FFCP PHASE1:Hg19::chr19:41858620..41858632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7040 | |EntrezGene=7040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11766 | |HGNC=11766 | ||
|TSSclassifier=strong | |||
|UniProt=P01137 | |UniProt=P01137 | ||
|association_with_transcript=316bp_to_BT007245_5end | |association_with_transcript=316bp_to_BT007245_5end | ||
|cluster_id=chr19:41858620..41858632,- | |||
|coexpression_cluster_id=C1822 | |coexpression_cluster_id=C1822 | ||
|description=CAGE_peak_13_at_TGFB1_5end | |description=CAGE_peak_13_at_TGFB1_5end | ||
|id=chr19:41858620..41858632,- | |id=chr19:41858620..41858632,- | ||
|ontology_enrichment_celltype=CL:0002057!7.60e-24!42;CL:0000048!1.31e-23!430;CL:0000723!7.86e-23!436;CL:0000134!2.11e-22!358;CL:0002320!2.13e-22!365;CL:0000860!1.09e-21!45;CL:0000034!1.12e-21!444;CL:0002371!1.98e-20!591;CL:0000766!2.13e-19!76;CL:0000144!1.35e-18!625;CL:0002009!1.75e-18!65;CL:0000219!2.49e-18!390;CL:0000738!2.67e-18!140;CL:0000557!2.90e-18!71;CL:0000003!4.87e-18!722;CL:0002194!6.73e-18!63;CL:0000576!6.73e-18!63;CL:0000040!6.73e-18!63;CL:0000559!6.73e-18!63;CL:0000839!1.32e-17!70;CL:0002087!3.31e-17!119;CL:0000037!3.62e-17!172;CL:0000566!3.62e-17!172;CL:0002031!4.98e-17!124;CL:0000988!1.15e-16!182;CL:0002032!1.53e-16!165;CL:0000837!1.53e-16!165;CL:0000763!7.03e-16!112;CL:0000049!7.03e-16!112;CL:0000012!7.28e-13!682;CL:0000548!1.03e-12!679;CL:0000004!1.03e-12!679;CL:0000255!1.03e-12!679;CL:0000063!1.54e-11!578 | |ontology_enrichment_celltype=CL:0002057!7.60e-24!42;CL:0000048!1.31e-23!430;CL:0000723!7.86e-23!436;CL:0000134!2.11e-22!358;CL:0002320!2.13e-22!365;CL:0000860!1.09e-21!45;CL:0000034!1.12e-21!444;CL:0002371!1.98e-20!591;CL:0000766!2.13e-19!76;CL:0000144!1.35e-18!625;CL:0002009!1.75e-18!65;CL:0000219!2.49e-18!390;CL:0000738!2.67e-18!140;CL:0000557!2.90e-18!71;CL:0000003!4.87e-18!722;CL:0002194!6.73e-18!63;CL:0000576!6.73e-18!63;CL:0000040!6.73e-18!63;CL:0000559!6.73e-18!63;CL:0000839!1.32e-17!70;CL:0002087!3.31e-17!119;CL:0000037!3.62e-17!172;CL:0000566!3.62e-17!172;CL:0002031!4.98e-17!124;CL:0000988!1.15e-16!182;CL:0002032!1.53e-16!165;CL:0000837!1.53e-16!165;CL:0000763!7.03e-16!112;CL:0000049!7.03e-16!112;CL:0000012!7.28e-13!682;CL:0000548!1.03e-12!679;CL:0000004!1.03e-12!679;CL:0000255!1.03e-12!679;CL:0000063!1.54e-11!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.88e-45;33!CL:0002057;9.88e-45;33!CL:0000473;4.42e-36;39!CL:0000234;4.42e-36;39!CL:0000576;2.63e-28;48!CL:0000766;1.20e-19;69!CL:0002087;2.84e-10;104!CL:0000763;1.48e-09;100!CL:0000738;2.84e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.45e-49,48;CL:0000234,6.45e-49,48;CL:0000860,9.35e-49,42;CL:0002057,9.35e-49,42;CL:0002194,1.69e-38,59;CL:0000576,1.69e-38,59;CL:0000040,1.69e-38,59;CL:0000559,1.69e-38,59;CL:0002009,8.25e-37,61;CL:0000766,2.87e-36,72;CL:0000839,4.90e-33,66;CL:0000557,2.38e-32,67;CL:0002087,1.62e-28,115;CL:0000738,2.93e-27,136;CL:0002031,3.47e-24,120;CL:0000763,8.07e-22,108;CL:0000049,8.07e-22,108;CL:0000037,1.28e-20,168;CL:0002032,2.06e-19,161;CL:0000837,2.06e-19,161;CL:0000988,1.10e-18,177;CL:0000134,4.92e-15,354;CL:0002320,2.72e-14,361;CL:0000219,3.13e-12,386;CL:0000048,1.13e-11,427;CL:0000723,3.52e-11,433;CL:0000034,1.51e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.04e-35;42!CL:0000049;1.24e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.92e-21!375;UBERON:0003081!1.48e-18!216;UBERON:0002390!5.79e-18!102;UBERON:0003061!5.79e-18!102;UBERON:0002371!1.70e-16!80;UBERON:0002193!4.91e-16!112;UBERON:0001474!1.30e-15!86;UBERON:0004765!2.30e-12!101;UBERON:0001434!2.30e-12!101;UBERON:0002204!3.30e-11!167;UBERON:0002405!4.27e-11!115 | |ontology_enrichment_uberon=UBERON:0002384!2.92e-21!375;UBERON:0003081!1.48e-18!216;UBERON:0002390!5.79e-18!102;UBERON:0003061!5.79e-18!102;UBERON:0002371!1.70e-16!80;UBERON:0002193!4.91e-16!112;UBERON:0001474!1.30e-15!86;UBERON:0004765!2.30e-12!101;UBERON:0001434!2.30e-12!101;UBERON:0002204!3.30e-11!167;UBERON:0002405!4.27e-11!