FFCP PHASE1:Hg19::chr19:42055879..42055892,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90273 | |EntrezGene=90273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28834 | |HGNC=28834 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002orc.1_5end | |association_with_transcript=0bp_to_uc002orc.1_5end | ||
|cluster_id=chr19:42055879..42055892,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_CEACAM21_5end | |description=CAGE_peak_1_at_CEACAM21_5end | ||
|id=chr19:42055879..42055892,+ | |id=chr19:42055879..42055892,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.78e-29!172;CL:0000566!3.78e-29!172;CL:0000542!2.30e-26!53;CL:0000051!2.30e-26!53;CL:0002032!2.56e-26!165;CL:0000837!2.56e-26!165;CL:0000988!8.41e-26!182;CL:0000738!1.09e-25!140;CL:0000838!1.18e-25!52;CL:0002087!1.91e-23!119;CL:0002031!1.19e-20!124;CL:0000791!3.54e-15!18;CL:0000789!3.54e-15!18;CL:0002420!3.54e-15!18;CL:0002419!3.54e-15!18;CL:0000790!3.54e-15!18;CL:0000945!1.13e-14!24;CL:0000826!1.13e-14!24;CL:0000236!3.78e-11!14;CL:0000084!2.66e-10!25;CL:0000827!2.66e-10!25;CL:0000625!7.03e-10!11;CL:0000115!1.35e-09!35;CL:0002139!2.15e-09!24;CL:0000763!6.65e-07!112;CL:0000049!6.65e-07!112 | |ontology_enrichment_celltype=CL:0000037!3.78e-29!172;CL:0000566!3.78e-29!172;CL:0000542!2.30e-26!53;CL:0000051!2.30e-26!53;CL:0002032!2.56e-26!165;CL:0000837!2.56e-26!165;CL:0000988!8.41e-26!182;CL:0000738!1.09e-25!140;CL:0000838!1.18e-25!52;CL:0002087!1.91e-23!119;CL:0002031!1.19e-20!124;CL:0000791!3.54e-15!18;CL:0000789!3.54e-15!18;CL:0002420!3.54e-15!18;CL:0002419!3.54e-15!18;CL:0000790!3.54e-15!18;CL:0000945!1.13e-14!24;CL:0000826!1.13e-14!24;CL:0000236!3.78e-11!14;CL:0000084!2.66e-10!25;CL:0000827!2.66e-10!25;CL:0000625!7.03e-10!11;CL:0000115!1.35e-09!35;CL:0002139!2.15e-09!24;CL:0000763!6.65e-07!112;CL:0000049!6.65e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.92e-19;53!CL:0000791;2.21e-18;18!CL:0000789;2.21e-18;18!CL:0002419;2.21e-18;18!CL:0000945;5.40e-18;24!CL:0000084;2.71e-13;25!CL:0000236;1.26e-12;13!CL:0000625;7.82e-12;11!CL:0000115;2.46e-08;36!CL:0002139;4.16e-08;24!CL:0000624;2.94e-07;6!CL:0002087;9.76e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.62e-33,53;CL:0000051,2.62e-33,53;CL:0000838,2.01e-32,52;CL:0000037,1.64e-21,168;CL:0000738,2.92e-19,136;CL:0000988,6.39e-19,177;CL:0002032,1.41e-18,161;CL:0000837,1.41e-18,161;CL:0002087,1.89e-18,115;CL:0000791,2.25e-18,18;CL:0000789,2.25e-18,18;CL:0002420,2.25e-18,18;CL:0002419,2.25e-18,18;CL:0000790,2.25e-18,18;CL:0000945,6.05e-18,24;CL:0000826,6.05e-18,24;CL:0002031,5.74e-14,120;CL:0000236,2.13e-13,14;CL:0000084,3.87e-13,25;CL:0000827,3.87e-13,25;CL:0000625,7.84e-12,11;CL:0000115,1.06e-09,36;CL:0002139,3.59e-08,24;CL:0000624,2.99e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.92e-19;53!CL:0000790;2.21e-18;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.37e-30!115;UBERON:0001049!6.65e-11!57;UBERON:0005068!6.65e-11!57;UBERON:0006241!6.65e-11!57;UBERON:0007135!6.65e-11!57;UBERON:0003080!1.35e-09!42;UBERON:0002780!2.73e-09!41;UBERON:0001890!2.73e-09!41;UBERON:0006240!2.73e-09!41;UBERON:0002193!3.38e-09!112;UBERON:0002616!4.54e-08!59;UBERON:0002020!6.32e-08!34;UBERON:0003528!6.32e-08!34;UBERON:0001893!7.81e-08!34;UBERON:0002791!1.24e-07!33;UBERON:0001869!3.92e-07!32;UBERON:0000178!4.16e-07!15;UBERON:0000179!4.16e-07!15;UBERON:0000463!4.16e-07!15;UBERON:0002390!5.33e-07!102;UBERON:0003061!5.33e-07!102 | |ontology_enrichment_uberon=UBERON:0007023!6.37e-30!115;UBERON:0001049!6.65e-11!57;UBERON:0005068!6.65e-11!57;UBERON:0006241!6.65e-11!57;UBERON:0007135!6.65e-11!57;UBERON:0003080!1.35e-09!42;UBERON:0002780!2.73e-09!41;UBERON:0001890!2.73e-09!41;UBERON:0006240!2.73e-09!41;UBERON:0002193!3.38e-09!112;UBERON:0002616!4.54e-08!59;UBERON:0002020!6.32e-08!34;UBERON:0003528!6.32e-08!34;UBERON:0001893!7.81e-08!34;UBERON:0002791!1.24e-07!33;UBERON:0001869!3.92e-07!32;UBERON:0000178!4.16e-07!15;UBERON:0000179!4.16e-07!15;UBERON:0000463!4.16e-07!15;UBERON:0002390!5.33e-07!102;UBERON:0003061!5.33e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.60e-09;15!UBERON:0000179;6.60e-09;15!UBERON:0000463;6.60e-09;15!UBERON:0002193;2.75e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.38e-23,114;UBERON:0000178,6.71e-09,15;UBERON:0000179,6.71e-09,15;UBERON:0000463,6.71e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9770275265984,10.590976039043,13.3021220420118,9.8341069212226,42.2212337906934,7.43117391917165,0,0,0,3.09868802321207,2.13253848731132,14.3864215274075,13.8498852132969,9.6261334785668,14.5397283379621,4.25439401055856,17.1663642990059,3.8636335145128,0,2.26725566213286,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,1.2808035326455,0.47296445977717,1.03423704220986,0.645484683583826,0,0.752969358170419,0.545812300115692,0.224723484445085,0.612167784741805,0.962787081228281,0,0.659702600373432,0.997318288108159,0,0.290209238628584,0,0,0.75374599577023,1.5644487552606,0.434377689410233,1.81619850790011,0.368277635987565,1.26584954976354,0.211255286311942,0,0.209658645508376,0.112328631146495,0.750884464207532,0.48217676009124,0,0,0,51.0389108937836,72.0902966866013,67.6027032936302,36.6987991407196,69.6689017442662,61.4985110751297,72.7149360063348,63.9216015538694,31.8759262701291,17.6171156811282,21.4073007750128,5.28685314316103,17.3757654524276,14.4861246626292,58.0293821835808,33.7989255964282,52.2227807458753,124.052379579883,131.672595719971,139.667102691746,101.309898772114,94.2532465248568,104.290491246092,121.400574231824,140.005597566513,81.4660793455294,83.8882791761215,101.787062949676,89.261055744829,119.688674408577,151.400580988464,148.75270041788,103.490168566927,111.7230118998,83.1588471116169,73.1926458878002,102.219955575879,68.8101294940049,97.6625180784628,70.3334512891797,68.6622542994644,110.0684855928,62.4653632761729,80.7410429470098,50.9099358091049,68.546292696409,45.1973930874127,45.0403896075505,0,0,0.255725123687061,0,0,0,0,0,0,0,0.263504357079378,4.71524671791765,0,0,2.59637914923747,2.08955684759121,1.86141144726411,35.7735936458013,14.2998727695032,27.8593125997174,3.57772333260069,1.72046919021225,1.38856200643038,0.56530794192401,2.09749718104953,0.825354125820202,0.626984899610432,15.5050055501597,16.3652480835887,18.0749130892922,28.6008815147494,7.60272105718513,32.2161915963584,9.19157700864672,0.81014194788176,6.25098097988558,3.59246996201872,3.49095589498299,0,1.89853131913626,1.46561395144326,2.63560834872127,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,5.16708818237254,1.40241773803446,0,0,1.26755034821831,5.89696330006576,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,16.6021414925235,6.01881166349594,10.6542325251375,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,1.4512968087854,0.288239906833923,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,58.2842748766342,69.5518583512803,50.8881076668461,42.866574117436,0,0,0,0.335032530668698,0,0.749