FFCP PHASE1:Hg19::chr10:43633914..43633935,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55454 | |EntrezGene=55454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24292 | |HGNC=24292 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6G5 | |UniProt=Q8N6G5 | ||
|association_with_transcript=0bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | |association_with_transcript=0bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | ||
|cluster_id=chr10:43633914..43633935,+ | |||
|coexpression_cluster_id=C723 | |coexpression_cluster_id=C723 | ||
|description=CAGE_peak_2_at_CSGALNACT2_5end | |description=CAGE_peak_2_at_CSGALNACT2_5end | ||
|id=chr10:43633914..43633935,+ | |id=chr10:43633914..43633935,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.67e-36!140;CL:0000766!3.80e-30!76;CL:0002031!2.51e-28!124;CL:0002087!3.81e-27!119;CL:0000037!1.06e-26!172;CL:0000566!1.06e-26!172;CL:0000557!1.98e-26!71;CL:0002057!2.03e-25!42;CL:0002032!4.46e-24!165;CL:0000837!4.46e-24!165;CL:0000839!4.65e-24!70;CL:0000988!5.76e-24!182;CL:0002009!1.27e-23!65;CL:0002194!1.36e-22!63;CL:0000576!1.36e-22!63;CL:0000040!1.36e-22!63;CL:0000559!1.36e-22!63;CL:0000860!4.31e-21!45;CL:0000134!2.12e-19!358;CL:0002320!4.35e-19!365;CL:0000763!9.30e-19!112;CL:0000049!9.30e-19!112;CL:0000048!1.72e-18!430;CL:0000723!1.78e-17!436;CL:0000034!6.80e-17!444;CL:0000219!1.48e-15!390;CL:0000791!1.03e-08!18;CL:0000789!1.03e-08!18;CL:0002420!1.03e-08!18;CL:0002419!1.03e-08!18;CL:0000790!1.03e-08!18;CL:0000084!1.21e-07!25;CL:0000827!1.21e-07!25;CL:0000094!7.45e-07!8;CL:0002393!7.64e-07!9;CL:0002397!7.64e-07!9 | |ontology_enrichment_celltype=CL:0000738!2.67e-36!140;CL:0000766!3.80e-30!76;CL:0002031!2.51e-28!124;CL:0002087!3.81e-27!119;CL:0000037!1.06e-26!172;CL:0000566!1.06e-26!172;CL:0000557!1.98e-26!71;CL:0002057!2.03e-25!42;CL:0002032!4.46e-24!165;CL:0000837!4.46e-24!165;CL:0000839!4.65e-24!70;CL:0000988!5.76e-24!182;CL:0002009!1.27e-23!65;CL:0002194!1.36e-22!63;CL:0000576!1.36e-22!63;CL:0000040!1.36e-22!63;CL:0000559!1.36e-22!63;CL:0000860!4.31e-21!45;CL:0000134!2.12e-19!358;CL:0002320!4.35e-19!365;CL:0000763!9.30e-19!112;CL:0000049!9.30e-19!112;CL:0000048!1.72e-18!430;CL:0000723!1.78e-17!436;CL:0000034!6.80e-17!444;CL:0000219!1.48e-15!390;CL:0000791!1.03e-08!18;CL:0000789!1.03e-08!18;CL:0002420!1.03e-08!18;CL:0002419!1.03e-08!18;CL:0000790!1.03e-08!18;CL:0000084!1.21e-07!25;CL:0000827!1.21e-07!25;CL:0000094!7.45e-07!8;CL:0002393!7.64e-07!9;CL:0002397!7.64e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.94e-18;33!CL:0002057;1.94e-18;33!CL:0000473;1.45e-17;39!CL:0000234;1.45e-17;39!CL:0000576;3.27e-15;48!CL:0000766;1.16e-14;69!CL:0002087;6.19e-09;104!CL:0000791;8.30e-09;18!CL:0000789;8.30e-09;18!CL:0002419;8.30e-09;18!CL:0000738;1.