FFCP PHASE1:Hg19::chr1:44399399..44399444,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9048 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=727 | |||
|TSSclassifier=strong | |||
|UniProt=E9PIK2 | |||
|association_with_transcript=8bp_to_ENST00000471394_5end | |||
|cluster_id=chr1:44399399..44399444,+ | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_1_at_ARTN_5end | |||
|id=chr1:44399399..44399444,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.27e-21!254;CL:0002076!7.02e-14!43;CL:0002368!3.10e-13!13;CL:0002202!1.68e-09!9;CL:0002632!1.68e-09!9;CL:0002159!1.46e-08!13;CL:0000223!5.05e-08!59;CL:0002077!5.88e-08!33;CL:0000221!7.11e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.28e-22;13!CL:0002076;9.34e-19;42!CL:0002202;1.12e-14;9!CL:0002632;1.12e-14;9!CL:0002159;1.14e-13;14!CL:0002077;6.26e-10;34!CL:0002251;1.08e-09;20!CL:0002322;6.22e-09;5!CL:0000082;2.13e-08;19!CL:0000128;2.44e-08;7!CL:0000126;2.44e-08;7!CL:0000127;2.44e-08;7!CL:0002328;9.56e-08;3!CL:0000307;1.35e-07;3!CL:0002621;3.64e-07;3!CL:0002166;7.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.52e-27,253;CL:0002076,2.83e-24,42;CL:0002368,5.07e-22,13;CL:0000223,6.20e-17,58;CL:0000221,8.06e-15,72;CL:0002202,1.29e-14,9;CL:0002632,1.29e-14,9;CL:0002159,1.25e-13,14;CL:0002321,8.51e-12,250;CL:0002077,1.58e-11,34;CL:0002251,9.95e-10,20;CL:0002322,5.91e-09,5;CL:0000076,1.80e-08,63;CL:0000082,2.02e-08,19;CL:0000128,2.75e-08,7;CL:0000126,2.75e-08,7;CL:0000127,2.75e-08,7;CL:0002453,2.75e-08,7;CL:0002328,9.57e-08,3;CL:0000068,1.37e-07,3;CL:0000069,1.37e-07,3;CL:0000307,1.37e-07,3;CL:0000377,1.37e-07,3;CL:0002621,3.54e-07,3;CL:0002166,8.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.24e-09;58!CL:0000377;1.35e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!1.01e-11!143;DOID:1749!9.31e-11!14;DOID:305!9.32e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.40e-18;14!DOID:3908;2.51e-09;5!DOID:3905;5.90e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.19e-18,14;DOID:0050687,3.61e-10,143;DOID:305,9.02e-10,106;DOID:3908,2.52e-09,5;DOID:3905,5.61e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.64e-09!72;UBERON:0004119!1.70e-08!169;UBERON:0000925!1.70e-08!169;UBERON:0006595!1.70e-08!169;UBERON:0005153!1.72e-07!37;UBERON:0007196!2.60e-07!14;UBERON:0001558!2.60e-07!14;UBERON:0003102!3.16e-07!95;UBERON:0000064!3.19e-07!219;UBERON:0000161!9.75e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;1.81e-12;22!UBERON:0005911;2.38e-11;36!UBERON:0007196;6.64e-10;15!UBERON:0001558;6.64e-10;15!UBERON:0000486;1.34e-09;12!UBERON:0005178;8.03e-09;34!UBERON:0002224;8.03e-09;34!UBERON:0003729;1.23e-08;13!UBERON:0004802;2.13e-08;19!UBERON:0000115;2.13e-08;19!UBERON:0005181;3.02e-08;35!UBERON:0005910;4.76e-08;6!UBERON:0003343;7.55e-08;4!UBERON:0004785;7.55e-08;4!UBERON:0000344;8.78e-08;20!UBERON:0004815;9.56e-08;3!UBERON:0002031;9.56e-08;3!UBERON:0001949;3.64e-07;3!UBERON:0000065;4.40e-07;44!UBERON:0002048;5.90e-07;22!UBERON:0000117;5.90e-07;22!UBERON:0000171;5.90e-07;22!UBERON:0000170;5.90e-07;22!UBERON:0000365;8.74e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.13e-11,74;UBERON:0007196,6.33e-10,15;UBERON:0001558,6.33e-10,15;UBERON:0005153,7.13e-10,37;UBERON:0005178,1.09e-09,34;UBERON:0002224,1.09e-09,34;UBERON:0005157,2.41e-09,47;UBERON:0005181,2.67e-09,35;UBERON:0004807,4.17e-09,28;UBERON:0003729,1.14e-08,13;UBERON:0000065,1.82e-08,54;UBERON:0004802,2.02e-08,19;UBERON:0000115,2.02e-08,19;UBERON:0005910,3.81e-08,6;UBERON:0003343,6.83e-08,4;UBERON:0004785,6.83e-08,4;UBERON:0004119,7.14e-08,160;UBERON:0000925,7.14e-08,160;UBERON:0006595,7.14e-08,160;UBERON:0000344,7.41e-08,20;UBERON:0004815,9.57e-08,3;UBERON:0002031,9.57e-08,3;UBERON:0001949,3.54e-07,3;UBERON:0008947,5.47e-07,38;UBERON:0003258,5.47e-07,38;UBERON:0002048,5.65e-07,22;UBERON:0000117,5.65e-07,22;UBERON:0000171,5.65e-07,22;UBERON:0000170,5.65e-07,22;UBERON:0005597,5.65e-07,22;UBERON:0000118,5.65e-07,22;UBERON:0000365,8.36e-07,5 