FFCP PHASE1:Hg19::chr11:47521309..47521319,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10658 | |EntrezGene=10658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2549 | |HGNC=2549 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0D8 | |UniProt=F5H0D8 | ||
|association_with_transcript=0bp_to_ENST00000535982_5end | |association_with_transcript=0bp_to_ENST00000535982_5end | ||
|cluster_id=chr11:47521309..47521319,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_38_at_CELF1_5end | |description=CAGE_peak_38_at_CELF1_5end | ||
|id=chr11:47521309..47521319,- | |id=chr11:47521309..47521319,- | ||
|ontology_enrichment_celltype=CL:0002194!7.97e-15!63;CL:0000576!7.97e-15!63;CL:0000040!7.97e-15!63;CL:0000559!7.97e-15!63;CL:0002009!3.51e-14!65;CL:0000839!9.76e-13!70;CL:0000557!1.79e-12!71;CL:0000766!2.92e-11!76;CL:0002619!7.03e-09!3;CL:0002057!2.59e-08!42;CL:0002087!5.50e-08!119;CL:0000860!1.54e-07!45;CL:0002031!2.09e-07!124 | |ontology_enrichment_celltype=CL:0002194!7.97e-15!63;CL:0000576!7.97e-15!63;CL:0000040!7.97e-15!63;CL:0000559!7.97e-15!63;CL:0002009!3.51e-14!65;CL:0000839!9.76e-13!70;CL:0000557!1.79e-12!71;CL:0000766!2.92e-11!76;CL:0002619!7.03e-09!3;CL:0002057!2.59e-08!42;CL:0002087!5.50e-08!119;CL:0000860!1.54e-07!45;CL:0002031!2.09e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0002619;8.30e-19;3!CL:0000235;7.59e-10;6!CL:0000473;1.25e-09;39!CL:0000234;1.25e-09;39!CL:0000576;1.62e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,8.69e-19,3;CL:0002194,2.35e-13,59;CL:0000576,2.35e-13,59;CL:0000040,2.35e-13,59;CL:0000559,2.35e-13,59;CL:0002009,6.70e-13,61;CL:0000839,7.00e-12,66;CL:0000557,1.07e-11,67;CL:0000766,7.67e-11,72;CL:0000235,8.11e-10,6;CL:0000473,1.33e-09,48;CL:0000234,1.33e-09,48;CL:0000763,5.39e-07,108;CL:0000049,5.39e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.02e-14!115;UBERON:0007023!2.08e-14!115;UBERON:0002390!2.46e-12!102;UBERON:0003061!2.46e-12!102;UBERON:0002371!1.38e-11!80;UBERON:0002193!1.86e-11!112;UBERON:0001474!2.39e-10!86;UBERON:0004765!9.15e-09!101;UBERON:0001434!9.15e-09!101;UBERON:0000062!1.50e-07!511 | |ontology_enrichment_uberon=UBERON:0002405!2.02e-14!115;UBERON:0007023!2.08e-14!115;UBERON:0002390!2.46e-12!102;UBERON:0003061!2.46e-12!102;UBERON:0002371!1.38e-11!80;UBERON:0002193!1.86e-11!112;UBERON:0001474!2.39e-10!86;UBERON:0004765!9.15e-09!101;UBERON:0001434!9.15e-09!101;UBERON:0000062!1.50e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.63e-07;19!UBERON:0006925;5.63e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.08e-10,76;UBERON:0001474,1.93e-09,82;UBERON:0004765,1.53e-08,90;UBERON:0002405,3.05e-08,93;UBERON:0002390,8.74e-08,98;UBERON:0003061,8.74e-08,98;UBERON:0001434,1.29e-07,100;UBERON:0002193,5.39e-07,108;UBERON:0002107,5.41e-07,19;UBERON:0006925,5.41e-07,19;UBERON:0008836,5.41e-07,19 | |||
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| ||
|short_description=p38@CELF1 | |short_description=p38@CELF1 | ||
}} | }} |
Latest revision as of 05:40, 18 September 2015
Short description: | p38@CELF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_CELF1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000535982_5end |
EntrezGene: | CELF1 |
HGNC: | 2549 |
UniProt: | F5H0D8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 8.69e-19 | 3 |
monopoietic cell | 2.35e-13 | 59 |
monocyte | 2.35e-13 | 59 |
monoblast | 2.35e-13 | 59 |
promonocyte | 2.35e-13 | 59 |
macrophage dendritic cell progenitor | 6.70e-13 | 61 |
myeloid lineage restricted progenitor cell | 7.00e-12 | 66 |
granulocyte monocyte progenitor cell | 1.07e-11 | 67 |
myeloid leukocyte | 7.67e-11 | 72 |
macrophage | 8.11e-10 | 6 |
defensive cell | 1.33e-09 | 48 |
phagocyte | 1.33e-09 | 48 |
myeloid cell | 5.39e-07 | 108 |
common myeloid progenitor | 5.39e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.08e-10 | 76 |
bone element | 1.93e-09 | 82 |
skeletal element | 1.53e-08 | 90 |
immune system | 3.05e-08 | 93 |
hematopoietic system | 8.74e-08 | 98 |
blood island | 8.74e-08 | 98 |
skeletal system | 1.29e-07 | 100 |
hemolymphoid system | 5.39e-07 | 108 |
liver | 5.41e-07 | 19 |
digestive gland | 5.41e-07 | 19 |
liver bud | 5.41e-07 | 19 |