FFCP PHASE1:Hg19::chr6:33037447..33037514,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3113 | |EntrezGene=3113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4938 | |HGNC=4938 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-422bp_to_ENST00000437811_5end | |association_with_transcript=-422bp_to_ENST00000437811_5end | ||
|cluster_id=chr6:33037447..33037514,- | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_3_at_HLA-DPA1_5end | |description=CAGE_peak_3_at_HLA-DPA1_5end | ||
|id=chr6:33037447..33037514,- | |id=chr6:33037447..33037514,- | ||
|ontology_enrichment_celltype=CL:0000738!4.15e-57!140;CL:0002087!3.37e-55!119;CL:0002031!3.26e-52!124;CL:0000037!6.45e-47!172;CL:0000566!6.45e-47!172;CL:0000988!8.38e-44!182;CL:0002032!1.46e-43!165;CL:0000837!1.46e-43!165;CL:0002009!1.18e-39!65;CL:0002194!1.03e-37!63;CL:0000576!1.03e-37!63;CL:0000040!1.03e-37!63;CL:0000559!1.03e-37!63;CL:0002057!1.65e-36!42;CL:0000557!1.75e-36!71;CL:0000839!8.10e-35!70;CL:0000766!5.26e-33!76;CL:0000860!1.06e-32!45;CL:0000763!2.24e-26!112;CL:0000049!2.24e-26!112;CL:0000945!1.02e-16!24;CL:0000826!1.02e-16!24;CL:0000542!2.30e-15!53;CL:0000051!2.30e-15!53;CL:0000838!5.95e-15!52;CL:0000236!7.92e-12!14;CL:0000451!5.16e-11!10;CL:0000134!3.64e-10!358;CL:0000990!4.88e-10!8;CL:0002320!2.94e-09!365;CL:0002393!6.81e-09!9;CL:0002397!6.81e-09!9;CL:0000840!3.75e-07!5;CL:0001029!3.75e-07!5;CL:0000219!5.83e-07!390 | |ontology_enrichment_celltype=CL:0000738!4.15e-57!140;CL:0002087!3.37e-55!119;CL:0002031!3.26e-52!124;CL:0000037!6.45e-47!172;CL:0000566!6.45e-47!172;CL:0000988!8.38e-44!182;CL:0002032!1.46e-43!165;CL:0000837!1.46e-43!165;CL:0002009!1.18e-39!65;CL:0002194!1.03e-37!63;CL:0000576!1.03e-37!63;CL:0000040!1.03e-37!63;CL:0000559!1.03e-37!63;CL:0002057!1.65e-36!42;CL:0000557!1.75e-36!71;CL:0000839!8.10e-35!70;CL:0000766!5.26e-33!76;CL:0000860!1.06e-32!45;CL:0000763!2.24e-26!112;CL:0000049!2.24e-26!112;CL:0000945!1.02e-16!24;CL:0000826!1.02e-16!24;CL:0000542!2.30e-15!53;CL:0000051!2.30e-15!53;CL:0000838!5.95e-15!52;CL:0000236!7.92e-12!14;CL:0000451!5.16e-11!10;CL:0000134!3.64e-10!358;CL:0000990!4.88e-10!8;CL:0002320!2.94e-09!365;CL:0002393!6.81e-09!9;CL:0002397!6.81e-09!9;CL:0000840!3.75e-07!5;CL:0001029!3.75e-07!5;CL:0000219!5.83e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.79e-43;39!CL:0000234;1.79e-43;39!CL:0000860;2.33e-43;33!CL:0002057;2.33e-43;33!CL:0000576;4.64e-38;48!CL:0000766;2.84e-26;69!CL:0000945;2.58e-20;24!CL:0002087;1.63e-19;104!CL:0000738;2.19e-19;136!CL:0000451;1.96e-17;10!CL:0000236;8.03e-16;13!CL:0000990;8.53e-16;8!CL:0000763;1.59e-12;100!CL:0000840;5.78e-11;5!CL:0000235;2.65e-10;6!CL:0000988;3.33e-10;177!CL:0002393;8.88e-10;6!CL:0002397;8.88e-10;6!CL:0000453;1.05e-09;5!CL:0000542;3.55e-08;53!CL:0000219;8.87e-08;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.19e-78,136;CL:0002087,5.81e-76,115;CL:0002009,1.91e-75,61;CL:0002194,4.84e-72,59;CL:0000576,4.84e-72,59;CL:0000040,4.84e-72,59;CL:0000559,4.84e-72,59;CL:0002031,2.44e-70,120;CL:0000473,1.05e-69,48;CL:0000234,1.05e-69,48;CL:0000557,5.61e-67,67;CL:0000037,1.12e-65,168;CL:0000839,1.91e-62,66;CL:0000988,2.72e-62,177;CL:0000860,1.87e-60,42;CL:0002057,1.87e-60,42;CL:0000766,3.52e-60,72;