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,1.72369481307503,1.02000345622126,2.19418305034661,2.0036519099174,2.05311637609326,2.76193807108566,0,0,0,0,0,0,33.0991640812414,29.8193859590468,40.3031871081799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0,0.43917392846563,0,36.0652335409617,32.9998154078142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,22.2407966592693,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0.468642863667593,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,13.5282597214308,10.6370987030426,12.0457930063382,4.39105342066543,3.71083351300159,1.39432731443422,2.38420426535352,3.28017106138317,2.18986415445498,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,13.4992851052609,26.9764207818287,21.3121421512657,8.70331384490178,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,13.1227367581488,7.39121364074982,5.10390350072591,16.6578852227298,24.1226168966588,23.7697261082431,0,0,0.207328115540772,0,0,0,0,0,5.13217338068116,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21570057940183,25.5064339352433,0,0,0.131124414959424,1.35359883872224,1.15523005656622,0,0,0.633309773357254,0,0,0,0,0,0.501689773854853,2.03901018436031,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0,0.325378394664303,0.309123034943167,0,0,9.18824860793876,8.45078319847478,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,14.5450725517661,14.9908252544783,13.3993348119313,11.0261981132549,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,20.4953100105341,22.119975092681,41.3785742473026,0.376575203107117,6.88808596273968,10.1082885400575,10.6423236848802,0.918893600827838,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0.191505370132367,0,0,0,0,0,2.50634477090067,0,0,0.605399121573143,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,7.10340367016033,0.71623345421307,0,0,0,0,0,0,0.844501632511974,0,0,0.251932747854276,0,0,0.933118762985422,1.3480252672099,0,0.511572370226872,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,10.696584138837,2.03402920234213,0,1.03423011972439,10.2061614684139,0,0,0,0,0,0,0.219385397153973,0,2.09135616417905,0.461701551022782,0,0,0,0.108647371922008,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,5.47860933009851,0,0.394584402849391,0,0,0,0.300646838828985,0.414752765588989,0,0,0,0,0,0,0.347119476670262,10.5831789207528,9.48945351726388,0,1.20390222730132,0,0.877071805034227,0.821154570532092,0.193978032976839,0,0.225980740780532,0,0,0,1.75996244461323,0.881747022766871,0,0.39961921916426,1.44090417154106,0,0.514784993585894,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.410716136675979,1.27746588066972,0,0,0,0,0,0.599037001496973,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,3.69732241469544,4.53880140770872,2.9080823662043,0,0,0,2.34804281319486,0.0788057072991982,0.472091293214983,1.79520572082991,4.30289614398828,7.29277749813892,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0.39669780522807,0,1.40963004463334,0.106787412567695,0,0,0,0.592834895693833,0,3.83004754662109,0,0,0,0,9.58029987126429,0,0,0