FFCP PHASE1:Hg19::chr16:85936539..85936562,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3394 | |EntrezGene=3394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5358 | |HGNC=5358 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=221bp_to_uc002fji.2_5end | |association_with_transcript=221bp_to_uc002fji.2_5end | ||
|cluster_id=chr16:85936539..85936562,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_3_at_IRF8_5end | |description=CAGE_peak_3_at_IRF8_5end | ||
|id=chr16:85936539..85936562,+ | |id=chr16:85936539..85936562,+ | ||
|ontology_enrichment_celltype=CL:0000945!9.48e-57!24;CL:0000826!9.48e-57!24;CL:0000542!3.11e-52!53;CL:0000051!3.11e-52!53;CL:0000838!6.63e-50!52;CL:0000236!5.29e-34!14;CL:0000738!9.17e-34!140;CL:0002087!2.37e-28!119;CL:0000037!3.75e-28!172;CL:0000566!3.75e-28!172;CL:0000988!6.37e-26!182;CL:0002031!1.39e-23!124;CL:0002032!2.82e-21!165;CL:0000837!2.82e-21!165;CL:0000784!1.80e-10!3;CL:0000134!2.45e-07!358;CL:0000084!3.01e-07!25;CL:0000827!3.01e-07!25;CL:0002320!5.50e-07!365;CL:0000785!8.27e-07!2;CL:0000955!8.27e-07!2;CL:0000818!8.27e-07!2;CL:0000954!8.27e-07!2;CL:0000816!8.27e-07!2 | |ontology_enrichment_celltype=CL:0000945!9.48e-57!24;CL:0000826!9.48e-57!24;CL:0000542!3.11e-52!53;CL:0000051!3.11e-52!53;CL:0000838!6.63e-50!52;CL:0000236!5.29e-34!14;CL:0000738!9.17e-34!140;CL:0002087!2.37e-28!119;CL:0000037!3.75e-28!172;CL:0000566!3.75e-28!172;CL:0000988!6.37e-26!182;CL:0002031!1.39e-23!124;CL:0002032!2.82e-21!165;CL:0000837!2.82e-21!165;CL:0000784!1.80e-10!3;CL:0000134!2.45e-07!358;CL:0000084!3.01e-07!25;CL:0000827!3.01e-07!25;CL:0002320!5.50e-07!365;CL:0000785!8.27e-07!2;CL:0000955!8.27e-07!2;CL:0000818!8.27e-07!2;CL:0000954!8.27e-07!2;CL:0000816!8.27e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.03e-115;24!CL:0000236;9.27e-58;13!CL:0000542;3.68e-37;53!CL:0000784;2.90e-21;3!CL:0000946;8.51e-08;1!CL:0000786;8.51e-08;1!CL:0002087;9.13e-08;104!CL:0000738;1.16e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.28e-115,24;CL:0000826,5.28e-115,24;CL:0000236,9.12e-64,14;CL:0000542,4.58e-60,53;CL:0000051,4.58e-60,53;CL:0000838,6.12e-56,52;CL:0000738,9.76e-30,136;CL:0002087,1.32e-27,115;CL:0000037,3.30e-25,168;CL:0002031,6.44e-24,120;CL:0000988,1.11e-23,177;CL:0002032,3.49e-22,161;CL:0000837,3.49e-22,161;CL:0000784,2.90e-21,3;CL:0000134,2.64e-09,354;CL:0002320,5.06e-09,361;CL:0000219,5.00e-08,386;CL:0000946,9.10e-08,1;CL:0000786,9.10e-08,1;CL:0000980,9.10e-08,1;CL:0000034,3.45e-07,441;CL:0000048,8.27e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000051;3.68e-37;53 | |||
|ontology_enrichment_disease=DOID:0060058!7.17e-14!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.03e-16;10!DOID:630;8.51e-08;1!DOID:0050177;8.51e-08;1!DOID:0050427;8.51e-08;1!DOID:12603;1.26e-07;1!DOID:2355;1.