FFCP PHASE1:Hg19::chr12:32974731..32974751,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5318 | |EntrezGene=5318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9024 | |HGNC=9024 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000549461_5end | |association_with_transcript=0bp_to_ENST00000549461_5end | ||
|cluster_id=chr12:32974731..32974751,- | |||
|coexpression_cluster_id=C380 | |coexpression_cluster_id=C380 | ||
|description=CAGE_peak_6_at_PKP2_5end | |description=CAGE_peak_6_at_PKP2_5end | ||
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|ontology_enrichment_celltype=CL:0000946!8.12e-08!1;CL:0000786!8.12e-08!1;CL:0000980!8.12e-08!1 | |ontology_enrichment_celltype=CL:0000946!8.12e-08!1;CL:0000786!8.12e-08!1;CL:0000980!8.12e-08!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.33e-29;1!UBERON:0005062;2.37e-29;4!UBERON:0007284;2.37e-29;4!UBERON:0010226;2.73e-29;1 | |ontology_enrichment_development_v019=UBERON:0004140;1.33e-29;1!UBERON:0005062;2.37e-29;4!UBERON:0007284;2.37e-29;4!UBERON:0010226;2.73e-29;1 | ||
|ontology_enrichment_disease=DOID:114!5.62e-15!2;DOID:178!2.52e-08!1;DOID:326!2.52e-08!1;DOID:3978!2.52e-08!1;DOID:3394!2.52e-08!1;DOID:5844!2.52e-08!1;DOID:1287!6.42e-08!4 | |ontology_enrichment_disease=DOID:114!5.62e-15!2;DOID:178!2.52e-08!1;DOID:326!2.52e-08!1;DOID:3978!2.52e-08!1;DOID:3394!2.52e-08!1;DOID:5844!2.52e-08!1;DOID:1287!6.42e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:114;1.73e-56;2!DOID:178;4.20e-29;1!DOID:326;4.20e-29;1!DOID:3978;4.20e-29;1!DOID:3394;4.20e-29;1!DOID:5844;4.20e-29;1!DOID:1287;6.94e-29;4 | |ontology_enrichment_disease_v019=DOID:114;1.73e-56;2!DOID:178;4.20e-29;1!DOID:326;4.20e-29;1!DOID:3978;4.20e-29;1!DOID:3394;4.20e-29;1!DOID:5844;4.20e-29;1!DOID:1287;6.94e-29;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,2.00e-56,2;DOID:178,4.20e-29,1;DOID:326,4.20e-29,1;DOID:3978,4.20e-29,1;DOID:3394,4.20e-29,1;DOID:5844,4.20e-29,1;DOID:1287,7.46e-29,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-26!115;UBERON:0003978!9.13e-22!3;UBERON:0009751!9.13e-22!3;UBERON:0000946!9.13e-22!3;UBERON:0002523!9.13e-22!3;UBERON:0005983!9.13e-22!3;UBERON:0002165!9.13e-22!3;UBERON:0002062!9.13e-22!3;UBERON:0007280!9.13e-22!3;UBERON:0004151!1.70e-21!3;UBERON:0007100!1.39e-19!27;UBERON:0001950!5.53e-19!20;UBERON:0001869!3.66e-18!32;UBERON:0002619!3.07e-17!22;UBERON:0001893!4.96e-17!34;UBERON:0000956!4.01e-15!25;UBERON:0000203!4.01e-15!25;UBERON:0002133!5.24e-15!2;UBERON:0002081!7.40e-15!2;UBERON:0002791!2.86e-14!33;UBERON:0003075!3.98e-14!86;UBERON:0007284!3.98e-14!86;UBERON:0002780!6.48e-14!41;UBERON:0001890!6.48e-14!41;UBERON:0006240!6.48e-14!41;UBERON:0002020!8.03e-14!34;UBERON:0003528!8.03e-14!34;UBERON:0003080!1.49e-13!42;UBERON:0002616!1.88e-13!59;UBERON:0002346!2.24e-13!90;UBERON:0002021!2.00e-12!5;UBERON:0001049!1.16e-11!57;UBERON:0005068!1.16e-11!57;UBERON:0006241!1.16e-11!57;UBERON:0007135!1.16e-11!57;UBERON:0000955!4.96e-11!69;UBERON:0006238!4.96e-11!69;UBERON:0001017!1.21e-10!82;UBERON:0000200!1.58e-10!6;UBERON:0