CL:0002032,4.92e-60,161;CL:0000837,4.92e-60,161;CL:0000763,5.25e-49,108;CL:0000049,5.25e-49,108;CL:0000945,2.18e-20,24;CL:0000826,2.18e-20,24;CL:0000134,1.79e-18,354;CL:0002320,1.38e-17,361;CL:0000451,1.98e-17,10;CL:0000236,5.65e-17,14;CL:0000990,8.63e-16,8;CL:0000219,1.68e-14,386;CL:0002393,7.19e-14,9;CL:0002397,7.19e-14,9;CL:0000048,2.81e-11,427;CL:0000034,4.87e-11,441;CL:0000840,5.88e-11,5;CL:0001029,5.88e-11,5;CL:0000723,9.07e-11,433;CL:0000838,9.10e-11,52;CL:0000542,1.95e-10,53;CL:0000051,1.95e-10,53;CL:0000235,2.57e-10,6;CL:0000453,1.06e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-43;42!CL:0000049;1.11e-14;108!CL:0000051;3.55e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.78e-43!102;UBERON:0003061!3.78e-43!102;UBERON:0002193!1.38e-41!112;UBERON:0002371!8.31e-35!80;UBERON:0001474!2.77e-31!86;UBERON:0002405!3.24e-30!115;UBERON:0004765!4.19e-25!101;UBERON:0001434!4.19e-25!101;UBERON:0007023!2.66e-18!115;UBERON:0003081!2.77e-12!216;UBERON:0002204!5.20e-10!167;UBERON:0002384!1.17e-08!375;UBERON:0000178!9.22e-07!15;UBERON:0000179!9.22e-07!15;UBERON:0000463!9.22e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-62,98;UBERON:0003061,1.66e-62,98;UBERON:0002371,9.99e-59,76;UBERON:0002193,4.40e-58,108;UBERON:0002405,3.99e-53,93;UBERON:0001474,5.24e-53,82;UBERON:0004765,1.42e-46,90;UBERON:0001434,5.45e-40,100;UBERON:0003081,5.51e-25,203;UBERON:0002204,2.21e-17,167;UBERON:0002384,5.99e-17,371;UBERON:0000926,4.74e-10,315;UBERON:0004120,4.74e-10,315;UBERON:0006603,4.74e-10,315 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,3.132949635666,1.55991119954897,1.73163718890094,2.36018566109342,0.383829398097213,2.78669021968937,0,0,0,1.47187681102573,0.284338464974843,1.17440175733939,2.76997704265939,2.4065333696417,4.99125002646459,5.37397138175818,5.50619232232265,4.89393578504954,5.37973483484389,10.5805264232867,6.79235371325885,8.13501629169896,9.45686142450199,7.12324653058738,8.91846416198666,11.2710710872804,9.69577142543199,3.44745680736619,12.2642089880927,1.35426486594342,8.094420600332,9.00590295190891,6.29225756446237,9.18251677112708,11.8743740018155,8.31138263538754,7.91643120448119,15.9570926097305,13.2129672665135,8.12585868160035,7.37600792098482,4.9825779919646,8.79370328398601,10.429658368404,8.03598725408932,6.65939452896706,5.89244217580104,7.91155968602211,28.5194636521121,19.7721998967491,14.6761051855863,3.59451619668784,6.15725260650176,3.05378614724452,4.56020389985998,8.75233379675996,8.21988691940853,3.51992488922645,8.7382177801941,4.44754626931777,6.40095333849761,6.00593980554019,6.32227683949932,5.94940385506376,3.81621501814146,9.10740750575117,20.5533016279829,9.17455747500549,0,1.12101712596307,2.10707267820062,0.196709770113833,0,0.205601498999509,0,0,0,0,0.557052284425868,0,1.32920336750173,1.08321545506006,0.640456598628376,0.390178042679635,0,0,0,0,0,1.04535523804977,0,0,0,0.253019692019503,0.318565414324097,0,0,0.752875595388864,0.383959833463255,0,0.710331756132051,0,0.403213486449465,1.60464117470104,0.724122019413995,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.982343066232845,0,0,24.3410545241012,24.7264226964959,44.0090849317444,4.76981248610684,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