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.98e-16,10;DOID:630,6.97e-08,1;DOID:0050177,6.97e-08,1;DOID:0050427,6.97e-08,1;DOID:2355,1.11e-07,1;DOID:12603,1.26e-07,1;DOID:2531,6.08e-07,51;DOID:0060083,6.08e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.43e-10!7;UBERON:0002106!1.04e-09!3;UBERON:0004854!1.04e-09!3;UBERON:0009034!1.04e-09!3;UBERON:0002095!1.04e-09!3;UBERON:0004782!1.04e-09!3;UBERON:0003281!1.04e-09!3;UBERON:0009664!1.04e-09!3;UBERON:0002296!1.04e-09!3;UBERON:0005602!1.04e-09!3;UBERON:0001179!1.04e-09!3;UBERON:0006293!1.04e-09!3 | |ontology_enrichment_uberon=UBERON:0004177!3.43e-10!7;UBERON:0002106!1.04e-09!3;UBERON:0004854!1.04e-09!3;UBERON:0009034!1.04e-09!3;UBERON:0002095!1.04e-09!3;UBERON:0004782!1.04e-09!3;UBERON:0003281!1.04e-09!3;UBERON:0009664!1.04e-09!3;UBERON:0002296!1.04e-09!3;UBERON:0005602!1.04e-09!3;UBERON:0001179!1.04e-09!3;UBERON:0006293!1.04e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.21e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.21e-09,3;UBERON:0004854,1.21e-09,3;UBERON:0009034,1.21e-09,3;UBERON:0002095,1.21e-09,3;UBERON:0004782,1.21e-09,3;UBERON:0003281,1.21e-09,3;UBERON:0009664,1.21e-09,3;UBERON:0002296,1.21e-09,3;UBERON:0005602,1.21e-09,3;UBERON:0001179,1.21e-09,3;UBERON:0006293,1.21e-09,3;UBERON:0002384,1.23e-08,371 | |||
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| ||
|short_description=p3@IRF8 | |short_description=p3@IRF8 | ||
}} | }} |
Latest revision as of 06:14, 18 September 2015
Short description: | p3@IRF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRF8_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 221bp_to_uc002fji.2_5end |
EntrezGene: | IRF8 |
HGNC: | 5358 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.28e-115 | 24 |
pro-B cell | 5.28e-115 | 24 |
B cell | 9.12e-64 | 14 |
lymphocyte | 4.58e-60 | 53 |
common lymphoid progenitor | 4.58e-60 | 53 |
lymphoid lineage restricted progenitor cell | 6.12e-56 | 52 |
leukocyte | 9.76e-30 | 136 |
nongranular leukocyte | 1.32e-27 | 115 |
hematopoietic stem cell | 3.30e-25 | 168 |
hematopoietic lineage restricted progenitor cell | 6.44e-24 | 120 |
hematopoietic cell | 1.11e-23 | 177 |
hematopoietic oligopotent progenitor cell | 3.49e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.49e-22 | 161 |
plasmacytoid dendritic cell | 2.90e-21 | 3 |
mesenchymal cell | 2.64e-09 | 354 |
connective tissue cell | 5.06e-09 | 361 |
motile cell | 5.00e-08 | 386 |
antibody secreting cell | 9.10e-08 | 1 |
plasma cell | 9.10e-08 | 1 |
plasmablast | 9.10e-08 | 1 |
stem cell | 3.45e-07 | 441 |
multi fate stem cell | 8.27e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.21e-09 | 3 |
gastrointestinal system mesentery | 1.21e-09 | 3 |
stomach region | 1.21e-09 | 3 |
mesentery | 1.21e-09 | 3 |
gastrointestinal system serosa | 1.21e-09 | 3 |
mesentery of stomach | 1.21e-09 | 3 |
gut mesentery | 1.21e-09 | 3 |
dorsal mesentery | 1.21e-09 | 3 |
dorsal mesogastrium | 1.21e-09 | 3 |
peritoneal cavity | 1.21e-09 | 3 |
spleen primordium | 1.21e-09 | 3 |
connective tissue | 1.23e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.98e-16 | 10 |
genetic disease | 6.97e-08 | 1 |
monogenic disease | 6.97e-08 | 1 |
xeroderma pigmentosum | 6.97e-08 | 1 |
anemia | 1.11e-07 | 1 |
acute leukemia | 1.26e-07 | 1 |
hematologic cancer | 6.08e-07 | 51 |
immune system cancer | 6.08e-07 | 51 |