005743!4.76e-10!86;UBERON:0000948!5.16e-10!24;UBERON:0005498!5.16e-10!24;UBERON:0004140!5.16e-10!24;UBERON:0009881!5.16e-10!24;UBERON:0004141!5.16e-10!24;UBERON:0003084!5.16e-10!24;UBERON:0007005!5.16e-10!24;UBERON:0004139!5.16e-10!24;UBERON:0004291!5.16e-10!24;UBERON:0002771!5.49e-10!3;UBERON:0001009!3.23e-09!113;UBERON:0000073!6.78e-09!94;UBERON:0001016!6.78e-09!94;UBERON:0003056!6.83e-09!61;UBERON:0002146!1.65e-08!1;UBERON:0005623!1.65e-08!1;UBERON:0002135!2.04e-08!1;UBERON:0002084!2.19e-08!1;UBERON:0002082!2.19e-08!1;UBERON:0004706!2.19e-08!1;UBERON:0002134!2.71e-08!1;UBERON:0005208!2.71e-08!1;UBERON:0005946!2.71e-08!1;UBERON:0005965!2.71e-08!1;UBERON:0002078!2.71e-08!1;UBERON:0002079!2.90e-08!1;UBERON:0001871!5.03e-08!7;UBERON:0002342!5.07e-08!14;UBERON:0005062!5.07e-08!14;UBERON:0002902!9.29e-08!1;UBERON:0009899!9.29e-08!1;UBERON:0007190!1.06e-07!1;UBERON:0002363!1.14e-07!1;UBERON:0007647!1.14e-07!1;UBERON:0010115!1.14e-07!1;UBERON:0000025!1.54e-07!194;UBERON:0000178!1.97e-07!15;UBERON:0000179!1.97e-07!15;UBERON:0000463!1.97e-07!15;UBERON:0003103!9.02e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!1.64e-26!115;UBERON:0003978!9.13e-22!3;UBERON:0009751!9.13e-22!3;UBERON:0000946!9.13e-22!3;UBERON:0002523!9.13e-22!3;UBERON:0005983!9.13e-22!3;UBERON:0002165!9.13e-22!3;UBERON:0002062!9.13e-22!3;UBERON:0007280!9.13e-22!3;UBERON:0004151!1.70e-21!3;UBERON:0007100!1.39e-19!27;UBERON:0001950!5.53e-19!20;UBERON:0001869!3.66e-18!32;UBERON:0002619!3.07e-17!22;UBERON:0001893!4.96e-17!34;UBERON:0000956!4.01e-15!25;UBERON:0000203!4.01e-15!25;UBERON:0002133!5.24e-15!2;UBERON:0002081!7.40e-15!2;UBERON:0002791!2.86e-14!33;UBERON:0003075!3.98e-14!86;UBERON:0007284!3.98e-14!86;UBERON:0002780!6.48e-14!41;UBERON:0001890!6.48e-14!41;UBERON:0006240!6.48e-14!41;UBERON:0002020!8.03e-14!34;UBERON:0003528!8.03e-14!34;UBERON:0003080!1.49e-13!42;UBERON:0002616!1.88e-13!59;UBERON:0002346!2.24e-13!90;UBERON:0002021!2.00e-12!5;UBERON:0001049!1.16e-11!57;UBERON:0005068!1.16e-11!57;UBERON:0006241!1.16e-11!57;UBERON:0007135!1.16e-11!57;UBERON:0000955!4.96e-11!69;UBERON:0006238!4.96e-11!69;UBERON:0001017!1.21e-10!82;UBERON:0000200!1.58e-10!6;UBERON:0005743!4.76e-10!86;UBERON:0000948!5.16e-10!24;UBERON:0005498!5.16e-10!24;UBERON:0004140!5.16e-10!24;UBERON:0009881!5.16e-10!24;UBERON:0004141!5.16e-10!24;UBERON:0003084!5.16e-10!24;UBERON:0007005!5.16e-10!24;UBERON:0004139!5.16e-10!24;UBERON:0004291!5.16e-10!24;UBERON:0002771!5.49e-10!3;UBERON:0001009!3.23e-09!113;UBERON:0000073!6.78e-09!94;UBERON:0001016!6.78e-09!94;UBERON:0003056!6.83e-09!61;UBERON:0002146!1.65e-08!1;UBERON:0005623!1.65e-08!1;UBERON:0002135!2.04e-08!1;UBERON:0002084!2.19e-08!1;UBERON:0002082!2.19e-08!1;UBERON:0004706!2.19e-08!1;UBERON:0002134!2.71e-08!1;UBERON:0005208!2.71e-08!1;UBERON:0005946!2.71e-08!1;UBERON:0005965!2.71e-08!1;UBERON:0002078!2.71e-08!1;UBERON:0002079!2.90e-08!1;UBERON:0001871!5.03e-08!7;UBERON:0002342!5.07e-08!14;UBERON:0005062!5.07e-08!14;UBERON:0002902!9.29e-08!1;UBERON:0009899!9.29e-08!1;UBERON:0007190!1.06e-07!1;UBERON:0002363!1.14e-07!1;UBERON:0007647!1.14e-07!1;UBERON:0010115!1.14e-07!1;UBERON:0000025!1.54e-07!194;UBERON:0000178!1.97e-07!15;UBERON:0000179!1.97e-07!15;UBERON:0000463!1.97e-07!15;UBERON:0003103!9.02e-07!69 