FFCP PHASE1:Hg19::chr19:42071221..42071236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90273 | |EntrezGene=90273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28834 | |HGNC=28834 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=185bp_to_uc002ord.1_5end | |association_with_transcript=185bp_to_uc002ord.1_5end | ||
|cluster_id=chr19:42071221..42071236,+ | |||
|coexpression_cluster_id=C3796 | |coexpression_cluster_id=C3796 | ||
|description=CAGE_peak_9_at_CEACAM21_5end | |description=CAGE_peak_9_at_CEACAM21_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.66e-11;5 | |ontology_enrichment_celltype_v019=CL:0000333;2.66e-11;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;4.27e-21;22!DOID:2994;4.27e-21;22!DOID:171;6.99e-21;10!DOID:169;1.22e-09;6 | |ontology_enrichment_disease_v019=DOID:3095;4.27e-21;22!DOID:2994;4.27e-21;22!DOID:171;6.99e-21;10!DOID:169;1.22e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,4.27e-21,22;DOID:2994,4.27e-21,22;DOID:171,6.99e-21,10;DOID:169,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002240!7.01e-16!3;UBERON:0007023!6.56e-14!115;UBERON:0003076!1.88e-11!15;UBERON:0003057!1.88e-11!15;UBERON:0001049!1.98e-11!57;UBERON:0005068!1.98e-11!57;UBERON:0006241!1.98e-11!57;UBERON:0007135!1.98e-11!57;UBERON:0005174!1.02e-09!5;UBERON:0001137!1.02e-09!5;UBERON:0000349!1.62e-09!5;UBERON:0002346!6.97e-09!90;UBERON:0006947!1.14e-07!3;UBERON:0004054!1.14e-07!3;UBERON:0002020!1.36e-07!34;UBERON:0003528!1.36e-07!34;UBERON:0003135!1.60e-07!11;UBERON:0001896!2.13e-07!3;UBERON:0005290!2.13e-07!3;UBERON:0010096!2.13e-07!3;UBERON:0001017!4.28e-07!82;UBERON:0000073!6.29e-07!94;UBERON:0001016!6.29e-07!94;UBERON:0003075!9.16e-07!86;UBERON:0007284!9.16e-07!86 | |ontology_enrichment_uberon=UBERON:0002240!7.01e-16!3;UBERON:0007023!6.56e-14!115;UBERON:0003076!1.88e-11!15;UBERON:0003057!1.88e-11!15;UBERON:0001049!1.98e-11!57;UBERON:0005068!1.98e-11!57;UBERON:0006241!1.98e-11!57;UBERON:0007135!1.98e-11!57;UBERON:0005174!1.02e-09!5;UBERON:0001137!1.02e-09!5;UBERON:0000349!1.62e-09!5;UBERON:0002346!6.97e-09!90;UBERON:0006947!1.14e-07!3;UBERON:0004054!1.14e-07!3;UBERON:0002020!1.36e-07!34;UBERON:0003528!1.36e-07!34;UBERON:0003135!1.60e-07!11;UBERON:0001896!2.13e-07!3;UBERON:0005290!2.13e-07!3;UBERON:0010096!2.13e-07!3;UBERON:0001017!4.28e-07!82;UBERON:0000073!6.29e-07!94;UBERON:0001016!6.29e-07!94;UBERON:0003075!9.16e-07!86;UBERON:0007284!9.16e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.00e-13;4!UBERON:0000923;1.00e-13;4!UBERON:0010316;1.00e-13;4!UBERON:0005291;1.00e-13;4!UBERON:0000013;2.66e-11;5!UBERON:0002410;2.66e-11;5!UBERON:0002050;2.94e-11;5!UBERON:0005423;2.94e-11;5!UBERON:0000010;7.48e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0002346;1.00e-13;4!UBERON:0000923;1.00e-13;4!UBERON:0010316;1.00e-13;4!UBERON:0005291;1.00e-13;4!UBERON:0000013;2.66e-11;5!UBERON:0002410;2.66e-11;5!UBERON:0002050;2.94e-11;5!UBERON:0005423;2.94e-11;5!UBERON:0000010;7.48e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.66e-11,5;UBERON:0002410,2.66e-11,5;UBERON:0000010,7.48e-07,8 | |||
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|short_description=p9@CEACAM21 | |short_description=p9@CEACAM21 | ||
}} | }} |
Latest revision as of 06:08, 18 September 2015
Short description: | p9@CEACAM21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CEACAM21_5end |
Coexpression cluster: | C3796_neuroectodermal_neuroblastoma_rhabdomyosarcoma_cholangiocellular_hereditary_glioma_mesenchymal |
Association with transcript: | 185bp_to_uc002ord.1_5end |
EntrezGene: | CEACAM21 |
HGNC: | 28834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.66e-11 | 5 |
autonomic nervous system | 2.66e-11 | 5 |
peripheral nervous system | 7.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.27e-21 | 22 |
germ cell cancer | 4.27e-21 | 22 |
neuroectodermal tumor | 6.99e-21 | 10 |
neuroendocrine tumor | 1.22e-09 | 6 |