FFCP PHASE1:Hg19::chr6:33239845..33239859,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:33239845..33239859,+
|short_description=p1@RPS18
|description=CAGE_peak_1_at_RPS18_5end
|association_with_transcript=0bp_to_ENST00000474973,NM_022551,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6222 | |EntrezGene=6222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10401 | |HGNC=10401 | ||
|TSSclassifier=strong | |||
|UniProt=P62269 | |UniProt=P62269 | ||
|association_with_transcript=0bp_to_ENST00000474973,NM_022551,uc003odp.1,uc010jum.1_5end | |||
|cluster_id=chr6:33239845..33239859,+ | |||
|coexpression_cluster_id=C4341 | |||
|description=CAGE_peak_1_at_RPS18_5end | |||
|id=chr6:33239845..33239859,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.81e-15!52;CL:0000542!1.72e-14!53;CL:0000051!1.72e-14!53;CL:0000003!6.70e-11!722;CL:0000791!1.12e-09!18;CL:0000789!1.12e-09!18;CL:0002420!1.12e-09!18;CL:0002419!1.12e-09!18;CL:0000790!1.12e-09!18;CL:0000084!3.28e-09!25;CL:0000827!3.28e-09!25;CL:0000012!3.41e-09!682;CL:0000548!4.00e-08!679;CL:0000004!4.00e-08!679;CL:0000255!4.00e-08!679;CL:0002087!3.80e-07!119;CL:0000945!6.50e-07!24;CL:0000826!6.50e-07!24;CL:0000144!6.59e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.13e-09;18!CL:0000789;1.13e-09;18!CL:0002419;1.13e-09;18!CL:0000542;2.18e-09;53!CL:0000084;3.26e-09;25!CL:0000945;6.56e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.81e-15,52;CL:0000542,1.72e-14,53;CL:0000051,1.72e-14,53;CL:0000791,1.12e-09,18;CL:0000789,1.12e-09,18;CL:0002420,1.12e-09,18;CL:0002419,1.12e-09,18;CL:0000790,1.12e-09,18;CL:0000084,3.28e-09,25;CL:0000827,3.28e-09,25;CL:0002087,1.38e-07,115;CL:0002031,5.13e-07,120;CL:0000945,6.50e-07,24;CL:0000826,6.50e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.13e-09;18!CL:0000051;2.18e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RPS18 | |||
}} | }} |
Latest revision as of 06:22, 18 September 2015
Short description: | p1@RPS18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS18_5end |
Coexpression cluster: | C4341_CD8_CD4_CD133_CD19_CD34_skeletal_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000474973, NM_022551, uc003odp.1, uc010jum.1_5end |
EntrezGene: | RPS18 |
HGNC: | 10401 |
UniProt: | P62269 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.81e-15 | 52 |
lymphocyte | 1.72e-14 | 53 |
common lymphoid progenitor | 1.72e-14 | 53 |
mature alpha-beta T cell | 1.12e-09 | 18 |
alpha-beta T cell | 1.12e-09 | 18 |
immature T cell | 1.12e-09 | 18 |
mature T cell | 1.12e-09 | 18 |
immature alpha-beta T cell | 1.12e-09 | 18 |
T cell | 3.28e-09 | 25 |
pro-T cell | 3.28e-09 | 25 |
nongranular leukocyte | 1.38e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 5.13e-07 | 120 |
lymphocyte of B lineage | 6.50e-07 | 24 |
pro-B cell | 6.50e-07 | 24 |