FFCP PHASE1:Hg19::chr19:42070987..42071007,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90273 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28834 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENST00000461658,ENST00000482870_5end | |||
|cluster_id=chr19:42070987..42071007,+ | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_5_at_CEACAM21_5end | |||
|id=chr19:42070987..42071007,+ | |||
|ontology_enrichment_celltype=CL:0000842!1.51e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000037;1.34e-15;1!CL:0001024;1.34e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.34e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.15e-15;1!UBERON:0007297;1.73e-08;2!UBERON:0010122;2.48e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.00e-13;10!DOID:3095;7.39e-11;22!DOID:2994;7.39e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.00e-13,10;DOID:3095,7.39e-11,22;DOID:2994,7.39e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.76e-28!57;UBERON:0005068!6.76e-28!57;UBERON:0006241!6.76e-28!57;UBERON:0007135!6.76e-28!57;UBERON:0007023!1.20e-27!115;UBERON:0002020!3.77e-23!34;UBERON:0003528!3.77e-23!34;UBERON:0002616!1.75e-22!59;UBERON:0002791!3.76e-21!33;UBERON:0001893!2.15e-20!34;UBERON:0002780!3.64e-20!41;UBERON:0001890!3.64e-20!41;UBERON:0006240!3.64e-20!41;UBERON:0002308!5.65e-20!9;UBERON:0000125!5.65e-20!9;UBERON:0003080!1.47e-19!42;UBERON:0002346!4.32e-19!90;UBERON:0000955!8.08e-18!69;UBERON:0006238!8.08e-18!69;UBERON:0001869!1.52e-17!32;UBERON:0001017!1.05e-16!82;UBERON:0003075!7.41e-16!86;UBERON:0007284!7.41e-16!86;UBERON:0009663!1.34e-15!7;UBERON:0005743!1.38e-15!86;UBERON:0002420!1.64e-15!9;UBERON:0007245!1.64e-15!9;UBERON:0010009!1.64e-15!9;UBERON:0010011!1.64e-15!9;UBERON:0000454!1.64e-15!9;UBERON:0000073!1.02e-14!94;UBERON:0001016!1.02e-14!94;UBERON:0003056!7.95e-12!61;UBERON:0002619!3.12e-11!22;UBERON:0002298!1.20e-10!8;UBERON:0000369!1.14e-09!4;UBERON:0002435!1.14e-09!4;UBERON:0000204!1.14e-09!4;UBERON:0010082!1.14e-09!4;UBERON:0000956!1.22e-09!25;UBERON:0000203!1.22e-09!25;UBERON:0003076!1.54e-09!15;UBERON:0003057!1.54e-09!15;UBERON:0000033!1.19e-08!123;UBERON:0000988!2.15e-08!3;UBERON:0001950!2.20e-08!20;UBERON:0005383!5.44e-08!3;UBERON:0005382!5.44e-08!3;UBERON:0000153!6.15e-08!129;UBERON:0007811!6.15e-08!129;UBERON:0006331!6.59e-08!3;UBERON:0000924!6.97e-08!173;UBERON:0006601!6.97e-08!173;UBERON:0000349!1.02e-07!5;UBERON:0002771!2.74e-07!3;UBERON:0004733!6.18e-07!12;UBERON:0002028!6.18e-07!12;UBERON:0007277!6.18e-07!12;UBERON:0001871!7.66e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.15e-15;1!UBERON:0006868;1.15e-15;1!UBERON:0002346;1.49e-15;4!UBERON:0000923;1.49e-15;4!UBERON:0010316;1.49e-15;4!UBERON:0005291;1.49e-15;4!UBERON:0006834;2.38e-15;1!UBERON:0002050;1.23e-12;5!UBERON:0005423;1.23e-12;5!UBERON:0001873;2.48e-08;2!UBERON:0001954;2.48e-08;2!UBERON:0003022;2.48e-08;2!UBERON:0002421;2.48e-08;2!UBERON:0002600;2.48e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.16e-15,1;UBERON:0006868,1.16e-15,1;UBERON:0006834,2.06e-15,1;UBERON:0001873,2.00e-08,2;UBERON:0010122,2.00e-08,2;UBERON:0001954,2.15e-08,2;UBERON:0003022,2.15e-08,2;UBERON:0002421,2.15e-08,2;UBERON:0002600,2.15e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,1.14950487990897,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,1.05353633910031,0.393419540227666,0,0,0,0.651844533267181,0.946895611469467,0,0,0,0,0,0,0,0,0,0,0.444859689486181,0.535081656179426,1.04535523804977,0,0,0,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0.383959833463255,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.241192877250816,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0411260693014,0,0,16.7934186880329,33.4626563499306,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0.747667062745149,0.0657727735628491,0,0,0.470958557103084,0.157115589916002,0,0.913158720509496,0,0,0,0,0,6.7804726198006,0,0,0,0,0,0,0,5.50403165248208,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0.594092800654172,0,0,0,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,14.8237246183381,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0.342233301085281,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,1.34465588601153,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p5@CEACAM21 | |||
}} |
Latest revision as of 06:08, 18 September 2015
Short description: | p5@CEACAM21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CEACAM21_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -25bp_to_ENST00000461658, ENST00000482870_5end |
EntrezGene: | CEACAM21 |
HGNC: | 28834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.34e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 1.16e-15 | 1 |
seminal fluid secreting gland | 1.16e-15 | 1 |
uterus or analog | 2.06e-15 | 1 |
caudate nucleus | 2.00e-08 | 2 |
future caudate nucleus | 2.00e-08 | 2 |
Ammon's horn | 2.15e-08 | 2 |
lobe parts of cerebral cortex | 2.15e-08 | 2 |
hippocampal formation | 2.15e-08 | 2 |
limbic lobe | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.00e-13 | 10 |
germ cell and embryonal cancer | 7.39e-11 | 22 |
germ cell cancer | 7.39e-11 | 22 |