e-20;41!UBERON:0003528;9.43e-20;34!UBERON:0002020;9.43e-20;34!UBERON:0002791;1.69e-19;32!UBERON:0001869;1.78e-19;32!UBERON:0001893;2.30e-19;34!UBERON:0000073;1.11e-18;53!UBERON:0002616;1.11e-18;53!UBERON:0002619;1.51e-17;22!UBERON:0001950;7.33e-16;20!UBERON:0000956;8.20e-16;25!UBERON:0000203;8.20e-16;25!UBERON:0001017;3.80e-14;75!UBERON:0000955;2.21e-13;68!UBERON:0001016;9.44e-13;83!UBERON:0007023;1.86e-09;114!UBERON:0000125;3.80e-09;9!UBERON:0002308;3.80e-09;9!UBERON:0009663;1.64e-07;7!UBERON:0004732;4.23e-07;13!UBERON:0002420;5.02e-07;9!UBERON:0007245;5.02e-07;9!UBERON:0010009;5.02e-07;9!UBERON:0010011;5.02e-07;9!UBERON:0000454;5.02e-07;9!UBERON:0000200;8.54e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.35e-35,56;UBERON:0005068,1.35e-35,56;UBERON:0006241,1.35e-35,56;UBERON:0007135,1.35e-35,56;UBERON:0001016,6.99e-34,89;UBERON:0000073,3.01e-33,53;UBERON:0002616,3.01e-33,53;UBERON:0001017,7.65e-33,81;UBERON:0007023,4.80e-31,114;UBERON:0000955,2.13e-29,68;UBERON:0006238,2.13e-29,68;UBERON:0002780,4.31e-28,41;UBERON:0001890,4.31e-28,41;UBERON:0003080,4.31e-28,41;UBERON:0006240,4.31e-28,41;UBERON:0002346,6.73e-24,86;UBERON:0003528,1.23e-23,34;UBERON:0002020,1.23e-23,34;UBERON:0001893,3.33e-23,34;UBERON:0003075,3.00e-22,82;UBERON:0007284,3.00e-22,82;UBERON:0001869,6.35e-22,32;UBERON:0002791,6.74e-22,32;UBERON:0002619,1.23e-17,22;UBERON:0010371,9.50e-17,104;UBERON:0003056,2.43e-16,61;UBERON:0001950,4.73e-16,20;UBERON:0000956,5.77e-16,25;UBERON:0000203,5.77e-16,25;UBERON:0004121,4.19e-14,171;UBERON:0000924,4.19e-14,171;UBERON:0006601,4.19e-14,171;UBERON:0011216,4.96e-12,223;UBERON:0010314,8.25e-11,132;UBERON:0000125,2.41e-09,9;UBERON:0002308,2.41e-09,9;UBERON:0003076,1.20e-08,15;UBERON:0003057,1.20e-08,15;UBERON:0009663,1.31e-07,7;UBERON:0004732,2.76e-07,13;UBERON:0002420,3.58e-07,9;UBERON:0007245,3.58e-07,9;UBERON:0010009,3.58e-07,9;UBERON:0010011,3.58e-07,9;UBERON:0000454,3.58e-07,9;UBERON:0000200,7.30e-07,6 | |||
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|short_description=p3@FNBP4 | |||
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Latest revision as of 06:25, 18 September 2015
Short description: | p3@FNBP4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FNBP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000540172, ENST00000542975, NM_015308, uc001ngl.2, uc009ylv.2_5end |
EntrezGene: | FNBP4 |
HGNC: | 19752 |
UniProt: | F5GXL1B3KNP0Q8N3X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.20e-11 | 52 |
lymphocyte | 8.38e-11 | 53 |
common lymphoid progenitor | 8.38e-11 | 53 |
mature alpha-beta T cell | 1.08e-08 | 18 |
alpha-beta T cell | 1.08e-08 | 18 |
immature T cell | 1.08e-08 | 18 |
mature T cell | 1.08e-08 | 18 |
immature alpha-beta T cell | 1.08e-08 | 18 |
hematopoietic stem cell | 3.44e-07 | 168 |