FFCP PHASE1:Hg19::chr2:70165396..70165410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4084 | |EntrezGene=4084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6761 | |HGNC=6761 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=112bp_to_ENST00000465446_5end | |association_with_transcript=112bp_to_ENST00000465446_5end | ||
|cluster_id=chr2:70165396..70165410,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_15_at_MXD1_5end | |description=CAGE_peak_15_at_MXD1_5end | ||
|id=chr2:70165396..70165410,+ | |id=chr2:70165396..70165410,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.72e-28!42;CL:0000860!1.33e-26!45;CL:0000766!2.39e-24!76;CL:0002194!1.71e-23!63;CL:0000576!1.71e-23!63;CL:0000040!1.71e-23!63;CL:0000559!1.71e-23!63;CL:0002009!1.87e-23!65;CL:0000839!1.36e-20!70;CL:0000557!5.08e-20!71;CL:0000763!2.05e-16!112;CL:0000049!2.05e-16!112;CL:0000738!1.50e-13!140;CL:0002087!2.25e-11!119;CL:0002031!8.11e-11!124;CL:0002032!5.38e-10!165;CL:0000837!5.38e-10!165;CL:0000037!6.57e-10!172;CL:0000566!6.57e-10!172;CL:0000988!2.98e-09!182 | |ontology_enrichment_celltype=CL:0002057!2.72e-28!42;CL:0000860!1.33e-26!45;CL:0000766!2.39e-24!76;CL:0002194!1.71e-23!63;CL:0000576!1.71e-23!63;CL:0000040!1.71e-23!63;CL:0000559!1.71e-23!63;CL:0002009!1.87e-23!65;CL:0000839!1.36e-20!70;CL:0000557!5.08e-20!71;CL:0000763!2.05e-16!112;CL:0000049!2.05e-16!112;CL:0000738!1.50e-13!140;CL:0002087!2.25e-11!119;CL:0002031!8.11e-11!124;CL:0002032!5.38e-10!165;CL:0000837!5.38e-10!165;CL:0000037!6.57e-10!172;CL:0000566!6.57e-10!172;CL:0000988!2.98e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-72;33!CL:0002057;1.03e-72;33!CL:0000473;5.47e-59;39!CL:0000234;5.47e-59;39!CL:0000576;1.26e-33;48!CL:0000766;7.27e-26;69!CL:0000775;8.89e-16;3!CL:0000763;2.32e-15;100!CL:0000094;2.40e-10;8!CL:0002087;7.34e-09;104!CL:0000738;7.79e-09;136!CL:0000081;1.56e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.14e-62,48;CL:0000234,4.14e-62,48;CL:0000860,4.46e-61,42;CL:0002057,4.46e-61,42;CL:0000766,1.78e-53,72;CL:0002194,1.67e-48,59;CL:0000576,1.67e-48,59;CL:0000040,1.67e-48,59;CL:0000559,1.67e-48,59;CL:0002009,9.49e-47,61;CL:0000839,8.10e-43,66;CL:0000557,4.22e-42,67;CL:0000763,3.47e-36,108;CL:0000049,3.47e-36,108;CL:0000738,2.11e-25,136;CL:0002087,3.14e-22,115;CL:0002032,3.95e-22,161;CL:0000837,3.95e-22,161;CL:0002031,4.57e-21,120;CL:0000037,6.23e-21,168;CL:0000988,1.57e-19,177;CL:0000775,5.43e-16,3;CL:0000094,1.89e-10,8;CL:0000081,1.32e-07,11;CL:0000134,4.01e-07,354;CL:0002320,7.43e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.89e-45;42!CL:0000049;1.33e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-22!102;UBERON:0003061!1.16e-22!102;UBERON:0002193!1.92e-19!112;UBERON:0002371!7.25e-17!80;UBERON:0001474!2.25e-15!86;UBERON:0004765!2.01e-13!101;UBERON:0001434!2.01e-13!101;UBERON:0002405!2.16e-12!115;UBERON:0002204!9.11e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!1.16e-22!102;UBERON:0003061!1.16e-22!102;UBERON:0002193!1.92e-19!112;UBERON:0002371!7.25e-17!80;UBERON:0001474!2.25e-15!86;UBERON:0004765!2.01e-13!101;UBERON:0001434!2.01e-13!101;UBERON:0002405!2.16e-12!115;UBERON:0002204!9.11e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.46e-24;15!UBERON:0000179;3.46e-24;15!UBERON:0000463;3.46e-24;15!UBERON:0002390;1.08e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-52,98;UBERON:0003061,1.66e-52,98;UBERON:0002193,4.95e-47,108;UBERON:0002371,1.73e-36,76;UBERON:0001474,2.02e-33,82;UBERON:0004765,5.82e-30,90;UBERON:0002405,8.13e-29,93;UBERON:0001434,2.08e-26,100;UBERON:0000178,2.52e-24,15;UBERON:0000179,2.52e-24,15;UBERON:0000463,2.52e-24,15;UBERON:0003081,9.41e-22,203;UBERON:0002204,1.55e-13,167;UBERON:0000926,2.19e-12,315;UBERON:0004120,2.19e-12,315;UBERON:0006603,2.19e-12,315 