FFCP PHASE1:Hg19::chr19:41858983..41859014,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7040 | |EntrezGene=7040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11766 | |HGNC=11766 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_EU832132,EU832225_5end | |association_with_transcript=-27bp_to_EU832132,EU832225_5end | ||
|cluster_id=chr19:41858983..41859014,- | |||
|description=CAGE_peak_10_at_TGFB1_5end | |description=CAGE_peak_10_at_TGFB1_5end | ||
|id=chr19:41858983..41859014,- | |id=chr19:41858983..41859014,- | ||
|ontology_enrichment_celltype=CL:0000144!1.70e-23!625;CL:0000012!5.04e-23!682;CL:0000548!1.61e-21!679;CL:0000004!1.61e-21!679;CL:0000255!1.61e-21!679;CL:0000003!8.60e-20!722;CL:0002371!9.06e-19!591;CL:0000034!5.20e-17!444;CL:0000048!4.33e-15!430;CL:0000723!2.89e-14!436;CL:0000988!6.48e-13!182;CL:0000037!3.83e-11!172;CL:0000566!3.83e-11!172;CL:0002032!1.66e-10!165;CL:0000837!1.66e-10!165;CL:0000219!1.86e-10!390;CL:0000063!4.75e-10!578;CL:0000134!5.13e-10!358;CL:0002320!7.46e-10!365;CL:0002087!9.13e-08!119;CL:0000222!2.50e-07!119;CL:0000542!8.90e-07!53;CL:0000051!8.90e-07!53;CL:0002031!9.51e-07!124 | |ontology_enrichment_celltype=CL:0000144!1.70e-23!625;CL:0000012!5.04e-23!682;CL:0000548!1.61e-21!679;CL:0000004!1.61e-21!679;CL:0000255!1.61e-21!679;CL:0000003!8.60e-20!722;CL:0002371!9.06e-19!591;CL:0000034!5.20e-17!444;CL:0000048!4.33e-15!430;CL:0000723!2.89e-14!436;CL:0000988!6.48e-13!182;CL:0000037!3.83e-11!172;CL:0000566!3.83e-11!172;CL:0002032!1.66e-10!165;CL:0000837!1.66e-10!165;CL:0000219!1.86e-10!390;CL:0000063!4.75e-10!578;CL:0000134!5.13e-10!358;CL:0002320!7.46e-10!365;CL:0002087!9.13e-08!119;CL:0000222!2.50e-07!119;CL:0000542!8.90e-07!53;CL:0000051!8.90e-07!53;CL:0002031!9.51e-07!124 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.60e-14,441;CL:0000048,2.54e-12,427;CL:0000723,1.11e-11,433;CL:0000988,1.45e-11,177;CL:0002032,3.74e-10,161;CL:0000837,3.74e-10,161;CL:0000037,3.93e-10,168;CL:0002087,5.98e-08,115;CL:0000219,6.15e-08,386;CL:0000134,9.64e-08,354;CL:0002320,9.94e-08,361;CL:0000542,6.94e-07,53;CL:0000051,6.94e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.19e-13!51;DOID:0060083!5.19e-13!51;DOID:1240!1.55e-09!39;DOID:8692!8.91e-09!31 | |ontology_enrichment_disease=DOID:2531!5.19e-13!51;DOID:0060083!5.19e-13!51;DOID:1240!1.55e-09!39;DOID:8692!8.91e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.80e-07;31!DOID:2531;3.91e-07;51!DOID:0060083;3.91e-07;51!DOID:1240;8.42e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.99e-11,51;DOID:0060083,1.99e-11,51;DOID:1240,1.42e-08,39;DOID:8692,6.03e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.45e-10!375;UBERON:0003081!4.79e-08!216;UBERON:0004535!9.23e-08!110;UBERON:0000055!9.39e-08!69;UBERON:0002049!9.86e-08!79;UBERON:0007798!9.86e-08!79;UBERON:0001637!4.05e-07!42;UBERON:0003509!4.05e-07!42;UBERON:0004572!4.05e-07!42;UBERON:0001981!5.59e-07!60;UBERON:0007500!5.59e-07!60;UBERON:0004537!5.59e-07!60;UBERON:0006965!5.59e-07!60;UBERON:0001009!8.00e-07!113 | |ontology_enrichment_uberon=UBERON:0002384!6.45e-10!375;UBERON:0003081!4.79e-08!216;UBERON:0004535!9.23e-08!110;UBERON:0000055!9.39e-08!69;UBERON:0002049!9.86e-08!79;UBERON:0007798!9.86e-08!79;UBERON:0001637!4.05e-07!42;UBERON:0003509!4.05e-07!42;UBERON:0004572!4.05e-07!42;UBERON:0001981!5.59e-07!60;UBERON:0007500!5.59e-07!60;UBERON:0004537!5.59e-07!60;UBERON:0006965!5.59e-07!60;UBERON:0001009!8.00e-07!113 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.25e-08,78;UBERON:0007798,1.25e-08,78;UBERON:0000055,7.52e-08,68;UBERON:0004535,1.01e-07,109;UBERON:0002384,1.82e-07,371;UBERON:0001637,2.83e-07,42;UBERON:0003509,2.83e-07,42;UBERON:0004572,2.83e-07,42;UBERON:0007500,3.73e-07,59;UBERON:0001981,3.73e-07,59;UBERON:0004537,3.73e-07,59;UBERON:0006965,3.73e-07,59;UBERON:0001009,4.55e-07,112 | |||
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| ||
|short_description=p10@TGFB1 | |short_description=p10@TGFB1 | ||
}} | }} |
Latest revision as of 05:18, 18 September 2015
Short description: | p10@TGFB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TGFB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_EU832132, EU832225_5end |
EntrezGene: | TGFB1 |
HGNC: | 11766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.60e-14 | 441 |
multi fate stem cell | 2.54e-12 | 427 |
somatic stem cell | 1.11e-11 | 433 |
hematopoietic cell | 1.45e-11 | 177 |
hematopoietic oligopotent progenitor cell | 3.74e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.74e-10 | 161 |
hematopoietic stem cell | 3.93e-10 | 168 |
nongranular leukocyte | 5.98e-08 | 115 |
motile cell | 6.15e-08 | 386 |
mesenchymal cell | 9.64e-08 | 354 |
connective tissue cell | 9.94e-08 | 361 |
lymphocyte | 6.94e-07 | 53 |
common lymphoid progenitor | 6.94e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.25e-08 | 78 |
vascular system | 1.25e-08 | 78 |
vessel | 7.52e-08 | 68 |
cardiovascular system | 1.01e-07 | 109 |
connective tissue | 1.82e-07 | 371 |
artery | 2.83e-07 | 42 |
arterial blood vessel | 2.83e-07 | 42 |
arterial system | 2.83e-07 | 42 |
epithelial tube open at both ends | 3.73e-07 | 59 |
blood vessel | 3.73e-07 | 59 |
blood vasculature | 3.73e-07 | 59 |
vascular cord | 3.73e-07 | 59 |
circulatory system | 4.55e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.99e-11 | 51 |
immune system cancer | 1.99e-11 | 51 |
leukemia | 1.42e-08 | 39 |
myeloid leukemia | 6.03e-08 | 31 |