FFCP PHASE1:Hg19::chr15:56657670..56657684,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374618 | |EntrezGene=374618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29585 | |HGNC=29585 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000561221,uc002adq.1_5end | |association_with_transcript=25bp_to_ENST00000561221,uc002adq.1_5end | ||
|cluster_id=chr15:56657670..56657684,+ | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_2_at_TEX9_5end | |description=CAGE_peak_2_at_TEX9_5end | ||
|id=chr15:56657670..56657684,+ | |id=chr15:56657670..56657684,+ | ||
|ontology_enrichment_celltype=CL:0000945!7.94e-17!24;CL:0000826!7.94e-17!24;CL:0000236!6.83e-10!14 | |ontology_enrichment_celltype=CL:0000945!7.94e-17!24;CL:0000826!7.94e-17!24;CL:0000236!6.83e-10!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.23e-58;24!CL:0000236;4.71e-35;13!CL:0000542;4.61e-17;53!CL:0000946;3.31e-09;1!CL:0000786;3.31e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.55e-58,24;CL:0000826,1.55e-58,24;CL:0000236,1.55e-41,14;CL:0000838,1.20e-25,52;CL:0000542,4.09e-25,53;CL:0000051,4.09e-25,53;CL:0002087,4.65e-10,115;CL:0002031,1.55e-09,120;CL:0000946,3.31e-09,1;CL:0000786,3.31e-09,1;CL:0000980,3.31e-09,1;CL:0002032,8.89e-09,161;CL:0000837,8.89e-09,161;CL:0000037,2.74e-08,168;CL:0000738,4.04e-08,136;CL:0000988,1.02e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.61e-17;53!UBERON:0008425;3.87e-09;1!UBERON:0001045;1.37e-08;1 | |||
|ontology_enrichment_disease=DOID:14566!7.33e-09!239;DOID:162!1.03e-08!235;DOID:0050687!6.83e-08!143 | |ontology_enrichment_disease=DOID:14566!7.33e-09!239;DOID:162!1.03e-08!235;DOID:0050687!6.83e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.65e-12;10!DOID:630;3.58e-09;1!DOID:0050177;3.58e-09;1!DOID:0050427;3.58e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.71e-12,10;DOID:630,3.58e-09,1;DOID:0050177,3.58e-09,1;DOID:0050427,3.58e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.37e-08;1!UBERON:0001154;1.37e-08;1!UBERON:0001153;1.37e-08;1!UBERON:0009854;1.37e-08;1!UBERON:0001961;1.37e-08;1!UBERON:0001744;1.37e-08;1!UBERON:0001042;1.37e-08;1!UBERON:0001735;1.37e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.32e-08,1;UBERON:0001961,1.32e-08,1;UBERON:0001744,1.32e-08,1;UBERON:0001735,1.32e-08,1;UBERON:0001154,1.91e-08,1;UBERON:0001153,1.91e-08,1;UBERON:0001045,1.91e-08,1 | |||
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| ||
|short_description=p2@TEX9 | |short_description=p2@TEX9 | ||
}} | }} |
Latest revision as of 05:26, 18 September 2015
Short description: | p2@TEX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TEX9_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 25bp_to_ENST00000561221, uc002adq.1_5end |
EntrezGene: | TEX9 |
HGNC: | 29585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.55e-58 | 24 |
pro-B cell | 1.55e-58 | 24 |
B cell | 1.55e-41 | 14 |
lymphoid lineage restricted progenitor cell | 1.20e-25 | 52 |
lymphocyte | 4.09e-25 | 53 |
common lymphoid progenitor | 4.09e-25 | 53 |
nongranular leukocyte | 4.65e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.55e-09 | 120 |
antibody secreting cell | 3.31e-09 | 1 |
plasma cell | 3.31e-09 | 1 |
plasmablast | 3.31e-09 | 1 |
hematopoietic oligopotent progenitor cell | 8.89e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.89e-09 | 161 |
hematopoietic stem cell | 2.74e-08 | 168 |
leukocyte | 4.04e-08 | 136 |
hematopoietic cell | 1.02e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.32e-08 | 1 |
mucosa-associated lymphoid tissue | 1.32e-08 | 1 |
lymphoid tissue | 1.32e-08 | 1 |
tonsillar ring | 1.32e-08 | 1 |
vermiform appendix | 1.91e-08 | 1 |
caecum | 1.91e-08 | 1 |
midgut | 1.91e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.71e-12 | 10 |
genetic disease | 3.58e-09 | 1 |
monogenic disease | 3.58e-09 | 1 |
xeroderma pigmentosum | 3.58e-09 | 1 |