,8.8638122191463,3.04205544681009,9.66102554876734,0,0,0,0,0,0,0,0,0.414656231081544,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,13.378615870531,9.04062764577828,14.7583757638122,0,0,0,0,0,0,0.224170287987055,0.788123040807709,0.646882724578552,1.41177339907723,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,5.1771408196468,3.73546452312055,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,1.13345112812495,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.753150406214233,0,0,0,0,0.507447609232169,0,1.70894156152249,1.42939065274673,0.411362273086194,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0,0.743212700502875,0.28853842595289,0,0,0,0.383010740264733,0,0,2.24637742490767,0.228234679033192,0,0,0,0,1.41259795033733,1.27753871307098,1.71752672377882,0,0,0,0.19538809540204,0,0,0,0,0,0,1.02555725490326,0,1.00299045849731,0.568272293612826,0,0,0.307160702099232,0,0.422008249231538,0,1.15362711958732,0,0.996239941255349,3.03912307084262,0,0,1.35393286007176,0,0.0898683511473268,0,0,0.0986434056369336,4.7896618469388,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0.886642856860642,0,0,0,0.769502585037971,0,0,0,0,0,0,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.442287822516696,0,0,1.23563938946503,0.939797545549098,0.471807930864739,0.802577647298789,0,2.00700268137233,0,0,0,0,0,1.95878396848313,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,4.19344003780872,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0.160317640503067,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0.262887354279314,0.558564802544508,0.229160424011684,2.15361907373044,0,0,0.223171457441873,0,0,0,0,0,0,0,0.76205998859206,0,0.272406812223151,0,0,0.415440338029185,13.048485709987,40.2377016370134,0.0607495566580247,0,0.472834243795189,0.0524545881349981,0,0,0,2.85878130549347,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,1.61207457045891,1.32506888912221,0.387848869084652,0.52893040697076,0,0,2.56289790162467,0.314408610199332,7.04206394090232,1.9846640872478,0.197611631897944,2.43585196761792,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,2.29363678276028,0.887432412294818,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,22.4089355165297,19.9297260470045,26.1704630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| ||
|short_description=p3@HLA-DPA1 | |short_description=p3@HLA-DPA1 | ||
}} | }} |
Latest revision as of 05:29, 18 September 2015
Short description: | p3@HLA-DPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HLA-DPA1_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | -422bp_to_ENST00000437811_5end |
EntrezGene: | HLA-DPA1 |
HGNC: | 4938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.66e-62 | 98 |
blood island | 1.66e-62 | 98 |
bone marrow | 9.99e-59 | 76 |
hemolymphoid system | 4.40e-58 | 108 |
immune system | 3.99e-53 | 93 |
bone element | 5.24e-53 | 82 |
skeletal element | 1.42e-46 | 90 |
skeletal system | 5.45e-40 | 100 |
lateral plate mesoderm | 5.51e-25 | 203 |
musculoskeletal system | 2.21e-17 | 167 |
connective tissue | 5.99e-17 | 371 |
mesoderm | 4.74e-10 | 315 |
mesoderm-derived structure | 4.74e-10 | 315 |
presumptive mesoderm | 4.74e-10 | 315 |