FFCP PHASE1:Hg19::chr7:30029367..30029474,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9805 | |EntrezGene=9805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22192 | |HGNC=22192 | ||
|TSSclassifier=strong | |||
|UniProt=Q12765,B4DIP5 | |UniProt=Q12765,B4DIP5 | ||
|association_with_transcript=0bp_to_ENST00000242059,NM_001145515,NM_014766,uc003tak.2,uc011jzy.1_5end | |association_with_transcript=0bp_to_ENST00000242059,NM_001145515,NM_014766,uc003tak.2,uc011jzy.1_5end | ||
|cluster_id=chr7:30029367..30029474,- | |||
|description=CAGE_peak_1_at_SCRN1_5end | |description=CAGE_peak_1_at_SCRN1_5end | ||
|id=chr7:30029367..30029474,- | |id=chr7:30029367..30029474,- | ||
|ontology_enrichment_celltype=CL:0000055!1.49e-11!180;CL:0000133!4.99e-08!59;CL:0002321!3.53e-07!248;CL:0002319!5.61e-07!25;CL:0000220!6.86e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.49e-11!180;CL:0000133!4.99e-08!59;CL:0002321!3.53e-07!248;CL:0002319!5.61e-07!25;CL:0000220!6.86e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002319;5.91e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,4.95e-08,59;CL:0002321,1.74e-07,250;CL:0002319,5.57e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.09e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.00e-37!94;UBERON:0001016!1.00e-37!94;UBERON:0005743!1.36e-35!86;UBERON:0001017!2.34e-35!82;UBERON:0000955!1.51e-31!69;UBERON:0006238!1.51e-31!69;UBERON:0004121!4.74e-31!169;UBERON:0001049!9.19e-31!57;UBERON:0005068!9.19e-31!57;UBERON:0006241!9.19e-31!57;UBERON:0007135!9.19e-31!57;UBERON:0000924!2.68e-29!173;UBERON:0006601!2.68e-29!173;UBERON:0002616!9.10e-29!59;UBERON:0000033!6.87e-28!123;UBERON:0003075!7.09e-28!86;UBERON:0007284!7.09e-28!86;UBERON:0000153!1.92e-25!129;UBERON:0007811!1.92e-25!129;UBERON:0002346!2.49e-25!90;UBERON:0002780!1.14e-24!41;UBERON:0001890!1.14e-24!41;UBERON:0006240!1.14e-24!41;UBERON:0003080!3.71e-24!42;UBERON:0000475!5.43e-23!365;UBERON:0003056!1.43e-22!61;UBERON:0001893!2.92e-21!34;UBERON:0002020!2.94e-21!34;UBERON:0003528!2.94e-21!34;UBERON:0002791!1.33e-20!33;UBERON:0001869!5.60e-20!32;UBERON:0000483!1.62e-17!309;UBERON:0000119!2.65e-17!312;UBERON:0000956!1.23e-15!25;UBERON:0000203!1.23e-15!25;UBERON:0004111!3.92e-15!241;UBERON:0000025!8.20e-15!194;UBERON:0000481!1.21e-14!347;UBERON:0000477!1.50e-14!286;UBERON:0002619!4.59e-14!22;UBERON:0000064!5.38e-14!219;UBERON:0001950!6.05e-13!20;UBERON:0000468!1.10e-12!659;UBERON:0000922!6.63e-11!612;UBERON:0000467!4.41e-10!625;UBERON:0000480!8.94e-10!626;UBERON:0002050!1.32e-09!605;UBERON:0005423!1.32e-09!605;UBERON:0000923!1.94e-09!604;UBERON:0005291!1.94e-09!604;UBERON:0006598!1.94e-09!604;UBERON:0002532!1.94e-09!604;UBERON:0003076!9.01e-08!15;UBERON:0003057!9.01e-08!15;UBERON:0000062!1.65e-07!511;UBERON:0002420!4.07e-07!9;UBERON:0007245!4.07e-07!9;UBERON:0010009!4.07e-07!9;UBERON:0010011!4.07e-07!9;UBERON:0000454!4.07e-07!9;UBERON:0002308!4.30e-07!9;UBERON:0000125!4.30e-07!9 | |ontology_enrichment_uberon=UBERON:0000073!1.00e-37!94;UBERON:0001016!1.00e-37!94;UBERON:0005743!1.36e-35!86;UBERON:0001017!2.34e-35!82;UBERON:0000955!1.51e-31!69;UBERON:0006238!1.51e-31!69;UBERON:0004121!4.74e-31!169;UBERON:0001049!9.19e-31!57;UBERON:0005068!9.19e-31!57;UBERON:0006241!9.19e-31!57;UBERON:0007135!9.19e-31!57;UBERON:0000924!2.68e-29!173;UBERON:0006601!2.68e-29!173;UBERON:0002616!9.10e-29!59;UBERON:0000033!6.87e-28!123;UBERON:0003075!7.09e-28!86;UBERON:0007284!7.09e-28!86;UBERON:0000153!1.92e-25!129;UBERON:0007811!1.92e-25!129;UBERON:0002346!2.49e-25!90;UBERON:0002780!1.14e-24!41;UBERON:0001890!1.14e-24!41;UBERON:0006240!1.14e-24!41;UBERON:0003080!3.71e-24!42;UBERON:0000475!5.43e-23!365;UBERON:0003056!1.43e-22!61;UBERON:0001893!2.92e-21!34;UBERON:0002020!2.94e-21!34;UBERON:0003528!2.94e-21!34;UBERON:0002791!1.33e-20!33;UBERON:0001869!5.60e-20!32;UBERON:0000483!1.62e-17!309;UBERON:0000119!2.65e-17!312;UBERON:0000956!1.23e-15!25;UBERON:0000203!1.23e-15!25;UBERON:0004111!3.92e-15!241;UBERON:0000025!8.20e-15!194;UBERON:0000481!1.21e-14!347;UBERON:0000477!1.50e-14!286;UBERON:0002619!4.59e-14!22;UBERON:0000064!5.38e-14!219;UBERON:0001950!6.05e-13!20;UBERON:0000468!1.10e-12!659;UBERON:0000922!6.63e-11!612;UBERON:0000467!4.41e-10!625;UBERON:0000480!8.94e-10!626;UBERON:0002050!1.32e-09!605;UBERON:0005423!1.32e-09!605;UBERON:0000923!1.94e-09!604;UBERON:0005291!1.94e-09!604;UBERON:0006598!1.94e-09!604;UBERON:0002532!1.94e-09!604;UBERON:0003076!9.01e-08!15;UBERON:0003057!9.01e-08!15;UBERON:0000062!1.65e-07!511;UBERON:0002420!4.07e-07!9;UBERON:0007245!4.07e-07!9;UBERON:0010009!4.07e-07!9;UBERON:0010011!4.07e-07!9;UBERON:0000454!4.07e-07!9;UBERON:0002308!4.30e-07!9;UBERON:0000125!4.30e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.10e-18;34!UBERON:0003528;2.83e-18;34!UBERON:0002020;2.83e-18;34!UBERON:0002791;3.40e-18;32!UBERON:0001869;3.82e-18;32!UBERON:0002780;7.20e-18;41!UBERON:0001890;7.20e-18;41!UBERON:0000073;5.57e-17;53!UBERON:0002616;5.57e-17;53!UBERON:0000956;1.20e-15;25!UBERON:0000203;1.20e-15;25!UBERON:0000955;1.89e-14;68!UBERON:0002619;4.49e-14;22!UBERON:0001017;6.98e-14;75!UBERON:0001950;5.94e-13;20!UBERON:0001016;7.03e-13;83!UBERON:0011216;2.87e-07;132!UBERON:0002420;4.01e-07;9!UBERON:0007245;4.01e-07;9!UBERON:0010009;4.01e-07;9!UBERON:0010011;4.01e-07;9!UBERON:0000454;4.01e-07;9!UBERON:0000125;4.19e-07;9!UBERON:0002308;4.19e-07;9 | |||
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| ||
|short_description=p1@SCRN1 | |short_description=p1@SCRN1 | ||
}} | }} |
Latest revision as of 05:10, 18 September 2015
Short description: | p1@SCRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCRN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000242059, NM_001145515, NM_014766, uc003tak.2, uc011jzy.1_5end |
EntrezGene: | SCRN1 |
HGNC: | 22192 |
UniProt: | Q12765B4DIP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 4.95e-08 | 59 |
embryonic cell | 1.74e-07 | 250 |
neural cell | 5.57e-07 | 25 |