FFCP PHASE1:Hg19::chr13:96329361..96329380,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:96329361..96329380,+ to FFCP PHASE1:Hg19::chr13:96329361..96329380,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5611 | |EntrezGene=5611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9439 | |HGNC=9439 | ||
|TSSclassifier=strong | |||
|UniProt=A8KA82,Q13217 | |UniProt=A8KA82,Q13217 | ||
|association_with_transcript=-12bp_to_NM_006260_5end | |||
|cluster_id=chr13:96329361..96329380,+ | |||
|description=CAGE_peak_2_at_DNAJC3_5end | |||
|id=chr13:96329361..96329380,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.15e-24!76;CL:0000557!4.71e-22!71;CL:0002009!8.78e-19!65;CL:0000738!1.26e-18!140;CL:0000839!1.30e-18!70;CL:0002194!1.24e-17!63;CL:0000576!1.24e-17!63;CL:0000040!1.24e-17!63;CL:0000559!1.24e-17!63;CL:0002057!2.74e-16!42;CL:0000763!1.84e-15!112;CL:0000049!1.84e-15!112;CL:0000860!1.81e-13!45;CL:0000037!1.02e-12!172;CL:0000566!1.02e-12!172;CL:0002031!2.36e-12!124;CL:0000988!3.04e-11!182;CL:0002032!5.25e-11!165;CL:0000837!5.25e-11!165;CL:0002087!5.70e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.40e-13;39!CL:0000234;5.40e-13;39!CL:0000860;1.91e-12;33!CL:0002057;1.91e-12;33!CL:0000766;1.55e-11;69!CL:0000576;9.89e-11;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.28e-26,72;CL:0000557,1.25e-24,67;CL:0002009,3.19e-21,61;CL:0000839,6.67e-21,66;CL:0002194,5.12e-20,59;CL:0000576,5.12e-20,59;CL:0000040,5.12e-20,59;CL:0000559,5.12e-20,59;CL:0000738,5.18e-20,136;CL:0000473,2.80e-19,48;CL:0000234,2.80e-19,48;CL:0000763,6.85e-17,108;CL:0000049,6.85e-17,108;CL:0000860,2.74e-16,42;CL:0002057,2.74e-16,42;CL:0000037,1.17e-13,168;CL:0002031,1.76e-13,120;CL:0000988,1.87e-12,177;CL:0002087,4.92e-12,115;CL:0002032,6.97e-12,161;CL:0000837,6.97e-12,161;CL:0000134,8.53e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.65e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.15e-19!102;UBERON:0003061!4.15e-19!102;UBERON:0002371!2.51e-18!80;UBERON:0002193!1.34e-17!112;UBERON:0001474!3.82e-16!86;UBERON:0004765!6.23e-15!101;UBERON:0001434!6.23e-15!101;UBERON:0007023!4.32e-14!115;UBERON:0002405!8.06e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.26e-21,98;UBERON:0003061,7.26e-21,98;UBERON:0002371,2.29e-20,76;UBERON:0002193,3.84e-19,108;UBERON:0001474,6.67e-18,82;UBERON:0004765,8.65e-18,90;UBERON:0002405,1.28e-17,93;UBERON:0001434,2.51e-16,100;UBERON:0007023,4.25e-14,114 | |||
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| ||
|short_description=p2@DNAJC3 | |||
}} | }} |
Latest revision as of 06:18, 18 September 2015
Short description: | p2@DNAJC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DNAJC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_NM_006260_5end |
EntrezGene: | DNAJC3 |
HGNC: | 9439 |
UniProt: | A8KA82Q13217 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.28e-26 | 72 |
granulocyte monocyte progenitor cell | 1.25e-24 | 67 |
macrophage dendritic cell progenitor | 3.19e-21 | 61 |
myeloid lineage restricted progenitor cell | 6.67e-21 | 66 |
monopoietic cell | 5.12e-20 | 59 |
monocyte | 5.12e-20 | 59 |
monoblast | 5.12e-20 | 59 |
promonocyte | 5.12e-20 | 59 |
leukocyte | 5.18e-20 | 136 |
defensive cell | 2.80e-19 | 48 |
phagocyte | 2.80e-19 | 48 |
myeloid cell | 6.85e-17 | 108 |
common myeloid progenitor | 6.85e-17 | 108 |
classical monocyte | 2.74e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.74e-16 | 42 |
hematopoietic stem cell | 1.17e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 1.76e-13 | 120 |
hematopoietic cell | 1.87e-12 | 177 |
nongranular leukocyte | 4.92e-12 | 115 |
hematopoietic oligopotent progenitor cell | 6.97e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.97e-12 | 161 |
mesenchymal cell | 8.53e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.26e-21 | 98 |
blood island | 7.26e-21 | 98 |
bone marrow | 2.29e-20 | 76 |
hemolymphoid system | 3.84e-19 | 108 |
bone element | 6.67e-18 | 82 |
skeletal element | 8.65e-18 | 90 |
immune system | 1.28e-17 | 93 |
skeletal system | 2.51e-16 | 100 |
adult organism | 4.25e-14 | 114 |