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-28,98;UBERON:0003061,1.34e-28,98;UBERON:0002371,5.41e-27,76;UBERON:0002193,1.12e-25,108;UBERON:0001474,1.75e-25,82;UBERON:0004765,4.52e-22,90;UBERON:0002405,7.99e-21,93;UBERON:0003081,1.84e-20,203;UBERON:0001434,1.10e-19,100;UBERON:0002384,2.76e-13,371;UBERON:0000926,2.08e-11,315;UBERON:0004120,2.08e-11,315;UBERON:0006603,2.08e-11,315;UBERON:0002204,9.52e-11,167 | |||
|phase1_expression=0.181678379270557,2.5692062866918,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0,0,2.01697543935533,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0.753255837568817,0.382067028739756,0.0821005894499457,0.472264687882075,0.786728553697808,0.383829398097213,1.39334510984468,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0,1.10799081706375,0.802177789880567,1.08505435357926,0.447830948479849,1.6194683300949,0,4.36194716338694,3.40088349319928,1.94067248950253,4.64858073811369,2.05583944010913,3.71647645074124,4.31538588483226,4.61089271752381,6.14853797710322,1.37898272294647,1.93645405075148,1.35426486594342,4.70605848856512,4.91231070104122,3.37085226667627,9.48860066349798,1.60464513538047,5.11469700639233,4.28806690242731,5.58498241340569,5.11469700639233,5.22376629531451,1.70215567407342,3.11411124497787,6.78371396193207,5.73631210262222,4.56096573880745,1.21079900526674,3.68277635987565,2.53169909952708,1.26753171787165,1.27562579979026,0.838634582033504,1.01095768031846,1.20141514273205,0.16072558669708,0.285012743741249,1.19350006319454,0.182664153764634,0,2.18455444504853,0,0,0,0.574752439954483,0.661044872784862,0,0,1.17447437874188,0.382273228125229,0,0.560508562981536,0.263384084775077,0.590129310341499,3.53709686474248,0.411202997999018,0.668745981562712,0.32592226663359,0.473447805734733,0,1.22551502573691,1.17842362989935,1.55073726208535,1.08321545506006,0.896639238079726,0.780356085359269,0.328875809207352,0.276350017785848,0.579606171470105,0.444859689486181,0.535081656179426,0,0.453237370790265,0.766440987203842,0.68725489096526,1.01207876807801,0.637130828648193,1.30216690771284,0,0.602300476311091,0.639933055772092,0,0.473554504088034,0,2.21767417547206,5.34880391567015,1.88271725047639,0,0.670700859703636,0,0.361439152384566,1.50401373190767,0.144846518960824,0.795285947051099,0,0.0945348171640679,1.10864698731282,0.702678285545008,0.0654895377488563,0,0.370784442784429,0,0,0.664789802594326,0,1.14398982156026,0.371457501329565,0.198762407366705,0,0,0,0.838998872419812,2.20094433552054,0.417989933073621,0.258416759169329,0,1.00416183829401,0.402829317109147,0,2.19655851793353,0,4.86085168729056,0.267899184852239,0,0,0,0.949265659568129,0.732806975721629,1.31780417436063,0,0,0.496971951695318,1.13967460498122,0,0.860509862246441,1.06400514659507,0.560677600142307,1.06748995729705,1.48000529050296,0,0.404132016209064,0.490385709340376,0.605429710579726,1.72852777344,0,0,0,0.298897361103602,0.469737994575059,0,0.421352420106746,0,0.245668634623536,0.206651562351531,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0.438977620880838,1.22595118319608,0,0.113432183160021,0.717558542755448,0.427114777637135,0,0.900273288253207,0.309157587715317,0.257640540045629,0.558350568994769,1.0126579934476,1.65642908774038,0.252433774244115,0.0920498986422993,1.77810662500693,2.13005755509969,0.503760491138201,0.847802961552438,0,0,0.573609190778008,0,0,0,0.10366105501537,0,0,3.12899064659632,1.28648187638577,0,1.39310378409594,0,0.118306800039844,0.505754070234305,0.482022059766964,0.110293972732394,0,0,0,0,0,