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.82e-51,27;UBERON:0003978,1.01e-38,3;UBERON:0009751,1.01e-38,3;UBERON:0000946,1.01e-38,3;UBERON:0002523,1.01e-38,3;UBERON:0005983,1.01e-38,3;UBERON:0002165,1.01e-38,3;UBERON:0002062,1.01e-38,3;UBERON:0007280,1.01e-38,3;UBERON:0002146,7.48e-30,1;UBERON:0005623,7.48e-30,1;UBERON:0002135,1.78e-29,1;UBERON:0002084,2.37e-29,1;UBERON:0002082,2.37e-29,1;UBERON:0010226,2.37e-29,1;UBERON:0003103,1.45e-20,68;UBERON:0000948,2.12e-19,24;UBERON:0005498,2.12e-19,24;UBERON:0004140,2.12e-19,24;UBERON:0009881,2.12e-19,24;UBERON:0004141,2.12e-19,24;UBERON:0003084,2.12e-19,24;UBERON:0007005,2.12e-19,24;UBERON:0004139,2.12e-19,24;UBERON:0004291,2.12e-19,24;UBERON:0004797,2.90e-17,7;UBERON:0002133,1.78e-15,2;UBERON:0001009,1.36e-12,112;UBERON:0010313,2.12e-12,10;UBERON:0002342,2.12e-12,10;UBERON:0005062,2.12e-12,10;UBERON:0004151,9.90e-11,3;UBERON:0007023,3.66e-09,114 | |||
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|short_description=p6@PKP2 | |short_description=p6@PKP2 | ||
}} | }} |
Latest revision as of 05:17, 18 September 2015
Short description: | p6@PKP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PKP2_5end |
Coexpression cluster: | C380_heart_left_throat_skeletal_mesothelioma_aorta_Mesothelial |
Association with transcript: | 0bp_to_ENST00000549461_5end |
EntrezGene: | PKP2 |
HGNC: | 9024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.82e-51 | 27 |
valve | 1.01e-38 | 3 |
cardiac mesenchyme | 1.01e-38 | 3 |
cardial valve | 1.01e-38 | 3 |
tunica intima | 1.01e-38 | 3 |
heart layer | 1.01e-38 | 3 |
endocardium | 1.01e-38 | 3 |
endocardial cushion | 1.01e-38 | 3 |
presumptive endocardium | 1.01e-38 | 3 |
pulmonary valve | 7.48e-30 | 1 |
semi-lunar valve | 7.48e-30 | 1 |
mitral valve | 1.78e-29 | 1 |
heart left ventricle | 2.37e-29 | 1 |
cardiac ventricle | 2.37e-29 | 1 |
future cardiac ventricle | 2.37e-29 | 1 |
compound organ | 1.45e-20 | 68 |
heart | 2.12e-19 | 24 |
primitive heart tube | 2.12e-19 | 24 |
primary heart field | 2.12e-19 | 24 |
anterior lateral plate mesoderm | 2.12e-19 | 24 |
heart tube | 2.12e-19 | 24 |
heart primordium | 2.12e-19 | 24 |
cardiac mesoderm | 2.12e-19 | 24 |
cardiogenic plate | 2.12e-19 | 24 |
heart rudiment | 2.12e-19 | 24 |
blood vessel layer | 2.90e-17 | 7 |
atrioventricular valve | 1.78e-15 | 2 |
circulatory system | 1.36e-12 | 112 |
neural crest-derived structure | 2.12e-12 | 10 |
neural crest | 2.12e-12 | 10 |
neural fold | 2.12e-12 | 10 |
cardiac chamber | 9.90e-11 | 3 |
adult organism | 3.66e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.00e-56 | 2 |
vascular disease | 4.20e-29 | 1 |
ischemia | 4.20e-29 | 1 |
extrinsic cardiomyopathy | 4.20e-29 | 1 |
myocardial ischemia | 4.20e-29 | 1 |
myocardial infarction | 4.20e-29 | 1 |
cardiovascular system disease | 7.46e-29 | 4 |