70e-08;136!CL:0000084;1.21e-07;25!CL:0000094;6.63e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.89e-39,136;CL:0000766,1.47e-33,72;CL:0002031,1.34e-30,120;CL:0000557,1.09e-29,67;CL:0002087,2.05e-29,115;CL:0000037,2.06e-28,168;CL:0000473,7.93e-28,48;CL:0000234,7.93e-28,48;CL:0000839,3.94e-27,66;CL:0002009,7.86e-27,61;CL:0000988,5.75e-26,177;CL:0002194,8.99e-26,59;CL:0000576,8.99e-26,59;CL:0000040,8.99e-26,59;CL:0000559,8.99e-26,59;CL:0002032,1.03e-25,161;CL:0000837,1.03e-25,161;CL:0000860,1.98e-25,42;CL:0002057,1.98e-25,42;CL:0000134,5.83e-21,354;CL:0002320,1.27e-20,361;CL:0000763,1.50e-20,108;CL:0000049,1.50e-20,108;CL:0000048,4.53e-20,427;CL:0000723,4.99e-19,433;CL:0000034,2.15e-18,441;CL:0000219,7.12e-17,386;CL:0000791,1.02e-08,18;CL:0000789,1.02e-08,18;CL:0002420,1.02e-08,18;CL:0002419,1.02e-08,18;CL:0000790,1.02e-08,18;CL:0000084,1.20e-07,25;CL:0000827,1.20e-07,25;CL:0000094,7.41e-07,8;CL:0002393,7.60e-07,9;CL:0002397,7.60e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.00e-18;42!CL:0000790;8.30e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.66e-31!102;UBERON:0003061!3.66e-31!102;UBERON:0002193!1.37e-27!112;UBERON:0002371!2.18e-25!80;UBERON:0001474!1.22e-24!86;UBERON:0004765!1.09e-21!101;UBERON:0001434!1.09e-21!101;UBERON:0002384!1.17e-18!375;UBERON:0002204!6.63e-16!167;UBERON:0002405!5.54e-15!115;UBERON:0003081!6.92e-09!216 | |ontology_enrichment_uberon=UBERON:0002390!3.66e-31!102;UBERON:0003061!3.66e-31!102;UBERON:0002193!1.37e-27!112;UBERON:0002371!2.18e-25!80;UBERON:0001474!1.22e-24!86;UBERON:0004765!1.09e-21!101;UBERON:0001434!1.09e-21!101;UBERON:0002384!1.17e-18!375;UBERON:0002204!6.63e-16!167;UBERON:0002405!5.54e-15!115;UBERON:0003081!6.92e-09!216 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@CSGALNACT2 | |short_description=p2@CSGALNACT2 | ||
}} | }} |
Latest revision as of 05:39, 18 September 2015
Short description: | p2@CSGALNACT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSGALNACT2_5end |
Coexpression cluster: | C723_CD14_CD4_Eosinophils_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 0bp_to_ENST00000374464, ENST00000374466, NM_018590, uc001jam.1, uc001jan.2_5end |
EntrezGene: | CSGALNACT2 |
HGNC: | 24292 |
UniProt: | Q8N6G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.81e-34 | 98 |
blood island | 5.81e-34 | 98 |
hemolymphoid system | 5.49e-30 | 108 |
bone marrow | 2.81e-28 | 76 |
bone element | 2.57e-27 | 82 |
skeletal element | 4.88e-26 | 90 |
immune system | 5.10e-25 | 93 |
skeletal system | 1.10e-23 | 100 |
connective tissue | 3.64e-20 | 371 |
musculoskeletal system | 2.74e-17 | 167 |
lateral plate mesoderm | 4.70e-12 | 203 |
mesoderm | 5.65e-08 | 315 |
mesoderm-derived structure | 5.65e-08 | 315 |
presumptive mesoderm | 5.65e-08 | 315 |