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,2.03557534291391,0.377875943688809,0.485168122375632,2.32429036905685,0.822335776043652,1.23882548358041,2.8769239232215,2.30544635876191,0.709446689665756,4.48169384957604,2.5819387343353,2.70852973188684,3.9530891303947,1.09162460023138,0.674170453335254,11.3251040177234,2.24650318953266,11.5080682643827,0.659702600373432,1.99463657621632,3.83602275479425,4.35313857942876,2.26954089876456,1.24564449799115,1.25624332628372,1.0429658368404,1.3031330682307,1.21079900526674,1.10483290796269,2.21523671208619,0.211255286311942,0,0,0.22465726229299,0.450530678524519,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0.364295288292542,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,11.9841123831549,32.9077605124427,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.320182673410333,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0.200506470303285,0.368323955743585,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0.661139661443912,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,1.52234282769651,1.52927441428475,3.98753031021914,1.19115887728894,1.23408681925858,1.29694662238543,1.08006287447623,4.75875105776562,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0.278847488557207,0,0.227884111694002,0,0.0897576444097721,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.195984794828755,0,0.17472666824203,0,0.0967563312890851,0,0,0.872901148395775,0,0,0,0,0.0633107959558787,0.391102765469606,0,0,0.999048047910651,0.144090417154106,0,0,0.576219191952599,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0.468334905806882,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0.261906694481422,0,0,0,0.781078098613847,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0.236664001461131,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0.205325613712494,0,0,0,0,0.237840181555137,0,0.219881033490858,0.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| 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| ||
|short_description=p15@MXD1 | |short_description=p15@MXD1 | ||
}} | }} |
Latest revision as of 05:00, 18 September 2015
Short description: | p15@MXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_MXD1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 112bp_to_ENST00000465446_5end |
EntrezGene: | MXD1 |
HGNC: | 6761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.14e-62 | 48 |
phagocyte | 4.14e-62 | 48 |
classical monocyte | 4.46e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.46e-61 | 42 |
myeloid leukocyte | 1.78e-53 | 72 |
monopoietic cell | 1.67e-48 | 59 |
monocyte | 1.67e-48 | 59 |
monoblast | 1.67e-48 | 59 |
promonocyte | 1.67e-48 | 59 |
macrophage dendritic cell progenitor | 9.49e-47 | 61 |
myeloid lineage restricted progenitor cell | 8.10e-43 | 66 |
granulocyte monocyte progenitor cell | 4.22e-42 | 67 |
myeloid cell | 3.47e-36 | 108 |
common myeloid progenitor | 3.47e-36 | 108 |
leukocyte | 2.11e-25 | 136 |
nongranular leukocyte | 3.14e-22 | 115 |
hematopoietic oligopotent progenitor cell | 3.95e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.95e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 4.57e-21 | 120 |
hematopoietic stem cell | 6.23e-21 | 168 |
hematopoietic cell | 1.57e-19 | 177 |
neutrophil | 5.43e-16 | 3 |
granulocyte | 1.89e-10 | 8 |
blood cell | 1.32e-07 | 11 |
mesenchymal cell | 4.01e-07 | 354 |
connective tissue cell | 7.43e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.66e-52 | 98 |
blood island | 1.66e-52 | 98 |
hemolymphoid system | 4.95e-47 | 108 |
bone marrow | 1.73e-36 | 76 |
bone element | 2.02e-33 | 82 |
skeletal element | 5.82e-30 | 90 |
immune system | 8.13e-29 | 93 |
skeletal system | 2.08e-26 | 100 |
blood | 2.52e-24 | 15 |
haemolymphatic fluid | 2.52e-24 | 15 |
organism substance | 2.52e-24 | 15 |
lateral plate mesoderm | 9.41e-22 | 203 |
musculoskeletal system | 1.55e-13 | 167 |
mesoderm | 2.19e-12 | 315 |
mesoderm-derived structure | 2.19e-12 | 315 |
presumptive mesoderm | 2.19e-12 | 315 |