,0,0.776503360757966,0.0620964029413835,0,0.124980407962107,0,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0.857766365499703,0,0,1.389134845943,0,0,0.308801447160972,0,0.706756583783524,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,1.90180911022764,0,0,0,0,0,25.4580704049389,15.5519315008243,0,0,1.57265941855896,0,5.26170842857478,5.52694792264376,0.619678821295011,3.35186950783946,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,13.6425328716426,3.42112197708447,4.03542916747694,1.61735932610474,0,0,0,0.0752103283492573,3.63069123666336,0.781514011233092,0,0.163771917510097,0.443568258651136,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,4.57265235335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| |||
|short_description=p1@ARTN | |||
}} |
Latest revision as of 05:23, 18 September 2015
Short description: | p1@ARTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARTN_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 8bp_to_ENST00000471394_5end |
EntrezGene: | ARTN |
HGNC: | 727 |
UniProt: | E9PIK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.52e-27 | 253 |
endo-epithelial cell | 2.83e-24 | 42 |
respiratory epithelial cell | 5.07e-22 | 13 |
endodermal cell | 6.20e-17 | 58 |
ectodermal cell | 8.06e-15 | 72 |
epithelial cell of tracheobronchial tree | 1.29e-14 | 9 |
epithelial cell of lower respiratory tract | 1.29e-14 | 9 |
general ecto-epithelial cell | 1.25e-13 | 14 |
embryonic cell | 8.51e-12 | 250 |
ecto-epithelial cell | 1.58e-11 | 34 |
epithelial cell of alimentary canal | 9.95e-10 | 20 |
embryonic stem cell | 5.91e-09 | 5 |
squamous epithelial cell | 1.80e-08 | 63 |
epithelial cell of lung | 2.02e-08 | 19 |
oligodendrocyte | 2.75e-08 | 7 |
macroglial cell | 2.75e-08 | 7 |
astrocyte | 2.75e-08 | 7 |
oligodendrocyte precursor cell | 2.75e-08 | 7 |
bronchial epithelial cell | 9.57e-08 | 3 |
duct epithelial cell | 1.37e-07 | 3 |
branched duct epithelial cell | 1.37e-07 | 3 |
tracheal epithelial cell | 1.37e-07 | 3 |
tracheoblast | 1.37e-07 | 3 |
gingival epithelial cell | 3.54e-07 | 3 |
epithelial cell of Malassez | 8.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.13e-11 | 74 |
tracheobronchial tree | 6.33e-10 | 15 |
lower respiratory tract | 6.33e-10 | 15 |
epithelial bud | 7.13e-10 | 37 |
thoracic cavity element | 1.09e-09 | 34 |
thoracic cavity | 1.09e-09 | 34 |
epithelial fold | 2.41e-09 | 47 |
thoracic segment organ | 2.67e-09 | 35 |
respiratory system epithelium | 4.17e-09 | 28 |
mouth mucosa | 1.14e-08 | 13 |
respiratory tract | 1.82e-08 | 54 |
respiratory tract epithelium | 2.02e-08 | 19 |
lung epithelium | 2.02e-08 | 19 |
transitional epithelium | 3.81e-08 | 6 |
mucosa of oral region | 6.83e-08 | 4 |
respiratory system mucosa | 6.83e-08 | 4 |
endoderm-derived structure | 7.14e-08 | 160 |
endoderm | 7.14e-08 | 160 |
presumptive endoderm | 7.14e-08 | 160 |
mucosa | 7.41e-08 | 20 |
lower respiratory tract epithelium | 9.57e-08 | 3 |
epithelium of bronchus | 9.57e-08 | 3 |
gingival epithelium | 3.54e-07 | 3 |
respiratory primordium | 5.47e-07 | 38 |
endoderm of foregut | 5.47e-07 | 38 |
lung | 5.65e-07 | 22 |
respiratory tube | 5.65e-07 | 22 |
respiration organ | 5.65e-07 | 22 |
pair of lungs | 5.65e-07 | 22 |
lung primordium | 5.65e-07 | 22 |
lung bud | 5.65e-07 | 22 |
urothelium | 8.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.19e-18 | 14 |
cell type cancer | 3.61e-10 | 143 |
carcinoma | 9.02e-10 | 106 |
non-small cell lung carcinoma | 2.52e-09 | 5 |
lung carcinoma | 5.61e-07 | 9 |