007023947182,0,2.07207756718018,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,47.763414034387,32.1414159219739,23.4800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4120015221269,2.72149928442425,3.67057057373637,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,2.7821073144885,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,3.29503302718727,0,0,0,0,54.2968941878421,77.2283579213799,47.2807165354555,98.8661868149824,97.492858721428,71.9805375423916,64.8037724685738,42.8287595198906,0.213648142254946,0,0,48.6804318829383,39.9625719944752,0,0,12.1743416574018,35.0454827342231,18.4156016969778,4.22008522356922,5.89674074038263,18.2587743226554,0,15.038068625404,3.55512733383367,6.58411107925168,0.80719882876419,1.70338495076131,0,0.307240764308458,0.447352215784832,0,0.781552381608161,0,0,0.270455678475983,5.32915148796512,0,0,1.75809815126273,0,0,0,0,0,0,8.94732882989668,1.82870241333667,0,0,0,6.17668763578316,29.0098111307705,0,0,10.8314628805741,0,0,0,1.02314474045374,4.73488347057281,38.3172947755104,0,0,1.76259386507517,0,0,0,2.17499872630438,0,0,0,0,0.583209226766509,0,4.42870692906919,1.32656082487949,0,0.552896299656123,0.591095237907095,0.658156191461918,0,0,2.30850775511391,0,0,0,0,1.27600463892768,0.183195186803725,1.5991043280559,1.02193298195737,17.1108479470577,0,0,0,0,0,1.11255605286265,0,0,0,0,2.98578579323551,6.01511438622706,6.72133159426988,0,0,0,3.37005664903385,0.802577647298789,1.40558667435203,14.9612927156846,0.19566461893209,0,0.789168805698781,13.308978765353,0,8.9093077276168,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.93978032976839,0,0.677942222341597,0,0,1.96263467463224,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,2.46429682005587,3.83239764200917,0,0,0.837847203816763,0,0,0.998395002494955,0,0.446342914883745,0.873385142327441,0,0,0,0,0,0,34.2926994866427,5.56660782866512,2.04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| ||
|short_description=p1@CEACAM21 | |short_description=p1@CEACAM21 | ||
}} | }} |
Latest revision as of 06:01, 18 September 2015
Short description: | p1@CEACAM21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEACAM21_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc002orc.1_5end |
EntrezGene: | CEACAM21 |
HGNC: | 28834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.62e-33 | 53 |
common lymphoid progenitor | 2.62e-33 | 53 |
lymphoid lineage restricted progenitor cell | 2.01e-32 | 52 |
hematopoietic stem cell | 1.64e-21 | 168 |
leukocyte | 2.92e-19 | 136 |
hematopoietic cell | 6.39e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.41e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-18 | 161 |
nongranular leukocyte | 1.89e-18 | 115 |
mature alpha-beta T cell | 2.25e-18 | 18 |
alpha-beta T cell | 2.25e-18 | 18 |
immature T cell | 2.25e-18 | 18 |
mature T cell | 2.25e-18 | 18 |
immature alpha-beta T cell | 2.25e-18 | 18 |
lymphocyte of B lineage | 6.05e-18 | 24 |
pro-B cell | 6.05e-18 | 24 |
hematopoietic lineage restricted progenitor cell | 5.74e-14 | 120 |
B cell | 2.13e-13 | 14 |
T cell | 3.87e-13 | 25 |
pro-T cell | 3.87e-13 | 25 |
CD8-positive, alpha-beta T cell | 7.84e-12 | 11 |
endothelial cell | 1.06e-09 | 36 |
endothelial cell of vascular tree | 3.59e-08 | 24 |
CD4-positive, alpha-beta T cell | 2.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.38e-23 | 114 |
blood | 6.71e-09 | 15 |
haemolymphatic fluid | 6.71e-09 | 15 |
organism substance | 6.71e-09 | 15 |