FFCP PHASE1:Hg19::chr8:39792165..39792176,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=169355 | |EntrezGene=169355 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27269 | |HGNC=27269 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000343295_5end | |association_with_transcript=32bp_to_ENST00000343295_5end | ||
|cluster_id=chr8:39792165..39792176,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_1_at_IDO2_5end | |description=CAGE_peak_1_at_IDO2_5end | ||
|id=chr8:39792165..39792176,+ | |id=chr8:39792165..39792176,+ | ||
|ontology_enrichment_celltype=CL:0002253!5.48e-18!2;CL:0002563!1.12e-09!4 | |ontology_enrichment_celltype=CL:0002253!5.48e-18!2;CL:0002563!1.12e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0002253;4.32e-26;2!CL:0002563;8.82e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.32e-26,2;CL:0002563,8.82e-14,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.42e-50;1!UBERON:0004872;2.03e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006834!7.06e-34!1;UBERON:0005795!3.27e-14!22;UBERON:0001052!1.12e-09!4;UBERON:0001242!1.12e-09!4;UBERON:0001262!1.12e-09!4;UBERON:0004786!1.12e-09!4;UBERON:0004808!1.12e-09!4;UBERON:0001277!1.12e-09!4;UBERON:0001987!1.22e-09!4;UBERON:0004340!1.22e-09!4;UBERON:0003350!5.35e-08!5;UBERON:0004907!5.35e-08!5;UBERON:0000995!2.77e-07!21;UBERON:0003975!5.40e-07!22 | |ontology_enrichment_uberon=UBERON:0006834!7.06e-34!1;UBERON:0005795!3.27e-14!22;UBERON:0001052!1.12e-09!4;UBERON:0001242!1.12e-09!4;UBERON:0001262!1.12e-09!4;UBERON:0004786!1.12e-09!4;UBERON:0004808!1.12e-09!4;UBERON:0001277!1.12e-09!4;UBERON:0001987!1.22e-09!4;UBERON:0004340!1.22e-09!4;UBERON:0003350!5.35e-08!5;UBERON:0004907!5.35e-08!5;UBERON:0000995!2.77e-07!21;UBERON:0003975!5.40e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.82e-14;4!UBERON:0001242;8.82e-14;4!UBERON:0001262;8.82e-14;4!UBERON:0004786;8.82e-14;4!UBERON:0004808;8.82e-14;4!UBERON:0001277;8.82e-14;4!UBERON:0001987;1.00e-13;4!UBERON:0004907;2.66e-11;5!UBERON:0000485;1.89e-08;7!UBERON:0003929;1.89e-08;7!UBERON:0003350;1.49e-07;8!UBERON:0001155;7.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.82e-14,4;UBERON:0001242,8.82e-14,4;UBERON:0001262,8.82e-14,4;UBERON:0004786,8.82e-14,4;UBERON:0004808,8.82e-14,4;UBERON:0001277,8.82e-14,4;UBERON:0001987,1.00e-13,4;UBERON:0004340,1.00e-13,4;UBERON:0004907,2.66e-11,5;UBERON:0003124,2.03e-08,7;UBERON:0003350,1.49e-07,8;UBERON:0001155,7.48e-07,9;UBERON:0000485,7.48e-07,9 | |||
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|short_description=p1@IDO2 | |short_description=p1@IDO2 | ||
}} | }} |
Latest revision as of 05:15, 18 September 2015
Short description: | p1@IDO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IDO2_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 32bp_to_ENST00000343295_5end |
EntrezGene: | IDO2 |
HGNC: | 27269 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.32e-26 | 2 |
intestinal epithelial cell | 8.82e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.82e-14 | 4 |
intestinal mucosa | 8.82e-14 | 4 |
wall of intestine | 8.82e-14 | 4 |
gastrointestinal system mucosa | 8.82e-14 | 4 |
gastrointestinal system epithelium | 8.82e-14 | 4 |
intestinal epithelium | 8.82e-14 | 4 |
placenta | 1.00e-13 | 4 |
allantois | 1.00e-13 | 4 |
lower digestive tract | 2.66e-11 | 5 |
chorion | 2.03e-08 | 7 |
epithelium of mucosa | 1.49e-07 | 8 |
colon | 7.48e-07 | 9 |
simple columnar epithelium | 7.48e-07 | 9 |