FFCP PHASE1:Hg19::chr13:95248391..95248398,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23483 | |EntrezGene=23483 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20324 | |HGNC=20324 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=97bp_to_ENST00000498294_5end | |association_with_transcript=97bp_to_ENST00000498294_5end | ||
|cluster_id=chr13:95248391..95248398,- | |||
|description=CAGE_peak_4_at_TGDS_5end | |description=CAGE_peak_4_at_TGDS_5end | ||
|id=chr13:95248391..95248398,- | |id=chr13:95248391..95248398,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.37e-08;4!CL:0002253;4.25e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.11e-09,4;CL:0002253,2.60e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.33e-09!235;DOID:14566!2.35e-09!239;DOID:0050686!9.83e-08!137;DOID:2531!4.24e-07!51;DOID:0060083!4.24e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.62e-17;10!DOID:1909;1.34e-08;2!DOID:2531;7.36e-07;51!DOID:0060083;7.36e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.54e-16,10;DOID:2531,1.55e-12,51;DOID:0060083,1.55e-12,51;DOID:1909,1.03e-08,2;DOID:0050686,2.40e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.37e-08;4!UBERON:0001262;1.37e-08;4!UBERON:0004786;1.37e-08;4!UBERON:0004808;1.37e-08;4!UBERON:0001277;1.37e-08;4!UBERON:0003929;2.57e-08;7!UBERON:0003714;4.25e-08;2!UBERON:0003350;2.80e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.11e-09,4;UBERON:0001262,5.11e-09,4;UBERON:0004786,5.11e-09,4;UBERON:0004808,5.11e-09,4;UBERON:0001277,5.11e-09,4;UBERON:0003714,4.98e-08,2;UBERON:0003350,1.05e-07,8 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0.313454721478088,0.572471974262113,0.273748850145768,0.251085279189606,0.382067028739756,0.738905305049512,0.472264687882075,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0.232401601740905,1.13735385989937,0.293600439334847,0,0,0,0,0,0.515151135268373,0,0.377875943688809,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0,0,0,1.31692042387539,0.196709770113833,0.393010762749165,0.616804496998528,0.334372990781356,0.651844533267181,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0.493313713811028,0,0,0.296573126324121,1.07016331235885,0,0.226618685395132,0.383220493601921,0,0,0.637130828648193,0,0,0.752875595388864,0.76791966692651,1.24930726552346,0,0.821127996921047,0,0,0.434473211648397,0,0,0.12786256184353,0.722878304769133,0,0.289693037921647,0,0.486634870302636,0.567208902984407,1.55210578223795,0.087834785693126,0.327447688744282,0,0,0.97364218096405,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.714397826272638,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.794455084879313,0,0,0.560677600142307,1.06748995729705,0.74000264525148,0.933633106199299,0.808264032418128,0,0.454072282934794,0,0.468642863667593,0.936480230490962,0,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0.61246251376468,0.491337269247072,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0.336672227908132,1.00094815897571,0,0.438977620880838,0,0,0.567160915800105,0.179389635688862,0.213557388818567,0.635795703478686,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0.506328996723799,0.194874010322397,0.504867548488229,0.368199594569197,0.323292113637624,0,0.10075209822764,0.67824236924195,0,0.545492241181669,1.72082757233402,0.243947412259191,0.265059536642971,0.232387885739037,1.24393266018445,0.756962552626885,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,1.77236972004421,2.6487785964879,0.614942192715568,1.02940686179115,0.109750285408626,1.1240175325762,0.804231779293047,0.370353780634118,0,0,0,0.579652024875384,0.117408694235822,0.433099343283221,0,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0,0.503946384596579,1.41775097242386,0.268675568108545,0.581267877027924,0.383382679165211,3.94130590316755,0.176096868026452,0.414656231081544,0.144119953416961,0.12624243342638,0.761974731506028,0,0,0,0.411309970813294,0.300343057843917,0.571652865261156,0.112131084345361,0,0.1466765716419,0.258543431515556,3.57656445851882,0,0,0,0.257207374262142,0,0,0.428933980974443,1.08524321078289,0,1.62868092146868,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0.895304816199478,0.448340575974109,0.394061520403854,0.646882724578552,0.385029108839245,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0.542530047399471,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.512556597022804,0.511707249066704,0.321707842287215,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0.232420756919918,0.725156697549733,0.200506470303285,0.184161977871793,0.229628896329213,0.182091168006717,0.262248829918848,0.902399225814824,0.462092022626489,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0,1.01950509218015,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0.328014645699706,0.325378394664303,0.515205058238611,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0.462145851343933,0.460511024178389,0.413509717453592,0.429680979473094,0.435050081742686,0.340906509664404,0.0890320356467374,0,0.576570202095319,1.02090169995667,0.10115778085555,0,0.94443704049192,0,0.308033580176089,0,0,0.55597265731176,1.5743737541619,0.372158369359667,0,0.190630193923825,0,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0.48763373908959,0.974853958525138,0,0.409499734223957,0.141405431953713,0,0,0,0.438450885253763,0,0,0.811641507850816,0,0.281695602532241,0.286822704408103,0.982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0.288666338176536,0,1.08890984861323,0.564862804660675,0,0,0,0,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| ||
|short_description=p4@TGDS | |short_description=p4@TGDS | ||
}} | }} |
Latest revision as of 05:29, 18 September 2015
Short description: | p4@TGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGDS_5end |
Coexpression cluster: | NA |
Association with transcript: | 97bp_to_ENST00000498294_5end |
EntrezGene: | TGDS |
HGNC: | 20324 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.11e-09 | 4 |
epithelial cell of large intestine | 2.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.11e-09 | 4 |
wall of intestine | 5.11e-09 | 4 |
gastrointestinal system mucosa | 5.11e-09 | 4 |
gastrointestinal system epithelium | 5.11e-09 | 4 |
intestinal epithelium | 5.11e-09 | 4 |
neural tissue | 4.98e-08 | 2 |
epithelium of mucosa | 1.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.54e-16 | 10 |
hematologic cancer | 1.55e-12 | 51 |
immune system cancer | 1.55e-12 | 51 |
melanoma | 1.03e-08 | 2 |
organ system cancer | 2.40e-07 | 137 |