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0.219500570817251,0,0.201057944823262,0.185176890317059,0.325808305310325,0,1.44331342025273,0,0,0,0.462985512576611,0,2.37061319387782,0,0.738651018262192,0.234004265139238,0.594524649154913,0.93733833986777,0.335964256397719,0,0.0895585227028483,0,0,0.492663237895943,0.352193736052904,0.414656231081544,0.288239906833923,0.6312121671319,0.063497894292169,0.381988425558278,1.17217447210047,0,0,0.300343057843917,0,0.224262168690721,0,0,0.517086863031111,0,0.845302752556,0.26593811658487,1.04007436911366,0.771622122786426,0,0.266422179016099,0.142977993658148,1.08524321078289,0,0,0,0.791951872933429,0.602878754119172,0,0.099972991182057,1.2162378064119,2.00902836572851,4.21667878966063,0.958499421966331,0,0,0.579125226670317,0.821905290201534,0,0.112085143993527,1.77327684181734,2.80315847317372,1.02674429023799,0,0,0,0.167516265334349,0,3.74503511973591,0,1.24324654030811,0.24538298343828,0.500170521059677,0.271265023699736,0.623912584592421,1.07057393278297,0.315404830067869,0.117141414992713,0,2.27407504055985,0,0.664225598535437,0.184369168541703,0.173767228936166,0.391602314925481,0.343143423810856,0.413536052245775,2.15714200818617,1.17400313583789,0,1.66435439510497,0.604780586659361,0,0.460385919864187,1.40330047216537,0.640695746278505,1.02341449813341,0.321707842287215,0,0.771048469013278,0.887808626565635,0,0,0.813472649219715,0.120859449591622,0.601519410909855,0.276242966807689,0.34444334449382,0.910455840033585,0.393373244878272,0,0.308061348417659,2.35304930753057,0,0.211103257785751,1.13733384070897,0.850468526382578,0.215915916102139,1.54227252690289,0,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|short_description=p13@TGFB1 | |short_description=p13@TGFB1 | ||
}} | }} |
Latest revision as of 05:14, 18 September 2015
Short description: | p13@TGFB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TGFB1_5end |
Coexpression cluster: | C1822_CD14_CD8_Neutrophils_Natural_Renal_Endothelial_acute |
Association with transcript: | 316bp_to_BT007245_5end |
EntrezGene: | TGFB1 |
HGNC: | 11766 |
UniProt: | P01137 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.45e-49 | 48 |
phagocyte | 6.45e-49 | 48 |
classical monocyte | 9.35e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.35e-49 | 42 |
monopoietic cell | 1.69e-38 | 59 |
monocyte | 1.69e-38 | 59 |
monoblast | 1.69e-38 | 59 |
promonocyte | 1.69e-38 | 59 |
macrophage dendritic cell progenitor | 8.25e-37 | 61 |
myeloid leukocyte | 2.87e-36 | 72 |
myeloid lineage restricted progenitor cell | 4.90e-33 | 66 |
granulocyte monocyte progenitor cell | 2.38e-32 | 67 |
nongranular leukocyte | 1.62e-28 | 115 |
leukocyte | 2.93e-27 | 136 |
hematopoietic lineage restricted progenitor cell | 3.47e-24 | 120 |
myeloid cell | 8.07e-22 | 108 |
common myeloid progenitor | 8.07e-22 | 108 |
hematopoietic stem cell | 1.28e-20 | 168 |
hematopoietic oligopotent progenitor cell | 2.06e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-19 | 161 |
hematopoietic cell | 1.10e-18 | 177 |
mesenchymal cell | 4.92e-15 | 354 |
connective tissue cell | 2.72e-14 | 361 |
motile cell | 3.13e-12 | 386 |
multi fate stem cell | 1.13e-11 | 427 |
somatic stem cell | 3.52e-11 | 433 |
stem cell | 1.51e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.34e-28 | 98 |
blood island | 1.34e-28 | 98 |
bone marrow | 5.41e-27 | 76 |
hemolymphoid system | 1.12e-25 | 108 |
bone element | 1.75e-25 | 82 |
skeletal element | 4.52e-22 | 90 |
immune system | 7.99e-21 | 93 |
lateral plate mesoderm | 1.84e-20 | 203 |
skeletal system | 1.10e-19 | 100 |
connective tissue | 2.76e-13 | 371 |
mesoderm | 2.08e-11 | 315 |
mesoderm-derived structure | 2.08e-11 | 315 |
presumptive mesoderm | 2.08e-11 | 315 |
musculoskeletal system | 9.52e-11 | 167 |